RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 M0R381 172 aa12.35□□□□□ -0.43
PSPC1-202ENST00000427943 TPT1P13693 172 aaKnown RBP12.35□□□□□ -0.43
PSPC1-202ENST00000427943 Q8N3U1 123 aa12.35□□□□□ -0.43
PSPC1-202ENST00000427943 SCRT2Q9NQ03 307 aa12.35□□□□□ -0.43
PSPC1-202ENST00000427943 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
PSPC1-202ENST00000427943 A0A087WWL8 130 aa12.34□□□□□ -0.43
PSPC1-202ENST00000427943 RHODO00212 210 aa12.34□□□□□ -0.43
PSPC1-202ENST00000427943 PFDN1O60925 122 aa12.34□□□□□ -0.43
PSPC1-202ENST00000427943 H2AFB1P0C5Y9 115 aa12.33□□□□□ -0.44
PSPC1-202ENST00000427943 RPL19P84098 196 aaKnown RBP12.33□□□□□ -0.44
PSPC1-202ENST00000427943 TMUB2Q71RG4 321 aa12.33□□□□□ -0.44
PSPC1-202ENST00000427943 SFRP2Q96HF1 295 aa12.33□□□□□ -0.44
PSPC1-202ENST00000427943 KRTAP10-1P60331 282 aa12.32□□□□□ -0.44
PSPC1-202ENST00000427943 ZFP82Q8N141 532 aa12.32□□□□□ -0.44
PSPC1-202ENST00000427943 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
PSPC1-202ENST00000427943 LRCOL1A6NCL2 159 aa12.31□□□□□ -0.44
PSPC1-202ENST00000427943 EIF5AP63241 154 aaKnown RBP12.31□□□□□ -0.44
PSPC1-202ENST00000427943 S100A9P06702 114 aaKnown RBP12.3□□□□□ -0.44
PSPC1-202ENST00000427943 LAGE3Q14657 143 aa12.29□□□□□ -0.44
PSPC1-202ENST00000427943 PRR27Q6MZM9 219 aa12.29□□□□□ -0.44
PSPC1-202ENST00000427943 BAGE2Q86Y30 109 aa12.29□□□□□ -0.44
PSPC1-202ENST00000427943 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
PSPC1-202ENST00000427943 XGP55808 180 aa12.28□□□□□ -0.44
PSPC1-202ENST00000427943 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
PSPC1-202ENST00000427943 OR10AG1Q8NH19 301 aa12.28□□□□□ -0.44
PSPC1-202ENST00000427943 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
PSPC1-202ENST00000427943 GNG13Q9P2W3 67 aa12.28□□□□□ -0.44
PSPC1-202ENST00000427943 A0A087WWC5 75 aa12.27□□□□□ -0.45
PSPC1-202ENST00000427943 IGLV5-52A0A0A0MRZ9 124 aa12.27□□□□□ -0.45
PSPC1-202ENST00000427943 GCSHP23434 173 aa12.27□□□□□ -0.45
PSPC1-202ENST00000427943 CCL20P78556 96 aa12.27□□□□□ -0.45
PSPC1-202ENST00000427943 MUC21A0A0G2JKD1 596 aa12.26□□□□□ -0.45
PSPC1-202ENST00000427943 MUC21A0A140T8X8 626 aa12.26□□□□□ -0.45
PSPC1-202ENST00000427943 Q8N814 137 aa12.26□□□□□ -0.45
PSPC1-202ENST00000427943 DERL1Q9BUN8 251 aa12.26□□□□□ -0.45
PSPC1-202ENST00000427943 MANBALQ9NQG1 85 aa12.26□□□□□ -0.45
PSPC1-202ENST00000427943 CXCL1P09341 107 aa12.25□□□□□ -0.45
PSPC1-202ENST00000427943 RPL35P42766 123 aaKnown RBP12.25□□□□□ -0.45
PSPC1-202ENST00000427943 ZNF56Q15929 161 aa12.25□□□□□ -0.45
PSPC1-202ENST00000427943 SNAI2O43623 268 aa12.24□□□□□ -0.45
PSPC1-202ENST00000427943 SSTP61278 116 aa12.24□□□□□ -0.45
PSPC1-202ENST00000427943 HAMPP81172 84 aa12.24□□□□□ -0.45
PSPC1-202ENST00000427943 RPL36AP83881 106 aaKnown RBP12.24□□□□□ -0.45
PSPC1-202ENST00000427943 WFDC2Q14508 124 aa12.24□□□□□ -0.45
PSPC1-202ENST00000427943 RPL36ALQ969Q0 106 aaKnown RBP12.24□□□□□ -0.45
PSPC1-202ENST00000427943 C11orf52Q96A22 123 aa12.24□□□□□ -0.45
PSPC1-202ENST00000427943 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
PSPC1-202ENST00000427943 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
PSPC1-202ENST00000427943 EPM2AB3EWF7 344 aa12.23□□□□□ -0.45
PSPC1-202ENST00000427943 UBE2D3P61077 147 aa12.23□□□□□ -0.45
PSPC1-202ENST00000427943 UBE2D2P62837 147 aa12.23□□□□□ -0.45
PSPC1-202ENST00000427943 NIT1Q86X76 327 aa12.23□□□□□ -0.45
PSPC1-202ENST00000427943 NTN5Q8WTR8 489 aaPredicted RBP12.23□□□□□ -0.45
PSPC1-202ENST00000427943 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
PSPC1-202ENST00000427943 TRAV8-3A0A0A6YYJ7 113 aa12.22□□□□□ -0.45
PSPC1-202ENST00000427943 TRAV1-1A0A0B4J248 108 aa12.22□□□□□ -0.45
PSPC1-202ENST00000427943 LECT2O14960 151 aa12.22□□□□□ -0.45
PSPC1-202ENST00000427943 CENPWQ5EE01 88 aa12.22□□□□□ -0.45
PSPC1-202ENST00000427943 TOR2AQ5JU69 321 aa12.22□□□□□ -0.45
PSPC1-202ENST00000427943 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
PSPC1-202ENST00000427943 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 OR5AL1P0C617 328 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 SULT1A2P50226 295 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 RAB5CP51148 216 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 RAB4BP61018 213 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 EIF5AL1Q6IS14 154 aaKnown RBP12.21□□□□□ -0.45
PSPC1-202ENST00000427943 TCTE3Q8IZS6 198 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 DNAJC30Q96LL9 226 aa12.21□□□□□ -0.45
PSPC1-202ENST00000427943 SSBP4Q9BWG4 385 aaPredicted RBP12.21□□□□□ -0.45
PSPC1-202ENST00000427943 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
PSPC1-202ENST00000427943 TEX46H3BTG2 121 aa12.19□□□□□ -0.46
PSPC1-202ENST00000427943 IGLV2-8P01709 118 aa12.19□□□□□ -0.46
PSPC1-202ENST00000427943 GZMBP10144 247 aa12.19□□□□□ -0.46
PSPC1-202ENST00000427943 Q5VSD8 79 aa12.19□□□□□ -0.46
PSPC1-202ENST00000427943 OR10G8Q8NGN5 311 aa12.19□□□□□ -0.46
PSPC1-202ENST00000427943 A0A087WX48 190 aa12.18□□□□□ -0.46
PSPC1-202ENST00000427943 RAB19A4D1S5 217 aa12.18□□□□□ -0.46
PSPC1-202ENST00000427943 RBFOX3A6NFN3 312 aa12.18□□□□□ -0.46
PSPC1-202ENST00000427943 F5H697 171 aa12.18□□□□□ -0.46
PSPC1-202ENST00000427943 SMR3BP02814 79 aaPredicted RBP12.18□□□□□ -0.46
PSPC1-202ENST00000427943 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
PSPC1-202ENST00000427943 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
PSPC1-202ENST00000427943 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.17□□□□□ -0.46
PSPC1-202ENST00000427943 IGKV2D-24A0A075B6R9 120 aa12.17□□□□□ -0.46
PSPC1-202ENST00000427943 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
PSPC1-202ENST00000427943 FRZBQ92765 325 aa12.17□□□□□ -0.46
PSPC1-202ENST00000427943 AP1S3Q96PC3 154 aa12.17□□□□□ -0.46
PSPC1-202ENST00000427943 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 IFNA1P01562 189 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 C1QBP02746 253 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 GNG4P50150 75 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 KCNIP4Q6PIL6 250 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 SLC51BQ86UW2 128 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 OR2D3Q8NGH3 330 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 RMI2Q96E14 147 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 DAZAP1Q96EP5 407 aaKnown RBP12.16□□□□□ -0.46
PSPC1-202ENST00000427943 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
PSPC1-202ENST00000427943 KIF25-AS1Q9Y6Z4 181 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms