RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 TTC32Q5I0X7 151 aa9.83□□□□□ -0.84
COL13A1-204ENST00000398975 SOHLH1Q5JUK2 328 aa9.83□□□□□ -0.84
COL13A1-204ENST00000398975 SYT8Q8NBV8 401 aa9.83□□□□□ -0.84
COL13A1-204ENST00000398975 PRADC1Q9BSG0 188 aa9.83□□□□□ -0.84
COL13A1-204ENST00000398975 TNFRSF18Q9Y5U5 241 aa9.83□□□□□ -0.84
COL13A1-204ENST00000398975 TIRAPP58753 221 aa9.82□□□□□ -0.84
COL13A1-204ENST00000398975 LINC00315P59091 139 aa9.82□□□□□ -0.84
COL13A1-204ENST00000398975 FAM74A4Q5TZK3 123 aa9.82□□□□□ -0.84
COL13A1-204ENST00000398975 Q6ZRN7 208 aaPredicted RBP9.82□□□□□ -0.84
COL13A1-204ENST00000398975 ZFP82Q8N141 532 aa9.82□□□□□ -0.84
COL13A1-204ENST00000398975 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 RBFOX3A6NFN3 312 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 K7EN84 100 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 OR5AL1P0C617 328 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 TAGLN2P37802 199 aaKnown RBP9.81□□□□□ -0.84
COL13A1-204ENST00000398975 GAGE1Q13065 139 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 GAGE4Q13068 117 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 GAGE5Q13069 117 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
COL13A1-204ENST00000398975 RHODO00212 210 aa9.8□□□□□ -0.84
COL13A1-204ENST00000398975 IGLC6P0CF74 106 aa9.8□□□□□ -0.84
COL13A1-204ENST00000398975 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
COL13A1-204ENST00000398975 SH2D6Q7Z4S9 175 aa9.8□□□□□ -0.84
COL13A1-204ENST00000398975 OR2D3Q8NGH3 330 aa9.8□□□□□ -0.84
COL13A1-204ENST00000398975 SMIM12Q96EX1 92 aa9.8□□□□□ -0.84
COL13A1-204ENST00000398975 SSTP61278 116 aa9.79□□□□□ -0.84
COL13A1-204ENST00000398975 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
COL13A1-204ENST00000398975 OCC1Q8TAD7 63 aa9.79□□□□□ -0.84
COL13A1-204ENST00000398975 KIF25-AS1Q9Y6Z4 181 aa9.79□□□□□ -0.84
COL13A1-204ENST00000398975 KIAA1109Q2LD37 5005 aa9.79□□□□□ -0.84
COL13A1-204ENST00000398975 TOR2AQ5JU69 321 aa9.78□□□□□ -0.84
COL13A1-204ENST00000398975 Q8N3U1 123 aa9.78□□□□□ -0.84
COL13A1-204ENST00000398975 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
COL13A1-204ENST00000398975 NUDT11Q96G61 164 aa9.78□□□□□ -0.84
COL13A1-204ENST00000398975 GTSF1LQ9H1H1 148 aa9.78□□□□□ -0.84
COL13A1-204ENST00000398975 MSRB1Q9NZV6 116 aa9.78□□□□□ -0.84
COL13A1-204ENST00000398975 LY96Q9Y6Y9 160 aa9.78□□□□□ -0.84
COL13A1-204ENST00000398975 TMEM250H0YL14 139 aa9.77□□□□□ -0.85
COL13A1-204ENST00000398975 DAZAP1Q96EP5 407 aaKnown RBP9.77□□□□□ -0.85
COL13A1-204ENST00000398975 RNASE7Q9H1E1 156 aaKnown RBP9.77□□□□□ -0.85
COL13A1-204ENST00000398975 IGHV3-38A0A0C4DH36 116 aa9.76□□□□□ -0.85
COL13A1-204ENST00000398975 P01737 135 aa9.76□□□□□ -0.85
COL13A1-204ENST00000398975 BTF3P20290 206 aaKnown RBP9.76□□□□□ -0.85
COL13A1-204ENST00000398975 LELP1Q5T871 98 aa9.76□□□□□ -0.85
COL13A1-204ENST00000398975 SPANXN1Q5VSR9 72 aa9.76□□□□□ -0.85
COL13A1-204ENST00000398975 FER1L6-AS1Q8NA97 138 aa9.76□□□□□ -0.85
COL13A1-204ENST00000398975 FAM210AQ96ND0 272 aa9.76□□□□□ -0.85
COL13A1-204ENST00000398975 TPPP3Q9BW30 176 aa9.76□□□□□ -0.85
COL13A1-204ENST00000398975 RPS20P60866 119 aaKnown RBP9.75□□□□□ -0.85
COL13A1-204ENST00000398975 LINC01556Q5JQF7 62 aa9.75□□□□□ -0.85
COL13A1-204ENST00000398975 OR10J3Q5JRS4 329 aa9.75□□□□□ -0.85
COL13A1-204ENST00000398975 HERC2O95714 4834 aa9.75□□□□□ -0.85
COL13A1-204ENST00000398975 C9JQL5 133 aa9.74□□□□□ -0.85
COL13A1-204ENST00000398975 SRP19P09132 144 aaKnown RBP9.74□□□□□ -0.85
COL13A1-204ENST00000398975 EVI2AP22794 236 aa9.74□□□□□ -0.85
COL13A1-204ENST00000398975 RAB4BP61018 213 aa9.74□□□□□ -0.85
COL13A1-204ENST00000398975 UBE2D3P61077 147 aa9.74□□□□□ -0.85
COL13A1-204ENST00000398975 UBE2D2P62837 147 aa9.74□□□□□ -0.85
COL13A1-204ENST00000398975 TEX261Q6UWH6 196 aa9.74□□□□□ -0.85
COL13A1-204ENST00000398975 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
COL13A1-204ENST00000398975 TRAV8-6A0A0B4J262 113 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 CEBPGP53567 150 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 KRTAP10-2P60368 255 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 ZNF56Q15929 161 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 NEXN-AS1Q8NBZ9 246 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 OR10G8Q8NGN5 311 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 EIF5A2Q9GZV4 153 aaKnown RBP9.73□□□□□ -0.85
COL13A1-204ENST00000398975 RPP21Q9H633 154 aaKnown RBP9.73□□□□□ -0.85
COL13A1-204ENST00000398975 BIN3Q9NQY0 253 aa9.73□□□□□ -0.85
COL13A1-204ENST00000398975 TRAV9-2A0A087WT02 112 aa9.72□□□□□ -0.85
COL13A1-204ENST00000398975 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
COL13A1-204ENST00000398975 CTRLP40313 264 aa9.72□□□□□ -0.85
COL13A1-204ENST00000398975 SRSF3P84103 164 aaKnown RBP9.72□□□□□ -0.85
COL13A1-204ENST00000398975 GTSF1Q8WW33 167 aa9.72□□□□□ -0.85
COL13A1-204ENST00000398975 AP1S3Q96PC3 154 aa9.72□□□□□ -0.85
COL13A1-204ENST00000398975 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
COL13A1-204ENST00000398975 IBA57-AS1B1ANH7 110 aa9.71□□□□□ -0.86
COL13A1-204ENST00000398975 K7EP13 123 aa9.71□□□□□ -0.86
COL13A1-204ENST00000398975 NDUFS6O75380 124 aaKnown RBP9.71□□□□□ -0.86
COL13A1-204ENST00000398975 SPATA12Q7Z6I5 190 aa9.71□□□□□ -0.86
COL13A1-204ENST00000398975 SMIM7Q9BQ49 75 aa9.71□□□□□ -0.86
COL13A1-204ENST00000398975 XKRY2A2RUG3 117 aa9.7□□□□□ -0.86
COL13A1-204ENST00000398975 F2Z2F3 143 aa9.7□□□□□ -0.86
COL13A1-204ENST00000398975 F5H697 171 aa9.7□□□□□ -0.86
COL13A1-204ENST00000398975 NTF3P20783 257 aa9.7□□□□□ -0.86
COL13A1-204ENST00000398975 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL13A1-204ENST00000398975 CACNG7P62955 275 aa9.7□□□□□ -0.86
COL13A1-204ENST00000398975 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
COL13A1-204ENST00000398975 LINC01551Q86U37 167 aa9.7□□□□□ -0.86
COL13A1-204ENST00000398975 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
COL13A1-204ENST00000398975 CNFNQ9BYD5 112 aa9.7□□□□□ -0.86
COL13A1-204ENST00000398975 LRP1BQ9NZR2 4599 aa9.69□□□□□ -0.86
COL13A1-204ENST00000398975 M0QY20 66 aa9.69□□□□□ -0.86
COL13A1-204ENST00000398975 SUMO4Q6EEV6 95 aa9.69□□□□□ -0.86
COL13A1-204ENST00000398975 FAM231DQ6ZW35 169 aa9.69□□□□□ -0.86
COL13A1-204ENST00000398975 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms