RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 LY6DQ14210 128 aa10.7□□□□□ -0.7
HMGA2-204ENST00000403681 BRD3OSQ6XYD6 125 aa10.7□□□□□ -0.7
HMGA2-204ENST00000403681 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
HMGA2-204ENST00000403681 RASL10AQ92737 203 aa10.7□□□□□ -0.7
HMGA2-204ENST00000403681 DAZ1Q9NQZ3 744 aaKnown RBP10.7□□□□□ -0.7
HMGA2-204ENST00000403681 UBE2L6O14933 153 aa10.7□□□□□ -0.7
HMGA2-204ENST00000403681 LEPROTO15243 131 aa10.7□□□□□ -0.7
HMGA2-204ENST00000403681 DEFB1P60022 68 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 NRACQ8N912 160 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 ZNF625Q96I27 306 aaPredicted RBP10.69□□□□□ -0.7
HMGA2-204ENST00000403681 USMG5Q96IX5 58 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 FRYLO94915 3013 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 SUMO4Q6EEV6 95 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 MYO18BQ8IUG5 2567 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 TRBV7-9A0A0J9YWB2 115 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 A0A0J9YXV3 536 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 TOMM7Q9P0U1 55 aa10.69□□□□□ -0.7
HMGA2-204ENST00000403681 Q8N9W7 124 aa10.68□□□□□ -0.7
HMGA2-204ENST00000403681 NDUFA4O00483 81 aa10.68□□□□□ -0.7
HMGA2-204ENST00000403681 MRPS12O15235 138 aaKnown RBP10.68□□□□□ -0.7
HMGA2-204ENST00000403681 MORN3Q6PF18 240 aaPredicted RBP10.68□□□□□ -0.7
HMGA2-204ENST00000403681 A0A0J9YY99 117 aa10.68□□□□□ -0.7
HMGA2-204ENST00000403681 CNFNQ9BYD5 112 aa10.68□□□□□ -0.7
HMGA2-204ENST00000403681 KLK9Q9UKQ9 250 aa10.68□□□□□ -0.7
HMGA2-204ENST00000403681 SONP18583 2426 aaKnown RBP10.68□□□□□ -0.7
HMGA2-204ENST00000403681 TRAV12-2A0A075B6T6 113 aa10.68□□□□□ -0.7
HMGA2-204ENST00000403681 MSRB2Q9Y3D2 182 aa10.68□□□□□ -0.7
HMGA2-204ENST00000403681 LINC01587Q99440 93 aa10.67□□□□□ -0.7
HMGA2-204ENST00000403681 C11orf21Q9P2W6 132 aa10.67□□□□□ -0.7
HMGA2-204ENST00000403681 WDFY4Q6ZS81 3184 aa10.67□□□□□ -0.7
HMGA2-204ENST00000403681 C2CD3Q4AC94 2353 aa10.67□□□□□ -0.7
HMGA2-204ENST00000403681 SPINK13Q1W4C9 94 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
HMGA2-204ENST00000403681 Q8N1Y9 231 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 KNCNA6PVL3 124 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 NDUFV3P56181 108 aaKnown RBP10.66□□□□□ -0.7
HMGA2-204ENST00000403681 CMC4P56277 68 aaPredicted RBP10.66□□□□□ -0.7
HMGA2-204ENST00000403681 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 CELSR3Q9NYQ7 3312 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 ARHGAP32A7KAX9 2087 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 H3BUX3 64 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 RHOHQ15669 191 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
HMGA2-204ENST00000403681 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
HMGA2-204ENST00000403681 LINC01619G3V211 115 aa10.65□□□□□ -0.7
HMGA2-204ENST00000403681 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
HMGA2-204ENST00000403681 PIEZO1Q92508 2521 aa10.65□□□□□ -0.7
HMGA2-204ENST00000403681 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.7
HMGA2-204ENST00000403681 GAGE2AQ6NT46 116 aa10.65□□□□□ -0.7
HMGA2-204ENST00000403681 TRBV10-2A0A0K0K1G8 114 aa10.64□□□□□ -0.71
HMGA2-204ENST00000403681 BPESC1Q9GZL8 116 aa10.64□□□□□ -0.71
HMGA2-204ENST00000403681 JPT2Q9H910 190 aa10.64□□□□□ -0.71
HMGA2-204ENST00000403681 IGHV1OR15-1A0A075B7D0 117 aa10.64□□□□□ -0.71
HMGA2-204ENST00000403681 IGF1P05019 195 aa10.64□□□□□ -0.71
HMGA2-204ENST00000403681 PRIMA1Q86XR5 153 aa10.64□□□□□ -0.71
HMGA2-204ENST00000403681 ADAMTS20P59510 1910 aa10.64□□□□□ -0.71
HMGA2-204ENST00000403681 OPRPNQ99935 248 aaPredicted RBP10.64□□□□□ -0.71
HMGA2-204ENST00000403681 LY6LH3BQJ8 138 aa10.63□□□□□ -0.71
HMGA2-204ENST00000403681 CFAP54Q96N23 3096 aa10.63□□□□□ -0.71
HMGA2-204ENST00000403681 SORL1Q92673 2214 aa10.63□□□□□ -0.71
HMGA2-204ENST00000403681 IGHG4P01861 327 aa10.63□□□□□ -0.71
HMGA2-204ENST00000403681 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
HMGA2-204ENST00000403681 IGF2RP11717 2491 aa10.63□□□□□ -0.71
HMGA2-204ENST00000403681 TLN1Q9Y490 2541 aaKnown RBP10.62□□□□□ -0.71
HMGA2-204ENST00000403681 IGHV7-4-1A0A0J9YVY3 117 aa10.62□□□□□ -0.71
HMGA2-204ENST00000403681 NACAE9PAV3 2078 aa10.62□□□□□ -0.71
HMGA2-204ENST00000403681 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
HMGA2-204ENST00000403681 GRNP28799 593 aaKnown RBP10.62□□□□□ -0.71
HMGA2-204ENST00000403681 MRGPRG-AS1Q2M3A8 158 aa10.62□□□□□ -0.71
HMGA2-204ENST00000403681 ITLN2Q8WWU7 325 aaPredicted RBP10.62□□□□□ -0.71
HMGA2-204ENST00000403681 CENPVL3A0A0U1RRI6 287 aa10.62□□□□□ -0.71
HMGA2-204ENST00000403681 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
HMGA2-204ENST00000403681 TRAV13-1A0A0B4J241 112 aa10.61□□□□□ -0.71
HMGA2-204ENST00000403681 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
HMGA2-204ENST00000403681 PEMTQ9UBM1 199 aa10.61□□□□□ -0.71
HMGA2-204ENST00000403681 CCDC168Q8NDH2 2452 aa10.61□□□□□ -0.71
HMGA2-204ENST00000403681 CSPG4Q6UVK1 2322 aa10.61□□□□□ -0.71
HMGA2-204ENST00000403681 PIP4P1Q86T03 277 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 USP34Q70CQ2 3546 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 CRPP02741 224 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 COX8CQ7Z4L0 72 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 RHODO00212 210 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 IGHV3-33P01772 117 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 HERV-K104P63124 156 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 PTPRBP23467 1997 aa10.6□□□□□ -0.71
HMGA2-204ENST00000403681 IGHV3-30P01768 117 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 IGHV3-30-5P0DP03 117 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 UBE2D1P51668 147 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 Q6ZQT7 251 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 Q6ZS46 218 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 CLEC2BQ92478 149 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 INAFM2P0DMQ5 153 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 A0A0B4J2C4 111 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 H3BT86 120 aa10.59□□□□□ -0.71
HMGA2-204ENST00000403681 IGLV2-18A0A075B6J9 118 aa10.58□□□□□ -0.72
HMGA2-204ENST00000403681 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
HMGA2-204ENST00000403681 FAM236AA0A1B0GUQ0 79 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms