RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GNG4P50150 75 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 CENPWQ5EE01 88 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 LELP1Q5T871 98 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 Q6ZSN1 163 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 ZNF575Q86XF7 245 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 DERL1Q9BUN8 251 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 MSRB1Q9NZV6 116 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 VAX2Q9UIW0 290 aa7.62□□□□□ -1.19
RFFL-204ENST00000414419 BLOC1S1P78537 153 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 SPANXN1Q5VSR9 72 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 UFSP1Q6NVU6 142 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 SPATA12Q7Z6I5 190 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 C14orf178Q8N769 122 aaPredicted RBP7.61□□□□□ -1.19
RFFL-204ENST00000414419 SMIM12Q96EX1 92 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 BIN3Q9NQY0 253 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 TNFRSF18Q9Y5U5 241 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 PKD1P98161 4303 aa7.61□□□□□ -1.19
RFFL-204ENST00000414419 RAB19A4D1S5 217 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 OR5AL1P0C617 328 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 ERVFC1-1P60608 527 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 SSTP61278 116 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 LINC01556Q5JQF7 62 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 ALKAL2Q6UX46 152 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 OR10AG1Q8NH19 301 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 PKHD1P08F94 4074 aa7.6□□□□□ -1.19
RFFL-204ENST00000414419 A0A087WWC5 75 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 XKRY2A2RUG3 117 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 SNAI2O43623 268 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 IGHV3-30P01768 117 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 IGHV3-33P01772 117 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 SMIM17P0DL12 118 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 IGHV3-30-3P0DP02 117 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 IGHV3-30-5P0DP03 117 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 RPS20P60866 119 aaKnown RBP7.59□□□□□ -1.19
RFFL-204ENST00000414419 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
RFFL-204ENST00000414419 ZNF56Q15929 161 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 Q6ZRN7 208 aaPredicted RBP7.59□□□□□ -1.19
RFFL-204ENST00000414419 OR2D3Q8NGH3 330 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
RFFL-204ENST00000414419 TPPP3Q9BW30 176 aa7.59□□□□□ -1.19
RFFL-204ENST00000414419 SSBP4Q9BWG4 385 aaPredicted RBP7.59□□□□□ -1.19
RFFL-204ENST00000414419 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 TRBV10-1A0A0K0K1A3 114 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 F5H697 171 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 PSCAO43653 123 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 IGLV2-8P01709 118 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 P01737 135 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 RAB4BP61018 213 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.58□□□□□ -1.2
RFFL-204ENST00000414419 URGCP-MRPS24S4R325 110 aa7.58□□□□□ -1.2
RFFL-204ENST00000414419 IBA57-AS1B1ANH7 110 aa7.57□□□□□ -1.2
RFFL-204ENST00000414419 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
RFFL-204ENST00000414419 FER1L6-AS1Q8NA97 138 aa7.57□□□□□ -1.2
RFFL-204ENST00000414419 Q9UF83 564 aa7.57□□□□□ -1.2
RFFL-204ENST00000414419 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 RBFOX3A6NFN3 312 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 GZMBP10144 247 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 NKX2-5P52952 324 aaPredicted RBP7.56□□□□□ -1.2
RFFL-204ENST00000414419 CACNG7P62955 275 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 KCNIP4Q6PIL6 250 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 AP1S3Q96PC3 154 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 Q9HAA7 133 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 PGPEP1Q9NXJ5 209 aa7.56□□□□□ -1.2
RFFL-204ENST00000414419 TRBV20OR9-2A0A075B6H5 130 aa7.55□□□□□ -1.2
RFFL-204ENST00000414419 A0A1B0GVG6 124 aa7.55□□□□□ -1.2
RFFL-204ENST00000414419 F2Z2F3 143 aa7.55□□□□□ -1.2
RFFL-204ENST00000414419 KRTAP10-2P60368 255 aa7.55□□□□□ -1.2
RFFL-204ENST00000414419 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
RFFL-204ENST00000414419 EIF5A2Q9GZV4 153 aaKnown RBP7.55□□□□□ -1.2
RFFL-204ENST00000414419 A0A087WTM6 91 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 TMEM250H0YL14 139 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 IGLC6P0CF74 106 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 CEBPGP53567 150 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 UBE2D3P61077 147 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 UBE2D2P62837 147 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 LAGE3Q14657 143 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 FAM210AQ96ND0 272 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 TM2D2Q9BX73 214 aa7.54□□□□□ -1.2
RFFL-204ENST00000414419 A0A087WX48 190 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 H7C1H1 209 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 MGPP08493 103 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 TRGC1P0CF51 173 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 LYZL1Q6UWQ5 148 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 NEXN-AS1Q8NBZ9 246 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 LYPD6BQ8NI32 183 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 DNAH11Q96DT5 4516 aa7.53□□□□□ -1.2
RFFL-204ENST00000414419 TMEM262E9PQX1 116 aa7.52□□□□□ -1.21
RFFL-204ENST00000414419 CDK2AP2O75956 126 aa7.52□□□□□ -1.21
RFFL-204ENST00000414419 NTF3P20783 257 aa7.52□□□□□ -1.21
RFFL-204ENST00000414419 ELOBQ15370 118 aa7.52□□□□□ -1.21
RFFL-204ENST00000414419 DAZ4Q86SG3 579 aaKnown RBP7.52□□□□□ -1.21
RFFL-204ENST00000414419 RNASE7Q9H1E1 156 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms