RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SLC51BQ86UW2 128 aa10.56□□□□□ -0.72
ITGB1-204ENST00000417122 ZFP82Q8N141 532 aa10.56□□□□□ -0.72
ITGB1-204ENST00000417122 C14orf178Q8N769 122 aaPredicted RBP10.56□□□□□ -0.72
ITGB1-204ENST00000417122 RYR1P21817 5038 aa10.56□□□□□ -0.72
ITGB1-204ENST00000417122 A0A087WWL8 130 aa10.55□□□□□ -0.72
ITGB1-204ENST00000417122 EREGO14944 169 aa10.55□□□□□ -0.72
ITGB1-204ENST00000417122 LINC00694P0DN24 101 aa10.55□□□□□ -0.72
ITGB1-204ENST00000417122 ERVFC1-1P60608 527 aa10.55□□□□□ -0.72
ITGB1-204ENST00000417122 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
ITGB1-204ENST00000417122 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
ITGB1-204ENST00000417122 Q9UF83 564 aa10.55□□□□□ -0.72
ITGB1-204ENST00000417122 CXCL1P09341 107 aa10.54□□□□□ -0.72
ITGB1-204ENST00000417122 IBA57-AS1B1ANH7 110 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 CDK2AP2O75956 126 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 LRP1BQ9NZR2 4599 aa10.53□□□□□ -0.72
ITGB1-204ENST00000417122 hCG_2014768A0A024R1R8 64 aa10.52□□□□□ -0.73
ITGB1-204ENST00000417122 SNAI2O43623 268 aa10.52□□□□□ -0.73
ITGB1-204ENST00000417122 IFNA1P01562 189 aa10.52□□□□□ -0.73
ITGB1-204ENST00000417122 MEF2BQ02080 365 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-204ENST00000417122 A0A087WTM6 91 aa10.51□□□□□ -0.73
ITGB1-204ENST00000417122 PDE6DO43924 150 aa10.51□□□□□ -0.73
ITGB1-204ENST00000417122 CENPWQ5EE01 88 aa10.51□□□□□ -0.73
ITGB1-204ENST00000417122 OR10AG1Q8NH19 301 aa10.51□□□□□ -0.73
ITGB1-204ENST00000417122 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
ITGB1-204ENST00000417122 KRTAP17-1Q9BYP8 105 aa10.51□□□□□ -0.73
ITGB1-204ENST00000417122 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
ITGB1-204ENST00000417122 DNAH5Q8TE73 4624 aa10.5□□□□□ -0.73
ITGB1-204ENST00000417122 A0A087WWC5 75 aa10.5□□□□□ -0.73
ITGB1-204ENST00000417122 IGLV2-8P01709 118 aa10.5□□□□□ -0.73
ITGB1-204ENST00000417122 OR5AL1P0C617 328 aa10.5□□□□□ -0.73
ITGB1-204ENST00000417122 BCL2P10415 239 aa10.5□□□□□ -0.73
ITGB1-204ENST00000417122 C9orf62Q8N4C0 152 aa10.5□□□□□ -0.73
ITGB1-204ENST00000417122 MUC21A0A0G2JKD1 596 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 TRBV10-1A0A0K0K1A3 114 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 MUC21A0A140T8X8 626 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 RAB19A4D1S5 217 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 PSCAO43653 123 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 FUSP35637 526 aaKnown RBP eCLIP10.49□□□□□ -0.73
ITGB1-204ENST00000417122 GNG4P50150 75 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 SPANXN1Q5VSR9 72 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 DAZAP1Q96EP5 407 aaKnown RBP10.49□□□□□ -0.73
ITGB1-204ENST00000417122 SMIM12Q96EX1 92 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 Q9HAA7 133 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 MED9Q9NWA0 146 aa10.49□□□□□ -0.73
ITGB1-204ENST00000417122 RAB4BP61018 213 aa10.48□□□□□ -0.73
ITGB1-204ENST00000417122 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
ITGB1-204ENST00000417122 ZNF56Q15929 161 aa10.48□□□□□ -0.73
ITGB1-204ENST00000417122 CDPF1Q6NVV7 123 aa10.48□□□□□ -0.73
ITGB1-204ENST00000417122 Q8N3U1 123 aa10.48□□□□□ -0.73
ITGB1-204ENST00000417122 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
ITGB1-204ENST00000417122 VAX2Q9UIW0 290 aa10.48□□□□□ -0.73
ITGB1-204ENST00000417122 TRBV7-3A0A075B6L6 115 aa10.47□□□□□ -0.73
ITGB1-204ENST00000417122 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
ITGB1-204ENST00000417122 TAGLN2P37802 199 aaKnown RBP10.47□□□□□ -0.73
ITGB1-204ENST00000417122 SSTP61278 116 aa10.47□□□□□ -0.73
ITGB1-204ENST00000417122 LAGE3Q14657 143 aa10.47□□□□□ -0.73
ITGB1-204ENST00000417122 PCLOQ9Y6V0 5065 aa10.47□□□□□ -0.73
ITGB1-204ENST00000417122 RPS20P60866 119 aaKnown RBP10.46□□□□□ -0.73
ITGB1-204ENST00000417122 UBE2D3P61077 147 aa10.46□□□□□ -0.73
ITGB1-204ENST00000417122 UBE2D2P62837 147 aa10.46□□□□□ -0.73
ITGB1-204ENST00000417122 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.73
ITGB1-204ENST00000417122 HSPG2P98160 4391 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 TRBV20OR9-2A0A075B6H5 130 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 IGLC6P0CF74 106 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 GZMBP10144 247 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 ALKAL2Q6UX46 152 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 DAZ4Q86SG3 579 aaKnown RBP10.45□□□□□ -0.74
ITGB1-204ENST00000417122 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 FER1L6-AS1Q8NA97 138 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 OR10G8Q8NGN5 311 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 TPPP3Q9BW30 176 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 BIN3Q9NQY0 253 aa10.45□□□□□ -0.74
ITGB1-204ENST00000417122 DAZ3Q9NR90 486 aaKnown RBP10.45□□□□□ -0.74
ITGB1-204ENST00000417122 LRCOL1A6NCL2 159 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 RBFOX3A6NFN3 312 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 F5H697 171 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 P01737 135 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 SMIM17P0DL12 118 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 NIT1Q86X76 327 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 URGCP-MRPS24S4R325 110 aa10.44□□□□□ -0.74
ITGB1-204ENST00000417122 APOBP04114 4563 aaKnown RBP10.43□□□□□ -0.74
ITGB1-204ENST00000417122 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
ITGB1-204ENST00000417122 XKRY2A2RUG3 117 aa10.43□□□□□ -0.74
ITGB1-204ENST00000417122 BLOC1S1P78537 153 aa10.43□□□□□ -0.74
ITGB1-204ENST00000417122 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
ITGB1-204ENST00000417122 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
ITGB1-204ENST00000417122 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
ITGB1-204ENST00000417122 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
ITGB1-204ENST00000417122 CACNG7P62955 275 aa10.41□□□□□ -0.74
ITGB1-204ENST00000417122 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.41□□□□□ -0.74
ITGB1-204ENST00000417122 NUDT10Q8NFP7 164 aa10.41□□□□□ -0.74
ITGB1-204ENST00000417122 NUDT11Q96G61 164 aa10.41□□□□□ -0.74
ITGB1-204ENST00000417122 A0A087WX48 190 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms