RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 GAGE12JA6NER3 117 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 SNAI2O43623 268 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 GAGE1Q13065 139 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 GAGE4Q13068 117 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 GAGE5Q13069 117 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 GAGE13Q4V321 117 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 TCTE3Q8IZS6 198 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 C10orf126Q8N4M7 172 aa10.63□□□□□ -0.71
HLA-DQB2-230ENST00000427449 TRBV20OR9-2A0A075B6H5 130 aa10.62□□□□□ -0.71
HLA-DQB2-230ENST00000427449 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
HLA-DQB2-230ENST00000427449 A0A087WWL8 130 aa10.62□□□□□ -0.71
HLA-DQB2-230ENST00000427449 H2AFB1P0C5Y9 115 aa10.62□□□□□ -0.71
HLA-DQB2-230ENST00000427449 OR10AG1Q8NH19 301 aa10.62□□□□□ -0.71
HLA-DQB2-230ENST00000427449 RHODO00212 210 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 TPT1P13693 172 aaKnown RBP10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 LAGE3Q14657 143 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 PRR27Q6MZM9 219 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 Q6ZNX1 250 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
HLA-DQB2-230ENST00000427449 SULT1A2P50226 295 aa10.6□□□□□ -0.71
HLA-DQB2-230ENST00000427449 OR10J3Q5JRS4 329 aa10.6□□□□□ -0.71
HLA-DQB2-230ENST00000427449 M0R381 172 aa10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 RPL35P42766 123 aaKnown RBP10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 UBE2D3P61077 147 aa10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 UBE2D2P62837 147 aa10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 DAZ4Q86SG3 579 aaKnown RBP10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 ZFP82Q8N141 532 aa10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 OR10G8Q8NGN5 311 aa10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 DAZ3Q9NR90 486 aaKnown RBP10.59□□□□□ -0.71
HLA-DQB2-230ENST00000427449 TRAV8-6A0A0B4J262 113 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 S100A9P06702 114 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 BAGE2Q86Y30 109 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 MANBALQ9NQG1 85 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 PHLDA3Q9Y5J5 127 aa10.58□□□□□ -0.72
HLA-DQB2-230ENST00000427449 MYCBP2O75592 4640 aa10.57□□□□□ -0.72
HLA-DQB2-230ENST00000427449 C1QBP02746 253 aa10.57□□□□□ -0.72
HLA-DQB2-230ENST00000427449 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
HLA-DQB2-230ENST00000427449 NIT1Q86X76 327 aa10.57□□□□□ -0.72
HLA-DQB2-230ENST00000427449 Q8N814 137 aa10.57□□□□□ -0.72
HLA-DQB2-230ENST00000427449 Q9HAA7 133 aa10.57□□□□□ -0.72
HLA-DQB2-230ENST00000427449 GNG13Q9P2W3 67 aa10.57□□□□□ -0.72
HLA-DQB2-230ENST00000427449 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
HLA-DQB2-230ENST00000427449 CENPWQ5EE01 88 aa10.56□□□□□ -0.72
HLA-DQB2-230ENST00000427449 C9orf62Q8N4C0 152 aa10.56□□□□□ -0.72
HLA-DQB2-230ENST00000427449 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
HLA-DQB2-230ENST00000427449 PFDN1O60925 122 aa10.55□□□□□ -0.72
HLA-DQB2-230ENST00000427449 EIF5AP63241 154 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB2-230ENST00000427449 SRRM2Q9UQ35 2752 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB2-230ENST00000427449 MUC21A0A0G2JKD1 596 aa10.54□□□□□ -0.72
HLA-DQB2-230ENST00000427449 MUC21A0A140T8X8 626 aa10.54□□□□□ -0.72
HLA-DQB2-230ENST00000427449 RAB5CP51148 216 aa10.54□□□□□ -0.72
HLA-DQB2-230ENST00000427449 ATRAIDQ6UW56 229 aa10.54□□□□□ -0.72
HLA-DQB2-230ENST00000427449 FAM30AQ9NZY2 134 aa10.54□□□□□ -0.72
HLA-DQB2-230ENST00000427449 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
HLA-DQB2-230ENST00000427449 A0A087WWC5 75 aa10.53□□□□□ -0.72
HLA-DQB2-230ENST00000427449 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
HLA-DQB2-230ENST00000427449 GZMBP10144 247 aa10.53□□□□□ -0.72
HLA-DQB2-230ENST00000427449 RAB4BP61018 213 aa10.53□□□□□ -0.72
HLA-DQB2-230ENST00000427449 MEF2BQ02080 365 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB2-230ENST00000427449 Q6ZSA8 131 aa10.53□□□□□ -0.72
HLA-DQB2-230ENST00000427449 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
HLA-DQB2-230ENST00000427449 TRBV7-3A0A075B6L6 115 aa10.52□□□□□ -0.73
HLA-DQB2-230ENST00000427449 EREGO14944 169 aa10.52□□□□□ -0.73
HLA-DQB2-230ENST00000427449 BCL2P10415 239 aa10.52□□□□□ -0.73
HLA-DQB2-230ENST00000427449 GCSHP23434 173 aa10.52□□□□□ -0.73
HLA-DQB2-230ENST00000427449 HAMPP81172 84 aa10.52□□□□□ -0.73
HLA-DQB2-230ENST00000427449 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB2-230ENST00000427449 RBFOX3A6NFN3 312 aa10.51□□□□□ -0.73
HLA-DQB2-230ENST00000427449 SLC51BQ86UW2 128 aa10.51□□□□□ -0.73
HLA-DQB2-230ENST00000427449 VAX2Q9UIW0 290 aa10.51□□□□□ -0.73
HLA-DQB2-230ENST00000427449 HERC1Q15751 4861 aa10.5□□□□□ -0.73
HLA-DQB2-230ENST00000427449 LYPD6BQ8NI32 183 aa10.5□□□□□ -0.73
HLA-DQB2-230ENST00000427449 SMIM12Q96EX1 92 aa10.5□□□□□ -0.73
HLA-DQB2-230ENST00000427449 TRBV6-8A0A0A6YYG3 113 aa10.49□□□□□ -0.73
HLA-DQB2-230ENST00000427449 K7EN84 100 aa10.49□□□□□ -0.73
HLA-DQB2-230ENST00000427449 TMEM70Q9BUB7 260 aa10.49□□□□□ -0.73
HLA-DQB2-230ENST00000427449 IGLV5-52A0A0A0MRZ9 124 aa10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 PSCAO43653 123 aa10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 ZNF56Q15929 161 aa10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
HLA-DQB2-230ENST00000427449 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 M0QY20 66 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 LECT2O14960 151 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 PDE6DO43924 150 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms