RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 RHODO00212 210 aa13.13□□□□□ -0.31
PPM1B-207ENST00000409486 SRSF3P84103 164 aaKnown RBP13.13□□□□□ -0.31
PPM1B-207ENST00000409486 Q9UF83 564 aa13.13□□□□□ -0.31
PPM1B-207ENST00000409486 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
PPM1B-207ENST00000409486 F5H697 171 aa13.12□□□□□ -0.31
PPM1B-207ENST00000409486 SNAI2O43623 268 aa13.12□□□□□ -0.31
PPM1B-207ENST00000409486 CIDEAO60543 219 aa13.12□□□□□ -0.31
PPM1B-207ENST00000409486 CXCL1P09341 107 aa13.12□□□□□ -0.31
PPM1B-207ENST00000409486 ZFP2Q6ZN57 461 aa13.12□□□□□ -0.31
PPM1B-207ENST00000409486 Q6ZR54 194 aa13.12□□□□□ -0.31
PPM1B-207ENST00000409486 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
PPM1B-207ENST00000409486 CRYGDP07320 174 aa13.11□□□□□ -0.31
PPM1B-207ENST00000409486 MGPP08493 103 aa13.11□□□□□ -0.31
PPM1B-207ENST00000409486 OR5AL1P0C617 328 aa13.11□□□□□ -0.31
PPM1B-207ENST00000409486 PIK3CD-AS1Q5SR53 167 aa13.11□□□□□ -0.31
PPM1B-207ENST00000409486 C1orf134Q5TEV5 83 aa13.11□□□□□ -0.31
PPM1B-207ENST00000409486 UFSP1Q6NVU6 142 aa13.11□□□□□ -0.31
PPM1B-207ENST00000409486 WFDC10BQ8IUB3 73 aa13.11□□□□□ -0.31
PPM1B-207ENST00000409486 C9JQL5 133 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 SIVA1O15304 175 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
PPM1B-207ENST00000409486 SMIM17P0DL12 118 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 RAB14P61106 215 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 LYZL1Q6UWQ5 148 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 MSRB1Q9NZV6 116 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 ATP6V0E2Q8NHE4 81 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 KRTAP1-5Q9BYS1 174 aa13.1□□□□□ -0.31
PPM1B-207ENST00000409486 RTL8CO15255 209 aa13.09□□□□□ -0.31
PPM1B-207ENST00000409486 IGLC6P0CF74 106 aa13.09□□□□□ -0.31
PPM1B-207ENST00000409486 PEA15Q15121 130 aa13.09□□□□□ -0.31
PPM1B-207ENST00000409486 OR10J3Q5JRS4 329 aa13.09□□□□□ -0.31
PPM1B-207ENST00000409486 AP1S3Q96PC3 154 aa13.09□□□□□ -0.31
PPM1B-207ENST00000409486 SSBP4Q9BWG4 385 aaPredicted RBP13.09□□□□□ -0.31
PPM1B-207ENST00000409486 SOHLH1Q5JUK2 328 aa13.08□□□□□ -0.32
PPM1B-207ENST00000409486 SH2D6Q7Z4S9 175 aa13.08□□□□□ -0.32
PPM1B-207ENST00000409486 LINC00862A6NCI5 91 aa13.07□□□□□ -0.32
PPM1B-207ENST00000409486 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
PPM1B-207ENST00000409486 CACNG7P62955 275 aa13.06□□□□□ -0.32
PPM1B-207ENST00000409486 ADIRFQ15847 76 aa13.06□□□□□ -0.32
PPM1B-207ENST00000409486 TTC32Q5I0X7 151 aa13.06□□□□□ -0.32
PPM1B-207ENST00000409486 LINC01551Q86U37 167 aa13.06□□□□□ -0.32
PPM1B-207ENST00000409486 C6orf223Q8N319 242 aa13.06□□□□□ -0.32
PPM1B-207ENST00000409486 TWIST1Q15672 202 aa13.05□□□□□ -0.32
PPM1B-207ENST00000409486 PGLYRP4Q96LB8 373 aa13.05□□□□□ -0.32
PPM1B-207ENST00000409486 LY96Q9Y6Y9 160 aa13.05□□□□□ -0.32
PPM1B-207ENST00000409486 EPPK1P58107 5090 aaKnown RBP13.05□□□□□ -0.32
PPM1B-207ENST00000409486 NTF3P20783 257 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 TMEM241Q24JQ0 296 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 SLC7A5P1Q8MH63 180 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 TRAV8-6A0A0B4J262 113 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 IGHV3-38A0A0C4DH36 116 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 A0A1W2PPQ1 181 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 F2Z2F3 143 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 IGHV3-33P01772 117 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 IGHV3-30-3P0DP02 117 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 RAB4BP61018 213 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 GTSF1LQ9H1H1 148 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 TNFRSF18Q9Y5U5 241 aa13.04□□□□□ -0.32
PPM1B-207ENST00000409486 FRAS1Q86XX4 4008 aa13.03□□□□□ -0.32
PPM1B-207ENST00000409486 DNAH10Q8IVF4 4471 aa13.03□□□□□ -0.32
PPM1B-207ENST00000409486 EVI2AP22794 236 aa13.03□□□□□ -0.32
PPM1B-207ENST00000409486 RPL36AP83881 106 aaKnown RBP13.03□□□□□ -0.32
PPM1B-207ENST00000409486 GTSF1Q8WW33 167 aa13.03□□□□□ -0.32
PPM1B-207ENST00000409486 RPL36ALQ969Q0 106 aaKnown RBP13.03□□□□□ -0.32
PPM1B-207ENST00000409486 LINC00336Q6ZUF6 198 aa13.02□□□□□ -0.33
PPM1B-207ENST00000409486 A8MWL6 223 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 TRGC1P0CF51 173 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 CTRLP40313 264 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 LINC00315P59091 139 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 RPL23P62829 140 aaKnown RBP13.01□□□□□ -0.33
PPM1B-207ENST00000409486 FAM231DQ6ZW35 169 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 COMMD7Q86VX2 200 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 C15orf54Q8N8G6 183 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
PPM1B-207ENST00000409486 LINC00694P0DN24 101 aa13□□□□□ -0.33
PPM1B-207ENST00000409486 FAM74A3Q4VXF1 159 aa13□□□□□ -0.33
PPM1B-207ENST00000409486 LELP1Q5T871 98 aa13□□□□□ -0.33
PPM1B-207ENST00000409486 NEXN-AS1Q8NBZ9 246 aa13□□□□□ -0.33
PPM1B-207ENST00000409486 KIF25-AS1Q9Y6Z4 181 aa13□□□□□ -0.33
PPM1B-207ENST00000409486 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
PPM1B-207ENST00000409486 TNP2Q05952 138 aa12.99□□□□□ -0.33
PPM1B-207ENST00000409486 SUMO4Q6EEV6 95 aa12.99□□□□□ -0.33
PPM1B-207ENST00000409486 Q8N3U1 123 aa12.99□□□□□ -0.33
PPM1B-207ENST00000409486 ISOC2Q96AB3 205 aa12.99□□□□□ -0.33
PPM1B-207ENST00000409486 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
PPM1B-207ENST00000409486 TRAV9-2A0A087WT02 112 aa12.98□□□□□ -0.33
PPM1B-207ENST00000409486 FOXA3P55318 350 aaPredicted RBP12.98□□□□□ -0.33
PPM1B-207ENST00000409486 DEFB104AQ8WTQ1 72 aa12.98□□□□□ -0.33
PPM1B-207ENST00000409486 BORCS7Q96B45 105 aa12.98□□□□□ -0.33
PPM1B-207ENST00000409486 DPH3P1Q9H4G8 78 aa12.98□□□□□ -0.33
PPM1B-207ENST00000409486 DNAH2Q9P225 4427 aa12.98□□□□□ -0.33
PPM1B-207ENST00000409486 TRBV10-1A0A0K0K1A3 114 aa12.97□□□□□ -0.33
PPM1B-207ENST00000409486 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
PPM1B-207ENST00000409486 OSTCQ9NRP0 149 aa12.97□□□□□ -0.33
PPM1B-207ENST00000409486 TRAV26-2A0A0B4J265 109 aa12.97□□□□□ -0.33
PPM1B-207ENST00000409486 TIRAPP58753 221 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms