RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 FAM78BQ5VT40 261 aa1.65□□□□□ -2.14
MCF2-204ENST00000414978 EIF5AL1Q6IS14 154 aaKnown RBP1.65□□□□□ -2.14
MCF2-204ENST00000414978 SMIM15Q7Z3B0 74 aa1.65□□□□□ -2.14
MCF2-204ENST00000414978 PDZD9Q8IXQ8 264 aa1.65□□□□□ -2.14
MCF2-204ENST00000414978 LSM10Q969L4 123 aaKnown RBP1.65□□□□□ -2.14
MCF2-204ENST00000414978 ZNF714Q96N38 554 aa1.65□□□□□ -2.14
MCF2-204ENST00000414978 SMIM3Q9BZL3 60 aa1.65□□□□□ -2.14
MCF2-204ENST00000414978 ICOSQ9Y6W8 199 aa1.65□□□□□ -2.14
MCF2-204ENST00000414978 LINC00869P0C866 280 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 FABP9Q0Z7S8 132 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 C2orf83Q53S99 150 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 AMN1Q8IY45 258 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 LYG1Q8N1E2 194 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.65□□□□□ -2.15
MCF2-204ENST00000414978 LEAP2Q969E1 77 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 GPR146Q96CH1 333 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 SFRP2Q96HF1 295 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 DNAJC30Q96LL9 226 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 C11orf68Q9H3H3 251 aaKnown RBP1.65□□□□□ -2.15
MCF2-204ENST00000414978 DOCK11Q5JSL3 2073 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 VPS13DQ5THJ4 4388 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 TRAV8-1A0A0A6YYK1 113 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 IGHV7-4-1A0A0J9YVY3 117 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 A0A1B0GVY2 172 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 LINC00862A6NCI5 91 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 IZUMO1RA6ND01 250 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 C17orf98A8MV24 154 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 LYNX1G3V0Z9 82 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 IGKV1-5P01602 117 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 LYNX1P0DP58 116 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 COL8A2P25067 703 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 RPL30P62888 115 aaKnown RBP1.65□□□□□ -2.15
MCF2-204ENST00000414978 RPL39P5Q59GN2 51 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 FAM74A1Q5RGS3 127 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 LCE1DQ5T752 114 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 MIR7-3HGQ8N6C7 128 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 OR8B3Q8NGG8 313 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 OR5C1Q8NGR4 320 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 OR8B2Q96RD0 313 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 KAAG1Q9UBP8 84 aa1.65□□□□□ -2.15
MCF2-204ENST00000414978 FAM24AA6NFZ4 105 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 SYNGR2O43760 224 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 PITX3O75364 302 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 IL4P05112 153 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 ROS1P08922 2347 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 NMBP08949 121 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 SAA2P0DJI9 122 aaPredicted RBP1.64□□□□□ -2.15
MCF2-204ENST00000414978 IAPPP10997 89 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 CCL3L1P16619 93 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 EIF4EBP1Q13541 118 aaPredicted RBP1.64□□□□□ -2.15
MCF2-204ENST00000414978 RTL8BQ17RB0 113 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 RPL7L1Q6DKI1 246 aaKnown RBP1.64□□□□□ -2.15
MCF2-204ENST00000414978 HEPN1Q6WQI6 88 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 HIST1H2BAQ96A08 127 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 C14orf144Q96I85 54 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 CYTL1Q9NRR1 136 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 LYRM2Q9NU23 88 aaPredicted RBP1.64□□□□□ -2.15
MCF2-204ENST00000414978 PSENENQ9NZ42 101 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 CACFD1Q9UGQ2 172 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 CYSLTR1Q9Y271 337 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 SVEP1Q4LDE5 3571 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 KNCNA6PVL3 124 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 CEBPZOSA8MTT3 80 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 A8MWL6 223 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 A8MWP4 228 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 LEUTXA8MZ59 168 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 I3L521 148 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 CST7O76096 145 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 LY6HO94772 140 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 IFNA17P01571 189 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 APOA2P02652 100 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 TAS2R30P59541 319 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 SPANXN5Q5MJ07 72 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 FER1L6-AS1Q8NA97 138 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 ZNF439Q8NDP4 499 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 CIB3Q96Q77 187 aaPredicted RBP1.64□□□□□ -2.15
MCF2-204ENST00000414978 KRTAP4-2Q9BYR5 136 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 EIF5A2Q9GZV4 153 aaKnown RBP1.64□□□□□ -2.15
MCF2-204ENST00000414978 STARD9Q9P2P6 4700 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 TRAV26-2A0A0B4J265 109 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 PPP5D1E7EU14 171 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 PRH1P02810 166 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 METTL15P1P0C7V9 234 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 DYNLT3P51808 116 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 KRTAP10-11P60412 298 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 ZC2HC1AQ96GY0 325 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 GGACTQ9BVM4 153 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 KRTAP4-9Q9BYQ8 210 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 C11orf1Q9H5F2 150 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 MED9Q9NWA0 146 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 ZNF492Q9P255 531 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 PKHD1L1Q86WI1 4243 aa1.64□□□□□ -2.15
MCF2-204ENST00000414978 IGLV4-69A0A075B6H9 119 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 RAB5CP51148 216 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 RAB13P51153 203 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 SPINK9Q5DT21 86 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 ZNF833PQ6ZTB9 187 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 OR10P1Q8NGE3 313 aa1.63□□□□□ -2.15
MCF2-204ENST00000414978 GNPNAT1Q96EK6 184 aaPredicted RBP1.63□□□□□ -2.15
MCF2-204ENST00000414978 NARS2Q96I59 477 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms