RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 NUDT10Q8NFP7 164 aa17.37■□□□□ 0.37
CPNE1-207ENST00000414664 NUDT11Q96G61 164 aa17.37■□□□□ 0.37
CPNE1-207ENST00000414664 DNAH10Q8IVF4 4471 aa17.36■□□□□ 0.37
CPNE1-207ENST00000414664 FER1L6-AS1Q8NA97 138 aa17.36■□□□□ 0.37
CPNE1-207ENST00000414664 GZMBP10144 247 aa17.35■□□□□ 0.37
CPNE1-207ENST00000414664 TPPP3Q9BW30 176 aa17.35■□□□□ 0.37
CPNE1-207ENST00000414664 LY96Q9Y6Y9 160 aa17.35■□□□□ 0.37
CPNE1-207ENST00000414664 K7EN84 100 aa17.34■□□□□ 0.37
CPNE1-207ENST00000414664 RTL8CO15255 209 aa17.34■□□□□ 0.37
CPNE1-207ENST00000414664 IGLC6P0CF74 106 aa17.34■□□□□ 0.37
CPNE1-207ENST00000414664 ATP6V0E2Q8NHE4 81 aa17.34■□□□□ 0.37
CPNE1-207ENST00000414664 EPPK1P58107 5090 aaKnown RBP17.34■□□□□ 0.37
CPNE1-207ENST00000414664 MUC21A0A0G2JKD1 596 aa17.33■□□□□ 0.36
CPNE1-207ENST00000414664 MUC21A0A140T8X8 626 aa17.33■□□□□ 0.36
CPNE1-207ENST00000414664 F2Z2F3 143 aa17.33■□□□□ 0.36
CPNE1-207ENST00000414664 SRP19P09132 144 aaKnown RBP17.33■□□□□ 0.36
CPNE1-207ENST00000414664 CACNG7P62955 275 aa17.33■□□□□ 0.36
CPNE1-207ENST00000414664 C6orf223Q8N319 242 aa17.33■□□□□ 0.36
CPNE1-207ENST00000414664 SMIM7Q9BQ49 75 aa17.33■□□□□ 0.36
CPNE1-207ENST00000414664 SSTP61278 116 aa17.32■□□□□ 0.36
CPNE1-207ENST00000414664 C14orf178Q8N769 122 aaPredicted RBP17.32■□□□□ 0.36
CPNE1-207ENST00000414664 RNASE7Q9H1E1 156 aaKnown RBP17.32■□□□□ 0.36
CPNE1-207ENST00000414664 RPP21Q9H633 154 aaKnown RBP17.32■□□□□ 0.36
CPNE1-207ENST00000414664 GAGE12JA6NER3 117 aa17.31■□□□□ 0.36
CPNE1-207ENST00000414664 ZNF727A8MUV8 499 aa17.31■□□□□ 0.36
CPNE1-207ENST00000414664 SMIM17P0DL12 118 aa17.31■□□□□ 0.36
CPNE1-207ENST00000414664 BTF3P20290 206 aaKnown RBP17.31■□□□□ 0.36
CPNE1-207ENST00000414664 GAGE1Q13065 139 aa17.31■□□□□ 0.36
CPNE1-207ENST00000414664 GAGE4Q13068 117 aa17.31■□□□□ 0.36
CPNE1-207ENST00000414664 GAGE5Q13069 117 aa17.31■□□□□ 0.36
CPNE1-207ENST00000414664 GAGE13Q4V321 117 aa17.31■□□□□ 0.36
CPNE1-207ENST00000414664 TRAV9-2A0A087WT02 112 aa17.3■□□□□ 0.36
CPNE1-207ENST00000414664 PRSS29PA6NIE9 313 aa17.3■□□□□ 0.36
CPNE1-207ENST00000414664 RAB4BP61018 213 aa17.3■□□□□ 0.36
CPNE1-207ENST00000414664 PEA15Q15121 130 aa17.3■□□□□ 0.36
CPNE1-207ENST00000414664 AP1S3Q96PC3 154 aa17.3■□□□□ 0.36
CPNE1-207ENST00000414664 GTSF1LQ9H1H1 148 aa17.3■□□□□ 0.36
CPNE1-207ENST00000414664 TRBV10-1A0A0K0K1A3 114 aa17.29■□□□□ 0.36
CPNE1-207ENST00000414664 ZNF56Q15929 161 aa17.29■□□□□ 0.36
CPNE1-207ENST00000414664 FAM231DQ6ZW35 169 aa17.29■□□□□ 0.36
CPNE1-207ENST00000414664 TRAV8-6A0A0B4J262 113 aa17.28■□□□□ 0.36
CPNE1-207ENST00000414664 K7EP13 123 aa17.28■□□□□ 0.36
CPNE1-207ENST00000414664 GATCO43716 136 aaKnown RBP17.28■□□□□ 0.36
CPNE1-207ENST00000414664 WFDC10BQ8IUB3 73 aa17.28■□□□□ 0.36
CPNE1-207ENST00000414664 SMDT1Q9H4I9 107 aa17.28■□□□□ 0.36
CPNE1-207ENST00000414664 LINC00694P0DN24 101 aa17.27■□□□□ 0.36
CPNE1-207ENST00000414664 FAM74A3Q4VXF1 159 aa17.27■□□□□ 0.36
CPNE1-207ENST00000414664 LELP1Q5T871 98 aa17.27■□□□□ 0.36
CPNE1-207ENST00000414664 WDR73Q6P4I2 378 aa17.27■□□□□ 0.36
CPNE1-207ENST00000414664 LYZL1Q6UWQ5 148 aa17.27■□□□□ 0.36
CPNE1-207ENST00000414664 KRTAP1-5Q9BYS1 174 aa17.27■□□□□ 0.36
CPNE1-207ENST00000414664 F5H697 171 aa17.26■□□□□ 0.35
CPNE1-207ENST00000414664 EVI2AP22794 236 aa17.26■□□□□ 0.35
CPNE1-207ENST00000414664 ERVFC1-1P60608 527 aa17.26■□□□□ 0.35
CPNE1-207ENST00000414664 RPL36AP83881 106 aaKnown RBP17.26■□□□□ 0.35
CPNE1-207ENST00000414664 OR10J3Q5JRS4 329 aa17.26■□□□□ 0.35
CPNE1-207ENST00000414664 RPL36ALQ969Q0 106 aaKnown RBP17.26■□□□□ 0.35
CPNE1-207ENST00000414664 DNAH2Q9P225 4427 aa17.26■□□□□ 0.35
CPNE1-207ENST00000414664 DNAH10OSP0CZ25 163 aa17.25■□□□□ 0.35
CPNE1-207ENST00000414664 RAB14P61106 215 aa17.25■□□□□ 0.35
CPNE1-207ENST00000414664 LINC01551Q86U37 167 aa17.25■□□□□ 0.35
CPNE1-207ENST00000414664 Q9UF83 564 aa17.25■□□□□ 0.35
CPNE1-207ENST00000414664 A8MWL6 223 aa17.24■□□□□ 0.35
CPNE1-207ENST00000414664 TRGC1P0CF51 173 aa17.24■□□□□ 0.35
CPNE1-207ENST00000414664 KIF25-AS1Q9Y6Z4 181 aa17.24■□□□□ 0.35
CPNE1-207ENST00000414664 FRAS1Q86XX4 4008 aa17.24■□□□□ 0.35
CPNE1-207ENST00000414664 A0A087WWC5 75 aa17.23■□□□□ 0.35
CPNE1-207ENST00000414664 IGHV3-38A0A0C4DH36 116 aa17.23■□□□□ 0.35
CPNE1-207ENST00000414664 CTRLP40313 264 aa17.23■□□□□ 0.35
CPNE1-207ENST00000414664 TMEM241Q24JQ0 296 aa17.23■□□□□ 0.35
CPNE1-207ENST00000414664 MSRB1Q9NZV6 116 aa17.23■□□□□ 0.35
CPNE1-207ENST00000414664 TRBV7-3A0A075B6L6 115 aa17.22■□□□□ 0.35
CPNE1-207ENST00000414664 NTF3P20783 257 aa17.22■□□□□ 0.35
CPNE1-207ENST00000414664 CT83Q5H943 113 aa17.22■□□□□ 0.35
CPNE1-207ENST00000414664 C10orf126Q8N4M7 172 aa17.22■□□□□ 0.35
CPNE1-207ENST00000414664 OR10G8Q8NGN5 311 aa17.21■□□□□ 0.35
CPNE1-207ENST00000414664 CNFNQ9BYD5 112 aa17.21■□□□□ 0.35
CPNE1-207ENST00000414664 DNAH17Q9UFH2 4485 aa17.2■□□□□ 0.34
CPNE1-207ENST00000414664 SRSF3P84103 164 aaKnown RBP17.2■□□□□ 0.34
CPNE1-207ENST00000414664 OSTCQ9NRP0 149 aa17.2■□□□□ 0.34
CPNE1-207ENST00000414664 C9JQL5 133 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 MGPP08493 103 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 LINC00315P59091 139 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 UBE2D3P61077 147 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 UBE2D2P62837 147 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 TWIST1Q15672 202 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 LINC01556Q5JQF7 62 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 C15orf54Q8N8G6 183 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-207ENST00000414664 BIRC6Q9NR09 4857 aa17.19■□□□□ 0.34
CPNE1-207ENST00000414664 H7C1H1 209 aa17.18■□□□□ 0.34
CPNE1-207ENST00000414664 NEXN-AS1Q8NBZ9 246 aa17.18■□□□□ 0.34
CPNE1-207ENST00000414664 GTSF1Q8WW33 167 aa17.18■□□□□ 0.34
CPNE1-207ENST00000414664 DPH3P1Q9H4G8 78 aa17.18■□□□□ 0.34
CPNE1-207ENST00000414664 NAT8Q9UHE5 227 aa17.18■□□□□ 0.34
CPNE1-207ENST00000414664 A0A1B0GVY2 172 aa17.17■□□□□ 0.34
CPNE1-207ENST00000414664 NFE4Q86UQ8 179 aa17.17■□□□□ 0.34
CPNE1-207ENST00000414664 FOXA3P55318 350 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-207ENST00000414664 RPL23P62829 140 aaKnown RBP17.15■□□□□ 0.34
CPNE1-207ENST00000414664 TNP2Q05952 138 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms