RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 ZNF580Q9UK33 172 aa13.77□□□□□ -0.21
EWSR1-207ENST00000406548 TMEM238LA0A1B0GVL6 79 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 A6NJY4 79 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 HERVK_113P61574 105 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 RPL39P62891 51 aaKnown RBP13.76□□□□□ -0.21
EWSR1-207ENST00000406548 DEFB104AQ8WTQ1 72 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 TIMM17AQ99595 171 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 SDHAF1A6NFY7 115 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 LGALS9O00182 355 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 PSMB8P28062 276 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 ODF3Q96PU9 254 aa13.76□□□□□ -0.21
EWSR1-207ENST00000406548 AVPP01185 164 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 EMP1P54849 157 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 C9orf85Q96MD7 179 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 IGHV3-16A0A0C4DH30 117 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 TRBV6-5A0A0K0K1A5 114 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 ZNF688P0C7X2 276 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 KLHL30-AS1Q8NEE0 82 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 PGPEP1Q9NXJ5 209 aa13.75□□□□□ -0.21
EWSR1-207ENST00000406548 TRBV27A0A0K0K1C4 114 aa13.74□□□□□ -0.21
EWSR1-207ENST00000406548 SRSF9Q13242 221 aaKnown RBP eCLIP13.74□□□□□ -0.21
EWSR1-207ENST00000406548 GAGE13Q4V321 117 aa13.74□□□□□ -0.21
EWSR1-207ENST00000406548 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
EWSR1-207ENST00000406548 PRO0461Q9UI25 63 aa13.74□□□□□ -0.21
EWSR1-207ENST00000406548 MRPL16Q9NX20 251 aaKnown RBP13.74□□□□□ -0.21
EWSR1-207ENST00000406548 UBE2D1P51668 147 aa13.73□□□□□ -0.21
EWSR1-207ENST00000406548 A0A0J9YX75 114 aa13.72□□□□□ -0.21
EWSR1-207ENST00000406548 B4DSR2 109 aa13.72□□□□□ -0.21
EWSR1-207ENST00000406548 SYT8Q8NBV8 401 aa13.72□□□□□ -0.21
EWSR1-207ENST00000406548 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
EWSR1-207ENST00000406548 J3QR89 54 aa13.72□□□□□ -0.21
EWSR1-207ENST00000406548 SNRPD3P62318 126 aaKnown RBP13.72□□□□□ -0.21
EWSR1-207ENST00000406548 ETDBQ3ZM63 59 aa13.72□□□□□ -0.21
EWSR1-207ENST00000406548 MDFICQ9P1T7 246 aa13.72□□□□□ -0.21
EWSR1-207ENST00000406548 A0A0J9YY99 117 aa13.71□□□□□ -0.21
EWSR1-207ENST00000406548 IGKV3-20P01619 116 aa13.71□□□□□ -0.21
EWSR1-207ENST00000406548 ZNF56Q15929 161 aa13.71□□□□□ -0.21
EWSR1-207ENST00000406548 C10orf99Q6UWK7 81 aa13.71□□□□□ -0.21
EWSR1-207ENST00000406548 SH2D6Q7Z4S9 175 aa13.71□□□□□ -0.21
EWSR1-207ENST00000406548 MTURNQ8N3F0 131 aa13.71□□□□□ -0.21
EWSR1-207ENST00000406548 ZNF876PQ49A33 203 aa13.71□□□□□ -0.22
EWSR1-207ENST00000406548 ZNF256Q9Y2P7 627 aaPredicted RBP13.71□□□□□ -0.22
EWSR1-207ENST00000406548 TMEM238C9JI98 176 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 Q8N1Y9 231 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 ZNRF2Q8NHG8 242 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 K7EQG2 157 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 M0QY20 66 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 TSPEAR-AS2P59090 65 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 TMEM170BQ5T4T1 132 aa13.7□□□□□ -0.22
EWSR1-207ENST00000406548 IGHV1OR15-1A0A075B7D0 117 aa13.69□□□□□ -0.22
EWSR1-207ENST00000406548 NSUN5P1Q3KNT7 163 aa13.69□□□□□ -0.22
EWSR1-207ENST00000406548 TMEM89A2RUT3 159 aa13.68□□□□□ -0.22
EWSR1-207ENST00000406548 TSPAN13O95857 204 aa13.68□□□□□ -0.22
EWSR1-207ENST00000406548 DEFB112Q30KQ8 113 aa13.68□□□□□ -0.22
EWSR1-207ENST00000406548 TSSC4Q9Y5U2 329 aaPredicted RBP13.68□□□□□ -0.22
EWSR1-207ENST00000406548 GATA3P23771 443 aa13.68□□□□□ -0.22
EWSR1-207ENST00000406548 RHOHQ15669 191 aa13.68□□□□□ -0.22
EWSR1-207ENST00000406548 SPINK13Q1W4C9 94 aa13.68□□□□□ -0.22
EWSR1-207ENST00000406548 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
EWSR1-207ENST00000406548 DLX4Q92988 240 aaPredicted RBP13.67□□□□□ -0.22
EWSR1-207ENST00000406548 SPAG8Q99932 426 aaPredicted RBP13.67□□□□□ -0.22
EWSR1-207ENST00000406548 APOMO95445 188 aa13.66□□□□□ -0.22
EWSR1-207ENST00000406548 ACACBO00763 2458 aa13.66□□□□□ -0.22
EWSR1-207ENST00000406548 COL12A1Q99715 3063 aa13.66□□□□□ -0.22
EWSR1-207ENST00000406548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.222e-8■■■■□ 24.7
EWSR1-207ENST00000406548 NFE4Q86UQ8 179 aa13.66□□□□□ -0.22
EWSR1-207ENST00000406548 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
EWSR1-207ENST00000406548 AMELXQ99217 191 aa13.66□□□□□ -0.22
EWSR1-207ENST00000406548 GAGE12HA6NDE8 117 aa13.65□□□□□ -0.22
EWSR1-207ENST00000406548 IGHV3-30P01768 117 aa13.65□□□□□ -0.22
EWSR1-207ENST00000406548 IGHV3-30-5P0DP03 117 aa13.65□□□□□ -0.22
EWSR1-207ENST00000406548 SYNJ2BPP57105 145 aa13.65□□□□□ -0.22
EWSR1-207ENST00000406548 SLC25A29Q8N8R3 303 aa13.65□□□□□ -0.22
EWSR1-207ENST00000406548 LOC107984156A0A0G2JMH3 177 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 J3QQQ9 107 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 UBE2D3P61077 147 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 UBE2D2P62837 147 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 CFAP126Q5VTH2 177 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 ARL17AQ8IVW1 177 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 SIGMAR1Q99720 223 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 LGALS3P17931 250 aaKnown RBP13.64□□□□□ -0.23
EWSR1-207ENST00000406548 OPRPNQ99935 248 aaPredicted RBP13.64□□□□□ -0.23
EWSR1-207ENST00000406548 SPATA25Q9BR10 227 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 GTSF1LQ9H1H1 148 aa13.64□□□□□ -0.23
EWSR1-207ENST00000406548 P0DMU3 169 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 FAM231AP0DMU4 169 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 FAM231CP0DMU5 169 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 AZU1P20160 251 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 SFTA2Q6UW10 78 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 SPG11Q96JI7 2443 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 PSMB2P49721 201 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 DSCR9P59020 149 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 LYRM7Q5U5X0 104 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 C20orf203Q8NBC4 194 aa13.63□□□□□ -0.23
EWSR1-207ENST00000406548 TRGV11A0A075B6L2 103 aa13.62□□□□□ -0.23
EWSR1-207ENST00000406548 I3L3M4 83 aa13.62□□□□□ -0.23
EWSR1-207ENST00000406548 INSL3P51460 131 aa13.62□□□□□ -0.23
EWSR1-207ENST00000406548 CSPG4Q6UVK1 2322 aa13.62□□□□□ -0.23
EWSR1-207ENST00000406548 CELSR2Q9HCU4 2923 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms