RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 OR2D3Q8NGH3 330 aa15.25■□□□□ 0.03
PTCHD3P2-201ENST00000424937 BIN3Q9NQY0 253 aa15.25■□□□□ 0.03
PTCHD3P2-201ENST00000424937 GAGE12JA6NER3 117 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 CRYGDP07320 174 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 GZMBP10144 247 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 TIRAPP58753 221 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 GAGE1Q13065 139 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 GAGE4Q13068 117 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 GAGE5Q13069 117 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 GAGE13Q4V321 117 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 SPANXN1Q5VSR9 72 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 LY96Q9Y6Y9 160 aa15.24■□□□□ 0.03
PTCHD3P2-201ENST00000424937 TMEM250H0YL14 139 aa15.23■□□□□ 0.03
PTCHD3P2-201ENST00000424937 P01737 135 aa15.23■□□□□ 0.03
PTCHD3P2-201ENST00000424937 RPS20P60866 119 aaKnown RBP15.23■□□□□ 0.03
PTCHD3P2-201ENST00000424937 ATP6V0E2Q8NHE4 81 aa15.23■□□□□ 0.03
PTCHD3P2-201ENST00000424937 TPPP3Q9BW30 176 aa15.23■□□□□ 0.03
PTCHD3P2-201ENST00000424937 SSBP4Q9BWG4 385 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3P2-201ENST00000424937 CEBPGP53567 150 aa15.22■□□□□ 0.03
PTCHD3P2-201ENST00000424937 SSTP61278 116 aa15.22■□□□□ 0.03
PTCHD3P2-201ENST00000424937 TNP2Q05952 138 aa15.22■□□□□ 0.03
PTCHD3P2-201ENST00000424937 EIF5A2Q9GZV4 153 aaKnown RBP15.22■□□□□ 0.03
PTCHD3P2-201ENST00000424937 LINC00694P0DN24 101 aa15.21■□□□□ 0.03
PTCHD3P2-201ENST00000424937 LINC00315P59091 139 aa15.21■□□□□ 0.03
PTCHD3P2-201ENST00000424937 FER1L6-AS1Q8NA97 138 aa15.21■□□□□ 0.03
PTCHD3P2-201ENST00000424937 Q9UF83 564 aa15.21■□□□□ 0.03
PTCHD3P2-201ENST00000424937 XKRY2A2RUG3 117 aa15.2■□□□□ 0.02
PTCHD3P2-201ENST00000424937 ZNF56Q15929 161 aa15.2■□□□□ 0.02
PTCHD3P2-201ENST00000424937 GTSF1LQ9H1H1 148 aa15.2■□□□□ 0.02
PTCHD3P2-201ENST00000424937 K7EN84 100 aa15.19■□□□□ 0.02
PTCHD3P2-201ENST00000424937 IGLC6P0CF74 106 aa15.19■□□□□ 0.02
PTCHD3P2-201ENST00000424937 DNAH10OSP0CZ25 163 aa15.19■□□□□ 0.02
PTCHD3P2-201ENST00000424937 OR10J3Q5JRS4 329 aa15.19■□□□□ 0.02
PTCHD3P2-201ENST00000424937 OCC1Q8TAD7 63 aa15.19■□□□□ 0.02
PTCHD3P2-201ENST00000424937 FAM210AQ96ND0 272 aa15.19■□□□□ 0.02
PTCHD3P2-201ENST00000424937 TRAV8-6A0A0B4J262 113 aa15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 BTF3P20290 206 aaKnown RBP15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 EVI2AP22794 236 aa15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 LELP1Q5T871 98 aa15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 NUDT10Q8NFP7 164 aa15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 NUDT11Q96G61 164 aa15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 AP1S3Q96PC3 154 aa15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 PKD1P98161 4303 aa15.18■□□□□ 0.02
PTCHD3P2-201ENST00000424937 TRAV9-2A0A087WT02 112 aa15.17■□□□□ 0.02
PTCHD3P2-201ENST00000424937 IGHV3-38A0A0C4DH36 116 aa15.17■□□□□ 0.02
PTCHD3P2-201ENST00000424937 RNASE7Q9H1E1 156 aaKnown RBP15.17■□□□□ 0.02
PTCHD3P2-201ENST00000424937 TEX261Q6UWH6 196 aa15.16■□□□□ 0.02
PTCHD3P2-201ENST00000424937 RPP21Q9H633 154 aaKnown RBP15.16■□□□□ 0.02
PTCHD3P2-201ENST00000424937 PKHD1P08F94 4074 aa15.15■□□□□ 0.02
PTCHD3P2-201ENST00000424937 RAB4BP61018 213 aa15.15■□□□□ 0.02
PTCHD3P2-201ENST00000424937 TRBV10-1A0A0K0K1A3 114 aa15.14■□□□□ 0.01
PTCHD3P2-201ENST00000424937 K7EP13 123 aa15.14■□□□□ 0.01
PTCHD3P2-201ENST00000424937 SMIM17P0DL12 118 aa15.14■□□□□ 0.01
PTCHD3P2-201ENST00000424937 CACNG7P62955 275 aa15.14■□□□□ 0.01
PTCHD3P2-201ENST00000424937 SMIM7Q9BQ49 75 aa15.14■□□□□ 0.01
PTCHD3P2-201ENST00000424937 TNFRSF18Q9Y5U5 241 aa15.14■□□□□ 0.01
PTCHD3P2-201ENST00000424937 F5H697 171 aa15.13■□□□□ 0.01
PTCHD3P2-201ENST00000424937 NDUFS6O75380 124 aaKnown RBP15.13■□□□□ 0.01
PTCHD3P2-201ENST00000424937 RPL36AP83881 106 aaKnown RBP15.13■□□□□ 0.01
PTCHD3P2-201ENST00000424937 LINC01556Q5JQF7 62 aa15.13■□□□□ 0.01
PTCHD3P2-201ENST00000424937 LYZL1Q6UWQ5 148 aa15.13■□□□□ 0.01
PTCHD3P2-201ENST00000424937 C10orf126Q8N4M7 172 aa15.13■□□□□ 0.01
PTCHD3P2-201ENST00000424937 RPL36ALQ969Q0 106 aaKnown RBP15.13■□□□□ 0.01
PTCHD3P2-201ENST00000424937 F2Z2F3 143 aa15.12■□□□□ 0.01
PTCHD3P2-201ENST00000424937 SRP19P09132 144 aaKnown RBP15.12■□□□□ 0.01
PTCHD3P2-201ENST00000424937 Q6ZRN7 208 aaPredicted RBP15.12■□□□□ 0.01
PTCHD3P2-201ENST00000424937 MSRB1Q9NZV6 116 aa15.12■□□□□ 0.01
PTCHD3P2-201ENST00000424937 KIF25-AS1Q9Y6Z4 181 aa15.12■□□□□ 0.01
PTCHD3P2-201ENST00000424937 IGHV3-30P01768 117 aa15.11■□□□□ 0.01
PTCHD3P2-201ENST00000424937 IGHV3-33P01772 117 aa15.11■□□□□ 0.01
PTCHD3P2-201ENST00000424937 IGHV3-30-3P0DP02 117 aa15.11■□□□□ 0.01
PTCHD3P2-201ENST00000424937 IGHV3-30-5P0DP03 117 aa15.11■□□□□ 0.01
PTCHD3P2-201ENST00000424937 TRBV7-3A0A075B6L6 115 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 A0A087WWC5 75 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 ZNF727A8MUV8 499 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 MGPP08493 103 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 CTRLP40313 264 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 UBE2D3P61077 147 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 UBE2D2P62837 147 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 NFE4Q86UQ8 179 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 NEXN-AS1Q8NBZ9 246 aa15.1■□□□□ 0.01
PTCHD3P2-201ENST00000424937 GATCO43716 136 aaKnown RBP15.09■□□□□ 0.01
PTCHD3P2-201ENST00000424937 OR10G8Q8NGN5 311 aa15.09■□□□□ 0.01
PTCHD3P2-201ENST00000424937 TRGC1P0CF51 173 aa15.08■□□□□ 0
PTCHD3P2-201ENST00000424937 FAM231DQ6ZW35 169 aa15.08■□□□□ 0
PTCHD3P2-201ENST00000424937 DNAH11Q96DT5 4516 aa15.08■□□□□ 0
PTCHD3P2-201ENST00000424937 NTF3P20783 257 aa15.07■□□□□ 0
PTCHD3P2-201ENST00000424937 ERVFC1-1P60608 527 aa15.07■□□□□ 0
PTCHD3P2-201ENST00000424937 LINC01551Q86U37 167 aa15.07■□□□□ 0
PTCHD3P2-201ENST00000424937 DYNC1H1Q14204 4646 aaKnown RBP15.07■□□□□ 0
PTCHD3P2-201ENST00000424937 Q8N3U1 123 aa15.06■□□□□ 0
PTCHD3P2-201ENST00000424937 WDR73Q6P4I2 378 aa15.05■□□□□ -0
PTCHD3P2-201ENST00000424937 GTSF1Q8WW33 167 aa15.05■□□□□ -0
PTCHD3P2-201ENST00000424937 DPH3P1Q9H4G8 78 aa15.05■□□□□ -0
PTCHD3P2-201ENST00000424937 A8MWL6 223 aa15.04■□□□□ -0
PTCHD3P2-201ENST00000424937 IBA57-AS1B1ANH7 110 aa15.04■□□□□ -0
PTCHD3P2-201ENST00000424937 TWIST1Q15672 202 aa15.04■□□□□ -0
PTCHD3P2-201ENST00000424937 SUMO4Q6EEV6 95 aa15.04■□□□□ -0
PTCHD3P2-201ENST00000424937 CNFNQ9BYD5 112 aa15.04■□□□□ -0
PTCHD3P2-201ENST00000424937 Q9HAA7 133 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms