RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 FAM74A4Q5TZK3 123 aa0.15□□□□□ -2.39
GCFC2-203ENST00000427862 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.15□□□□□ -2.39
GCFC2-203ENST00000427862 VSTM2AQ8TAG5 236 aa0.15□□□□□ -2.39
GCFC2-203ENST00000427862 SMIM11BQ8TCY0 68 aa0.15□□□□□ -2.39
GCFC2-203ENST00000427862 NDUFA12Q9UI09 145 aa0.15□□□□□ -2.39
GCFC2-203ENST00000427862 CADP27708 2225 aa0.15□□□□□ -2.39
GCFC2-203ENST00000427862 DMBT1Q9UGM3 2413 aaPredicted RBP0.15□□□□□ -2.39
GCFC2-203ENST00000427862 IGF2RP11717 2491 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 SOGA1O94964 1423 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 TRAV12-3A0A0B4J271 114 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 FAM236AA0A1B0GUQ0 79 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 FAM236BA0A1B0GV22 79 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 ARPC5O15511 151 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 SPINK1P00995 79 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 Q5BKY6 102 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 C20orf197Q8N268 126 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 COX7B2Q8TF08 81 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 LZICQ8WZA0 190 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 TMEM242Q9NWH2 141 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 ARHGEF10O15013 1369 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 SYNJ1O43426 1573 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 F5P12259 2224 aa0.14□□□□□ -2.39
GCFC2-203ENST00000427862 POLQO75417 2590 aa0.13□□□□□ -2.39
GCFC2-203ENST00000427862 IGSF10Q6WRI0 2623 aa0.13□□□□□ -2.39
GCFC2-203ENST00000427862 SPANXN1Q5VSR9 72 aa0.13□□□□□ -2.39
GCFC2-203ENST00000427862 SLC48A1Q6P1K1 146 aa0.13□□□□□ -2.39
GCFC2-203ENST00000427862 SMIM3Q9BZL3 60 aa0.13□□□□□ -2.39
GCFC2-203ENST00000427862 V9GYV3 84 aa0.13□□□□□ -2.39
GCFC2-203ENST00000427862 CASZ1Q86V15 1759 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 TRBV7-1A0A0A6YYK4 115 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 M0R2Z0 102 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 NCR2O95944 276 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 APODP05090 189 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 COX6A2Q02221 97 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 MIC13Q5XKP0 118 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 CTAGE3PQ8IX95 158 aa0.12□□□□□ -2.39
GCFC2-203ENST00000427862 MACF1Q9UPN3 7388 aaKnown RBP0.11□□□□□ -2.39
GCFC2-203ENST00000427862 PIRTP0C851 137 aa0.11□□□□□ -2.39
GCFC2-203ENST00000427862 LINC00694P0DN24 101 aa0.11□□□□□ -2.39
GCFC2-203ENST00000427862 NCOR2Q9Y618 2525 aa0.11□□□□□ -2.39
GCFC2-203ENST00000427862 M0R129 80 aa0.1□□□□□ -2.39
GCFC2-203ENST00000427862 Q96NJ1 140 aa0.1□□□□□ -2.39
GCFC2-203ENST00000427862 ASXL3Q9C0F0 2248 aa0.09□□□□□ -2.39
GCFC2-203ENST00000427862 NMBP08949 121 aa0.09□□□□□ -2.4
GCFC2-203ENST00000427862 ALX1Q15699 326 aa0.09□□□□□ -2.4
GCFC2-203ENST00000427862 C9orf116Q5BN46 136 aaPredicted RBP0.09□□□□□ -2.4
GCFC2-203ENST00000427862 RPRMQ9NS64 109 aa0.09□□□□□ -2.4
GCFC2-203ENST00000427862 A6NIN4 97 aa0.08□□□□□ -2.4
GCFC2-203ENST00000427862 K7ERU9 68 aa0.08□□□□□ -2.4
GCFC2-203ENST00000427862 RPL7L1Q6DKI1 246 aaKnown RBP0.08□□□□□ -2.4
GCFC2-203ENST00000427862 PSMG3Q9BT73 122 aaPredicted RBP0.08□□□□□ -2.4
GCFC2-203ENST00000427862 SCP2D1Q9UJQ7 156 aa0.08□□□□□ -2.4
GCFC2-203ENST00000427862 MAP2P11137 1827 aaKnown RBP0.08□□□□□ -2.4
GCFC2-203ENST00000427862 LAMC3Q9Y6N6 1575 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 PRG4Q92954 1404 aaPredicted RBP0.07□□□□□ -2.4
GCFC2-203ENST00000427862 PITX3O75364 302 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 ACYP2P14621 99 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 SCIMPQ6UWF3 145 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 Q6ZRX8 168 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 Q6ZUT4 128 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 FAM213BQ8TBF2 198 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 MAFIPQ8WZ33 124 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 COPZ2Q9P299 210 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 ZNF142P52746 1687 aaPredicted RBP0.07□□□□□ -2.4
GCFC2-203ENST00000427862 PLXNA2O75051 1894 aa0.07□□□□□ -2.4
GCFC2-203ENST00000427862 VIRMAQ69YN4 1812 aaKnown RBP0.06□□□□□ -2.4
GCFC2-203ENST00000427862 TMEM14DPA8MWL7 114 aa0.06□□□□□ -2.4
GCFC2-203ENST00000427862 NPFFO15130 113 aa0.06□□□□□ -2.4
GCFC2-203ENST00000427862 IFNA17P01571 189 aa0.06□□□□□ -2.4
GCFC2-203ENST00000427862 RRAS2P62070 204 aaPredicted RBP0.06□□□□□ -2.4
GCFC2-203ENST00000427862 UNC13BO14795 1591 aa0.06□□□□□ -2.4
GCFC2-203ENST00000427862 CACNA1CQ13936 2221 aa0.05□□□□□ -2.4
GCFC2-203ENST00000427862 EDDM3BP56851 147 aa0.05□□□□□ -2.4
GCFC2-203ENST00000427862 TSTD1Q8NFU3 115 aa0.05□□□□□ -2.4
GCFC2-203ENST00000427862 ANP32BQ92688 251 aaKnown RBP0.05□□□□□ -2.4
GCFC2-203ENST00000427862 OTOGQ6ZRI0 2925 aa0.05□□□□□ -2.4
GCFC2-203ENST00000427862 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
GCFC2-203ENST00000427862 TMEM2Q9UHN6 1383 aa0.05□□□□□ -2.4
GCFC2-203ENST00000427862 HIVEP3Q5T1R4 2406 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 TRGV1A0A0A0MS02 117 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 LOC105371267A0A1B0GV96 52 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 IL5P05113 134 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 PIPP12273 146 aaPredicted RBP0.04□□□□□ -2.4
GCFC2-203ENST00000427862 GCHFRP30047 84 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 UBE2G1P62253 170 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 INSL4Q14641 139 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 SMIM21Q3B7S5 101 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 C10orf82Q8WW14 230 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 NEBP20929 6669 aa0.04□□□□□ -2.4
GCFC2-203ENST00000427862 IBTKQ9P2D0 1353 aaPredicted RBP0.04□□□□□ -2.4
GCFC2-203ENST00000427862 SSC5DA1L4H1 1573 aa0.03□□□□□ -2.4
GCFC2-203ENST00000427862 GUCA1AP43080 201 aaPredicted RBP0.03□□□□□ -2.4
GCFC2-203ENST00000427862 UBE2D1P51668 147 aa0.03□□□□□ -2.4
GCFC2-203ENST00000427862 TNS1Q9HBL0 1735 aaKnown RBP0.03□□□□□ -2.4
GCFC2-203ENST00000427862 UNC79Q9P2D8 2635 aa0.03□□□□□ -2.4
GCFC2-203ENST00000427862 KIF13AQ9H1H9 1805 aa0.03□□□□□ -2.4
GCFC2-203ENST00000427862 FHAD1B1AJZ9 1412 aa0.03□□□□□ -2.41
GCFC2-203ENST00000427862 DAPK1P53355 1430 aa0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms