RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ELANEP08246 267 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 ZNRF2Q8NHG8 242 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 FAM110DQ8TAY7 271 aaPredicted RBP7.22□□□□□ -1.25
SMC1B-202ENST00000404354 POLQO75417 2590 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 IGHV3-73A0A0B4J1V6 119 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 UBE2D1P51668 147 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 C9orf47Q6ZRZ4 202 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 TEN1Q86WV5 123 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 C3orf56Q8N813 242 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 PPDPFLQ8WWR9 84 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 TRAV21A0A0B4J279 112 aa7.21□□□□□ -1.25
SMC1B-202ENST00000404354 RNF223E7ERA6 249 aa7.21□□□□□ -1.25
SMC1B-202ENST00000404354 Q8N6K4 173 aa7.21□□□□□ -1.25
SMC1B-202ENST00000404354 IGLV4-69A0A075B6H9 119 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 RNASE3P12724 160 aaKnown RBP7.21□□□□□ -1.26
SMC1B-202ENST00000404354 COX6B1P14854 86 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 SRSF2Q01130 221 aaKnown RBP7.21□□□□□ -1.26
SMC1B-202ENST00000404354 Q6ZSV7 163 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 WNK1Q9H4A3 2382 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 RBAKDNA6NC62 111 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 SDHAF1A6NFY7 115 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.26
SMC1B-202ENST00000404354 GPHB5Q86YW7 130 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.26
SMC1B-202ENST00000404354 MYO9AB2RTY4 2548 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 CRLF1O75462 422 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 HERVK_113P61574 105 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 TCF15Q12870 199 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 TCTEX1D4Q5JR98 221 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 NTN5Q8WTR8 489 aaPredicted RBP7.2□□□□□ -1.26
SMC1B-202ENST00000404354 PTPN13Q12923 2485 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 TLN2Q9Y4G6 2542 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 SLC25A20O43772 301 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 PF4V1P10720 104 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 ZNF56Q15929 161 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 AJUBAQ96IF1 538 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 PRO1854Q9UHT4 67 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 A8MZ25 164 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 J3QQQ9 107 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 M0R1W7 72 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 ZNF688P0C7X2 276 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 SUMO4Q6EEV6 95 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 CEMP1Q6PRD7 247 aaPredicted RBP7.2□□□□□ -1.26
SMC1B-202ENST00000404354 SPXQ9BT56 116 aa7.2□□□□□ -1.26
SMC1B-202ENST00000404354 TRAV4A0A0B4J268 109 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 TEX49A0A1B0GTD5 131 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 A0A1W2PPR1 153 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 PRM2P04554 102 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 UBE2D3P61077 147 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 UBE2D2P62837 147 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 PMVKQ15126 192 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 C10orf126Q8N4M7 172 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 TEX29Q8N6K0 151 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 KLK9Q9UKQ9 250 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 FOXC1Q12948 553 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 FAM159AQ6UWV7 190 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 MUSTN1Q8IVN3 82 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 USP9XQ93008 2570 aaPredicted RBP7.19□□□□□ -1.26
SMC1B-202ENST00000404354 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
SMC1B-202ENST00000404354 PRRC2AP48634 2157 aaKnown RBP7.19□□□□□ -1.26
SMC1B-202ENST00000404354 A0A0J9YXV3 536 aa7.18□□□□□ -1.26
SMC1B-202ENST00000404354 ZFAND6Q6FIF0 208 aa7.18□□□□□ -1.26
SMC1B-202ENST00000404354 TRAV41A0A0B4J266 112 aa7.18□□□□□ -1.26
SMC1B-202ENST00000404354 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
SMC1B-202ENST00000404354 BPESC1Q9GZL8 116 aa7.18□□□□□ -1.26
SMC1B-202ENST00000404354 MDFICQ9P1T7 246 aa7.18□□□□□ -1.26
SMC1B-202ENST00000404354 IGHV4-4A0A075B6R2 117 aa7.18□□□□□ -1.26
SMC1B-202ENST00000404354 TRAV8-3A0A0A6YYJ7 113 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 CENPVL3A0A0U1RRI6 287 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 IGIPA6NJ69 53 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 RHPN1-AS1Q9BWJ2 59 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 ERG28Q9UKR5 140 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 ZANQ9Y493 2812 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 IGF2-ASQ6U949 168 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 C9orf139Q6ZV77 190 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 DAND5Q8N907 189 aa7.17□□□□□ -1.26
SMC1B-202ENST00000404354 P0DMU3 169 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 FAM231AP0DMU4 169 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 FAM231CP0DMU5 169 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 BLCAPP62952 87 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 KNCNA6PVL3 124 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 TMEM95Q3KNT9 176 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 MINOS1Q5TGZ0 78 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 TMEM190Q8WZ59 177 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 DUX5Q96PT3 197 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 SIRPDQ9H106 197 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 TRBV7-1A0A0A6YYK4 115 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 GAGE2BQ13066 116 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 GAGE2EQ4V326 116 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 TTC32Q5I0X7 151 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 GAGE2DQ9UEU5 116 aa7.16□□□□□ -1.26
SMC1B-202ENST00000404354 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 SNCGO76070 127 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 LINC00315P59091 139 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 EBI3Q14213 229 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 ITLN2Q8WWU7 325 aaPredicted RBP7.15□□□□□ -1.26
SMC1B-202ENST00000404354 SONP18583 2426 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms