RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 E9PLD3 99 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 ADORA2A-AS1P86434 159 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 DAZAP2Q15038 168 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 PKDREJQ9NTG1 2253 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 ROS1P08922 2347 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 TMEM61Q8N0U2 210 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 ANGP03950 147 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 Q8N7P7 452 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 PIFOQ8TCI5 191 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 C16orf74Q96GX8 76 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 GPR179Q6PRD1 2367 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 KIAA1549LQ6ZVL6 1849 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 FAM240AA0A1B0GVK7 77 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 Q8N1Y9 231 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 MSRB1Q9NZV6 116 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 LINC00574Q9H8X3 128 aa10.59□□□□□ -0.71
SMARCA4-202ENST00000413806 SPTBN1Q01082 2364 aaKnown RBP10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 NCKAP5O14513 1909 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 CHKB-CPT1BH3BT56 60 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 DEFB113Q30KQ7 82 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 NDUFA11Q86Y39 141 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 NDUFC2-KCTD14E9PQ53 114 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 K7EQD1 137 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 FBXL19-AS1Q494R0 122 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 SPTBN2O15020 2390 aa10.58□□□□□ -0.72
SMARCA4-202ENST00000413806 C19orf71A6NCJ1 209 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 C2orf70A6NJV1 201 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 FRMD6-AS1P0C7T7 363 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 TOMM6Q96B49 74 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 DAZ2Q13117 558 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 C2orf16Q68DN1 1984 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 SLURP1P55000 103 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 ODF1Q14990 250 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 SND1-IT1Q9HBX3 110 aa10.57□□□□□ -0.72
SMARCA4-202ENST00000413806 TMEM131Q92545 1883 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 PRAC2D3DTV9 90 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 JMJD7-PLA2G4BH0Y9G9 81 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 FUSP35637 526 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 E7EUB6 86 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 BLCAPP62952 87 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 GPHB5Q86YW7 130 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 SIRPDQ9H106 197 aa10.56□□□□□ -0.72
SMARCA4-202ENST00000413806 TRAV23DV6A0A075B6W5 121 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 CHD3Q12873 2000 aaKnown RBP10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 DEFB136Q30KP8 78 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 VSIG2Q96IQ7 327 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 NREPQ16612 68 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 TIMM17AQ99595 171 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 USF3Q68DE3 2245 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
SMARCA4-202ENST00000413806 ZFP36P26651 326 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 DAND5Q8N907 189 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 EML6Q6ZMW3 1958 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 SPRY2O43597 315 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 NDUFA7O95182 113 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 APRG1Q8IVJ8 170 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 DOCK7Q96N67 2140 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 POLEQ07864 2286 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 XCL1P47992 114 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 CGB3P0DN86 165 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 CGB7P0DN87 165 aa10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 DIDO1Q9BTC0 2240 aaKnown RBP10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 COL4A4P53420 1690 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-202ENST00000413806 A0A096LPF7 62 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 C11orf86A6NJI1 115 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 TEX49A0A1B0GTD5 131 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 C14orf132Q9NPU4 83 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 COL6A6A6NMZ7 2263 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 LECT2O14960 151 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 CRIP3Q6Q6R5 217 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 OPRPNQ99935 248 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 CCDC179H3BU77 68 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 UPK3BQ9BT76 320 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 IGHV4OR15-8A0A075B7B6 117 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 A0A087WW49 117 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 H3BQ85 93 aa10.53□□□□□ -0.72
SMARCA4-202ENST00000413806 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.72
SMARCA4-202ENST00000413806 M0QXV9 152 aa10.52□□□□□ -0.73
SMARCA4-202ENST00000413806 CLPSL2Q6UWE3 100 aa10.52□□□□□ -0.73
SMARCA4-202ENST00000413806 FANCD2OSQ96PS1 177 aa10.52□□□□□ -0.73
SMARCA4-202ENST00000413806 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
SMARCA4-202ENST00000413806 C1orf195Q5TG92 126 aa10.52□□□□□ -0.73
SMARCA4-202ENST00000413806 Q6ZPA2 131 aa10.52□□□□□ -0.73
SMARCA4-202ENST00000413806 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms