RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 LINC01619G3V211 115 aa4.68□□□□□ -1.66
CLIP4-202ENST00000401605 SLC25A20O43772 301 aa4.68□□□□□ -1.66
CLIP4-202ENST00000401605 PPYP01298 95 aa4.68□□□□□ -1.66
CLIP4-202ENST00000401605 ECSCRQ19T08 205 aa4.68□□□□□ -1.66
CLIP4-202ENST00000401605 PDPNQ86YL7 162 aa4.68□□□□□ -1.66
CLIP4-202ENST00000401605 TIMM9Q9Y5J7 89 aa4.68□□□□□ -1.66
CLIP4-202ENST00000401605 MALRD1Q5VYJ5 2156 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 IGHV3OR15-7A0A075B7D8 119 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 UBE2L5PA0A1B0GUS4 154 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 C9JCJ5 164 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 MRPS12O15235 138 aaKnown RBP4.67□□□□□ -1.66
CLIP4-202ENST00000401605 MYCNOSP40205 109 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 SNRPD3P62318 126 aaKnown RBP4.67□□□□□ -1.66
CLIP4-202ENST00000401605 ERCC8Q13216 396 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 ORMDL2Q53FV1 153 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 Q6ZR03 302 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 C17orf77Q96MU5 243 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 UPK3BQ9BT76 320 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 TMSB15BA0A087X1C1 80 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 FSHBP01225 129 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 SUB1P53999 127 aaKnown RBP eCLIP4.67□□□□□ -1.66
CLIP4-202ENST00000401605 HIST1H4AP62805 103 aaKnown RBP4.67□□□□□ -1.66
CLIP4-202ENST00000401605 CEMP1Q6PRD7 247 aaPredicted RBP4.67□□□□□ -1.66
CLIP4-202ENST00000401605 C9orf139Q6ZV77 190 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 LINC00643Q86TS7 51 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 DEFB108BQ8NET1 73 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 ITLN1Q8WWA0 313 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 SLC25A2Q9BXI2 301 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 V9GYV3 84 aa4.67□□□□□ -1.66
CLIP4-202ENST00000401605 IGHV1-58A0A0C4DH39 117 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 C8orf87E5RJ46 101 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 INS-IGF2F8WCM5 200 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 H3BMM0 161 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 GNB1P62873 340 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 PAX8Q06710 450 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 LINC00596Q86U02 117 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 GVQW1Q8N7I0 195 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 UBE2WQ96B02 151 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 LHFPL6Q9Y693 200 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 IGLV1-36A0A0B4J1U3 117 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 IQCF6A8MYZ5 107 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 FSTL3O95633 263 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 PI3P19957 117 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 SCGB1D4Q6XE38 83 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
CLIP4-202ENST00000401605 WDR86Q86TI4 376 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 TM2D3Q9BRN9 247 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 OSTCQ9NRP0 149 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 DKK2Q9UBU2 259 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 NBEAL1Q6ZS30 2694 aa4.66□□□□□ -1.66
CLIP4-202ENST00000401605 NPPCP23582 126 aa4.65□□□□□ -1.66
CLIP4-202ENST00000401605 KRTAP27-1Q3LI81 207 aa4.65□□□□□ -1.66
CLIP4-202ENST00000401605 LINC00173Q6ZV60 143 aa4.65□□□□□ -1.66
CLIP4-202ENST00000401605 ATP5L2Q7Z4Y8 100 aa4.65□□□□□ -1.66
CLIP4-202ENST00000401605 TRGV9Q99603 122 aa4.65□□□□□ -1.66
CLIP4-202ENST00000401605 ESM1Q9NQ30 184 aa4.65□□□□□ -1.66
CLIP4-202ENST00000401605 TRBV25-1A0A075B6N4 114 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 SMIM27A0A1W2PRY6 76 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 MGST3O14880 152 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 LGALS3P17931 250 aaKnown RBP4.64□□□□□ -1.67
CLIP4-202ENST00000401605 CA6P23280 308 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 C5orf38Q86SI9 138 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
CLIP4-202ENST00000401605 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 PAXXQ9BUH6 204 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 ZNF747Q9BV97 191 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 C11orf68Q9H3H3 251 aaKnown RBP4.64□□□□□ -1.67
CLIP4-202ENST00000401605 C19orf71A6NCJ1 209 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 M0R135 149 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 ZNF823P16415 610 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 SYNJ2BPP57105 145 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 PVRIGQ6DKI7 326 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 SPTSSAQ969W0 71 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 RITA1Q96K30 269 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 MAP6D1Q9H9H5 199 aa4.64□□□□□ -1.67
CLIP4-202ENST00000401605 PIGBOS1A0A0B4J2F0 54 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 IGHV3-64DA0A0J9YX35 117 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 NDUFB3O43676 98 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 FRMD6-AS1P0C7T7 363 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
CLIP4-202ENST00000401605 DAD1P61803 113 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 HOXA4Q00056 320 aaPredicted RBP4.63□□□□□ -1.67
CLIP4-202ENST00000401605 CENPWQ5EE01 88 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 FAM104BQ5XKR9 115 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 SPACA5Q96QH8 159 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 HIST1H4GQ99525 98 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 TMEM243Q9BU79 118 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 DNAJC9-AS1A6NH13 148 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 UPK2O00526 184 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
CLIP4-202ENST00000401605 MOB4Q9Y3A3 225 aa4.63□□□□□ -1.67
CLIP4-202ENST00000401605 H3BP45 60 aa4.62□□□□□ -1.67
CLIP4-202ENST00000401605 J3QT63 122 aa4.62□□□□□ -1.67
CLIP4-202ENST00000401605 NDUFS5O43920 106 aa4.62□□□□□ -1.67
CLIP4-202ENST00000401605 TIMM17BO60830 172 aa4.62□□□□□ -1.67
CLIP4-202ENST00000401605 NANOS3P60323 173 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms