RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ATP6V0E2Q8NHE4 81 aa12.04□□□□□ -0.48
SBDSP1-202ENST00000423945 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
SBDSP1-202ENST00000423945 EVI2AP22794 236 aa12.03□□□□□ -0.48
SBDSP1-202ENST00000423945 LELP1Q5T871 98 aa12.03□□□□□ -0.48
SBDSP1-202ENST00000423945 PRR27Q6MZM9 219 aa12.03□□□□□ -0.48
SBDSP1-202ENST00000423945 GTSF1LQ9H1H1 148 aa12.03□□□□□ -0.48
SBDSP1-202ENST00000423945 MSRB1Q9NZV6 116 aa12.03□□□□□ -0.48
SBDSP1-202ENST00000423945 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 RAB19A4D1S5 217 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 K7EP13 123 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 RHODO00212 210 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 SNAI2O43623 268 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 CENPWQ5EE01 88 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 LINC01556Q5JQF7 62 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 ZFP82Q8N141 532 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 SSBP4Q9BWG4 385 aaPredicted RBP12.02□□□□□ -0.49
SBDSP1-202ENST00000423945 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
SBDSP1-202ENST00000423945 TRBV20OR9-2A0A075B6H5 130 aa12□□□□□ -0.49
SBDSP1-202ENST00000423945 A0A1B0GVG6 124 aa12□□□□□ -0.49
SBDSP1-202ENST00000423945 TEX46H3BTG2 121 aa12□□□□□ -0.49
SBDSP1-202ENST00000423945 BCL2P10415 239 aa12□□□□□ -0.49
SBDSP1-202ENST00000423945 OR10J3Q5JRS4 329 aa12□□□□□ -0.49
SBDSP1-202ENST00000423945 NFE4Q86UQ8 179 aa12□□□□□ -0.49
SBDSP1-202ENST00000423945 Q8N3U1 123 aa12□□□□□ -0.49
SBDSP1-202ENST00000423945 TRAV8-6A0A0B4J262 113 aa11.99□□□□□ -0.49
SBDSP1-202ENST00000423945 MUC21A0A0G2JKD1 596 aa11.99□□□□□ -0.49
SBDSP1-202ENST00000423945 MUC21A0A140T8X8 626 aa11.99□□□□□ -0.49
SBDSP1-202ENST00000423945 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
SBDSP1-202ENST00000423945 C19orf71A6NCJ1 209 aa11.98□□□□□ -0.49
SBDSP1-202ENST00000423945 FUSP35637 526 aaKnown RBP eCLIP11.98□□□□□ -0.49
SBDSP1-202ENST00000423945 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
SBDSP1-202ENST00000423945 A0A087WTM6 91 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 IBA57-AS1B1ANH7 110 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 PDE6DO43924 150 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 IFNA1P01562 189 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 IGHV3-33P01772 117 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 GZMBP10144 247 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 ALKAL2Q6UX46 152 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 MED9Q9NWA0 146 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 ABCA13Q86UQ4 5058 aa11.97□□□□□ -0.49
SBDSP1-202ENST00000423945 ERVFC1-1P60608 527 aa11.96□□□□□ -0.49
SBDSP1-202ENST00000423945 CDK2AP2O75956 126 aa11.95□□□□□ -0.5
SBDSP1-202ENST00000423945 IGLC6P0CF74 106 aa11.95□□□□□ -0.5
SBDSP1-202ENST00000423945 GNG4P50150 75 aa11.95□□□□□ -0.5
SBDSP1-202ENST00000423945 NKX2-5P52952 324 aaPredicted RBP11.95□□□□□ -0.5
SBDSP1-202ENST00000423945 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
SBDSP1-202ENST00000423945 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
SBDSP1-202ENST00000423945 TRBV10-1A0A0K0K1A3 114 aa11.94□□□□□ -0.5
SBDSP1-202ENST00000423945 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
SBDSP1-202ENST00000423945 LYPD6BQ8NI32 183 aa11.94□□□□□ -0.5
SBDSP1-202ENST00000423945 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
SBDSP1-202ENST00000423945 RBFOX3A6NFN3 312 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 RAB4BP61018 213 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 UBE2D3P61077 147 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 SSTP61278 116 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 UBE2D2P62837 147 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 KRTAP4-5Q9BYR2 181 aa11.93□□□□□ -0.5
SBDSP1-202ENST00000423945 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
SBDSP1-202ENST00000423945 TAGLN2P37802 199 aaKnown RBP11.92□□□□□ -0.5
SBDSP1-202ENST00000423945 ZNF56Q15929 161 aa11.92□□□□□ -0.5
SBDSP1-202ENST00000423945 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
SBDSP1-202ENST00000423945 Q9HAA7 133 aa11.92□□□□□ -0.5
SBDSP1-202ENST00000423945 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 A0A087WWC5 75 aa11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 RPL36AP83881 106 aaKnown RBP11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 DAZ4Q86SG3 579 aaKnown RBP11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 FER1L6-AS1Q8NA97 138 aa11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 RPL36ALQ969Q0 106 aaKnown RBP11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 DAZAP1Q96EP5 407 aaKnown RBP11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 DAZ3Q9NR90 486 aaKnown RBP11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
SBDSP1-202ENST00000423945 K7EN84 100 aa11.9□□□□□ -0.5
SBDSP1-202ENST00000423945 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
SBDSP1-202ENST00000423945 BLOC1S1P78537 153 aa11.9□□□□□ -0.5
SBDSP1-202ENST00000423945 NIT1Q86X76 327 aa11.9□□□□□ -0.5
SBDSP1-202ENST00000423945 NUDT10Q8NFP7 164 aa11.9□□□□□ -0.5
SBDSP1-202ENST00000423945 NUDT11Q96G61 164 aa11.9□□□□□ -0.5
SBDSP1-202ENST00000423945 EREGO14944 169 aa11.89□□□□□ -0.51
SBDSP1-202ENST00000423945 P01737 135 aa11.89□□□□□ -0.51
SBDSP1-202ENST00000423945 LAGE3Q14657 143 aa11.89□□□□□ -0.51
SBDSP1-202ENST00000423945 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
SBDSP1-202ENST00000423945 TPPP3Q9BW30 176 aa11.89□□□□□ -0.51
SBDSP1-202ENST00000423945 DNAJC30Q96LL9 226 aa11.88□□□□□ -0.51
SBDSP1-202ENST00000423945 AP1S3Q96PC3 154 aa11.88□□□□□ -0.51
SBDSP1-202ENST00000423945 CDPF1Q6NVV7 123 aa11.87□□□□□ -0.51
SBDSP1-202ENST00000423945 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
SBDSP1-202ENST00000423945 RNASE7Q9H1E1 156 aaKnown RBP11.87□□□□□ -0.51
SBDSP1-202ENST00000423945 F5H697 171 aa11.86□□□□□ -0.51
SBDSP1-202ENST00000423945 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
SBDSP1-202ENST00000423945 PSCAO43653 123 aa11.86□□□□□ -0.51
SBDSP1-202ENST00000423945 WFDC2Q14508 124 aa11.86□□□□□ -0.51
SBDSP1-202ENST00000423945 BIN3Q9NQY0 253 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms