RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
UBE3D-204ENST00000430071 NBDYA0A0U1RRE5 68 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 TMEM218A2RU14 115 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 NXPH4O95158 308 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 FHL2Q14192 279 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 ESRGQ1W209 222 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 C1orf134Q5TEV5 83 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 SYT8Q8NBV8 401 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 SFRP2Q96HF1 295 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 TPPP3Q9BW30 176 aa11.71□□□□□ -0.53
UBE3D-204ENST00000430071 ADCYAP1P18509 176 aa11.7□□□□□ -0.54
UBE3D-204ENST00000430071 FAM3BP58499 235 aaPredicted RBP11.7□□□□□ -0.54
UBE3D-204ENST00000430071 ZFP82Q8N141 532 aa11.7□□□□□ -0.54
UBE3D-204ENST00000430071 GTSF1Q8WW33 167 aa11.7□□□□□ -0.54
UBE3D-204ENST00000430071 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
UBE3D-204ENST00000430071 CCL18P55774 89 aa11.69□□□□□ -0.54
UBE3D-204ENST00000430071 SSTP61278 116 aa11.69□□□□□ -0.54
UBE3D-204ENST00000430071 TNP2Q05952 138 aa11.69□□□□□ -0.54
UBE3D-204ENST00000430071 CT83Q5H943 113 aa11.69□□□□□ -0.54
UBE3D-204ENST00000430071 LYZL1Q6UWQ5 148 aa11.69□□□□□ -0.54
UBE3D-204ENST00000430071 SAMD10Q9BYL1 202 aa11.69□□□□□ -0.54
UBE3D-204ENST00000430071 V9GYV3 84 aa11.69□□□□□ -0.54
UBE3D-204ENST00000430071 A0A1W2PPQ1 181 aa11.68□□□□□ -0.54
UBE3D-204ENST00000430071 A8MWV9 139 aa11.68□□□□□ -0.54
UBE3D-204ENST00000430071 CTRLP40313 264 aa11.68□□□□□ -0.54
UBE3D-204ENST00000430071 C15orf54Q8N8G6 183 aa11.68□□□□□ -0.54
UBE3D-204ENST00000430071 A0A096LPF7 62 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 IGHV3-73A0A0B4J1V6 119 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 TRGV4A0A0C4DH28 118 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 A8MWL6 223 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 F2Z2F3 143 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 UFSP1Q6NVU6 142 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 OR10G8Q8NGN5 311 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 CRYGDP07320 174 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 CRYBA4P53673 196 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 Q9H8V8 135 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 MSRB1Q9NZV6 116 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 PRO0255Q9UI72 69 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
UBE3D-204ENST00000430071 A0A087WWL8 130 aa11.66□□□□□ -0.54
UBE3D-204ENST00000430071 F8W036 122 aa11.66□□□□□ -0.54
UBE3D-204ENST00000430071 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
UBE3D-204ENST00000430071 H3BNG1 76 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 PAX4O43316 350 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 FOXA3P55318 350 aaPredicted RBP11.65□□□□□ -0.55
UBE3D-204ENST00000430071 CACNG7P62955 275 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 PNRC1Q12796 327 aaPredicted RBP11.65□□□□□ -0.55
UBE3D-204ENST00000430071 SLAQ13239 276 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 ZFP2Q6ZN57 461 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 Q6ZSN1 163 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 C6orf223Q8N319 242 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 PGLYRP4Q96LB8 373 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 SEC11CQ9BY50 192 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 CNFNQ9BYD5 112 aa11.65□□□□□ -0.55
UBE3D-204ENST00000430071 CIDEAO60543 219 aa11.64□□□□□ -0.55
UBE3D-204ENST00000430071 NTF3P20783 257 aa11.64□□□□□ -0.55
UBE3D-204ENST00000430071 FAM74A4Q5TZK3 123 aa11.64□□□□□ -0.55
UBE3D-204ENST00000430071 WDR73Q6P4I2 378 aa11.64□□□□□ -0.55
UBE3D-204ENST00000430071 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
UBE3D-204ENST00000430071 PCLOQ9Y6V0 5065 aa11.63□□□□□ -0.55
UBE3D-204ENST00000430071 RYR1P21817 5038 aa11.63□□□□□ -0.55
UBE3D-204ENST00000430071 FAM231BA6NCW3 169 aa11.63□□□□□ -0.55
UBE3D-204ENST00000430071 HIGD1CA8MV81 97 aa11.63□□□□□ -0.55
UBE3D-204ENST00000430071 SLC25A29Q8N8R3 303 aa11.63□□□□□ -0.55
UBE3D-204ENST00000430071 MRPS16Q9Y3D3 137 aaKnown RBP11.63□□□□□ -0.55
UBE3D-204ENST00000430071 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
UBE3D-204ENST00000430071 RHODO00212 210 aa11.62□□□□□ -0.55
UBE3D-204ENST00000430071 C10orf91Q5T1B1 145 aa11.62□□□□□ -0.55
UBE3D-204ENST00000430071 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
UBE3D-204ENST00000430071 AP1S3Q96PC3 154 aa11.62□□□□□ -0.55
UBE3D-204ENST00000430071 UPK3BQ9BT76 320 aa11.62□□□□□ -0.55
UBE3D-204ENST00000430071 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
UBE3D-204ENST00000430071 TRBV6-4A0A1B0GX49 114 aa11.61□□□□□ -0.55
UBE3D-204ENST00000430071 SMIM27A0A1W2PRY6 76 aa11.6□□□□□ -0.55
UBE3D-204ENST00000430071 LINC00315P59091 139 aa11.6□□□□□ -0.55
UBE3D-204ENST00000430071 TWIST1Q15672 202 aa11.6□□□□□ -0.55
UBE3D-204ENST00000430071 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
UBE3D-204ENST00000430071 Q9UF83 564 aa11.6□□□□□ -0.55
UBE3D-204ENST00000430071 CARHSP1Q9Y2V2 147 aaKnown RBP11.6□□□□□ -0.55
UBE3D-204ENST00000430071 K7EQD1 137 aa11.59□□□□□ -0.55
UBE3D-204ENST00000430071 GYPEP15421 78 aa11.59□□□□□ -0.55
UBE3D-204ENST00000430071 EVI2AP22794 236 aa11.59□□□□□ -0.55
UBE3D-204ENST00000430071 NAT8BQ9UHF3 227 aa11.59□□□□□ -0.55
UBE3D-204ENST00000430071 ICOSQ9Y6W8 199 aa11.59□□□□□ -0.55
UBE3D-204ENST00000430071 A0A1B0GUT8 65 aa11.58□□□□□ -0.56
UBE3D-204ENST00000430071 PPP1R2P9O14990 202 aa11.58□□□□□ -0.56
UBE3D-204ENST00000430071 MT-ND4LP03901 98 aa11.58□□□□□ -0.56
UBE3D-204ENST00000430071 TRGC1P0CF51 173 aa11.58□□□□□ -0.56
UBE3D-204ENST00000430071 RHOHQ15669 191 aa11.58□□□□□ -0.56
UBE3D-204ENST00000430071 SLC7A5P1Q8MH63 180 aa11.58□□□□□ -0.56
UBE3D-204ENST00000430071 LRP1BQ9NZR2 4599 aa11.57□□□□□ -0.56
UBE3D-204ENST00000430071 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
UBE3D-204ENST00000430071 ZNF56Q15929 161 aa11.57□□□□□ -0.56
UBE3D-204ENST00000430071 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
UBE3D-204ENST00000430071 PRADC1Q9BSG0 188 aa11.57□□□□□ -0.56
UBE3D-204ENST00000430071 RAB4BP61018 213 aa11.56□□□□□ -0.56
UBE3D-204ENST00000430071 LYPD5Q6UWN5 251 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms