RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 HHLA3Q9XRX5 114 aa13.78□□□□□ -0.2
CHRFAM7A-202ENST00000397827 SORL1Q92673 2214 aa13.78□□□□□ -0.2
CHRFAM7A-202ENST00000397827 TMEM8BA6NDV4 472 aa13.78□□□□□ -0.2
CHRFAM7A-202ENST00000397827 DSCR9P59020 149 aa13.78□□□□□ -0.2
CHRFAM7A-202ENST00000397827 SMIM20Q8N5G0 67 aa13.78□□□□□ -0.2
CHRFAM7A-202ENST00000397827 IGKV2D-26A0A0A0MRZ7 120 aa13.77□□□□□ -0.2
CHRFAM7A-202ENST00000397827 RNASE3P12724 160 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 SLC25A16P16260 332 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 DCANP1Q8TF63 244 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 RPL39LQ96EH5 51 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 TM2D2Q9BX73 214 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 CREBBPQ92793 2442 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 MUC4Q99102 2169 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 MGPP08493 103 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 FHL3Q13643 280 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 ZMAT4Q9H898 229 aa13.77□□□□□ -0.21
CHRFAM7A-202ENST00000397827 A0A096LNT2 108 aa13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 RASL10AQ92737 203 aa13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 IGKCP01834 107 aa13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 SRSF1Q07955 248 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 APRG1Q8IVJ8 170 aa13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 CEND1Q8N111 149 aa13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 SMIM2Q9BVW6 85 aa13.76□□□□□ -0.21
CHRFAM7A-202ENST00000397827 K7EMT4 169 aa13.75□□□□□ -0.21
CHRFAM7A-202ENST00000397827 C1QTNF4Q9BXJ3 329 aa13.75□□□□□ -0.21
CHRFAM7A-202ENST00000397827 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
CHRFAM7A-202ENST00000397827 HIGD1BQ9P298 99 aa13.75□□□□□ -0.21
CHRFAM7A-202ENST00000397827 GTSCR1Q86UQ5 136 aa13.75□□□□□ -0.21
CHRFAM7A-202ENST00000397827 TMEM160Q9NX00 188 aa13.75□□□□□ -0.21
CHRFAM7A-202ENST00000397827 MRPL35Q9NZE8 188 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-202ENST00000397827 AGRNO00468 2067 aa13.74□□□□□ -0.21
CHRFAM7A-202ENST00000397827 ATP5LO75964 103 aa13.74□□□□□ -0.21
CHRFAM7A-202ENST00000397827 ZNF688P0C7X2 276 aa13.74□□□□□ -0.21
CHRFAM7A-202ENST00000397827 SUMO2P61956 95 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-202ENST00000397827 NAV2Q8IVL1 2488 aa13.74□□□□□ -0.21
CHRFAM7A-202ENST00000397827 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 IGKV3-20P01619 116 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 ZC2HC1BQ5TFG8 222 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 BBC3Q96PG8 261 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 TRBV25-1A0A075B6N4 114 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 PRSS29PA6NIE9 313 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 ID1P41134 155 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 RPL32P62910 135 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
CHRFAM7A-202ENST00000397827 KLLNB2CW77 178 aa13.72□□□□□ -0.21
CHRFAM7A-202ENST00000397827 DPM2O94777 84 aa13.72□□□□□ -0.21
CHRFAM7A-202ENST00000397827 NFE4Q86UQ8 179 aa13.72□□□□□ -0.21
CHRFAM7A-202ENST00000397827 DUX5Q96PT3 197 aa13.72□□□□□ -0.21
CHRFAM7A-202ENST00000397827 TRAV12-3A0A0B4J271 114 aa13.72□□□□□ -0.21
CHRFAM7A-202ENST00000397827 PSMG4Q5JS54 123 aa13.72□□□□□ -0.21
CHRFAM7A-202ENST00000397827 JPT2Q9H910 190 aa13.71□□□□□ -0.21
CHRFAM7A-202ENST00000397827 COX6B1P14854 86 aa13.71□□□□□ -0.21
CHRFAM7A-202ENST00000397827 FAM159AQ6UWV7 190 aa13.71□□□□□ -0.21
CHRFAM7A-202ENST00000397827 ZNF580Q9UK33 172 aa13.71□□□□□ -0.21
CHRFAM7A-202ENST00000397827 SYNJ2BPP57105 145 aa13.71□□□□□ -0.22
CHRFAM7A-202ENST00000397827 DEFB104AQ8WTQ1 72 aa13.71□□□□□ -0.22
CHRFAM7A-202ENST00000397827 MED14OSP0DP75 135 aa13.7□□□□□ -0.22
CHRFAM7A-202ENST00000397827 KRTAP10-9P60411 292 aa13.7□□□□□ -0.22
CHRFAM7A-202ENST00000397827 UBR5O95071 2799 aaPredicted RBP13.7□□□□□ -0.22
CHRFAM7A-202ENST00000397827 TRAV12-2A0A075B6T6 113 aa13.7□□□□□ -0.22
CHRFAM7A-202ENST00000397827 CD7P09564 240 aa13.69□□□□□ -0.22
CHRFAM7A-202ENST00000397827 RRN3P1Q2M238 152 aa13.69□□□□□ -0.22
CHRFAM7A-202ENST00000397827 ZFAND6Q6FIF0 208 aa13.69□□□□□ -0.22
CHRFAM7A-202ENST00000397827 TLN2Q9Y4G6 2542 aa13.69□□□□□ -0.22
CHRFAM7A-202ENST00000397827 MYO9AB2RTY4 2548 aa13.69□□□□□ -0.22
CHRFAM7A-202ENST00000397827 ZNF469Q96JG9 3925 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 A0A087WX48 190 aa13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 TEX29Q8N6K0 151 aa13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 BEX4Q9NWD9 120 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 VPREB3Q9UKI3 123 aa13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 IGHV4OR15-8A0A075B7B6 117 aa13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 A0A087WW49 117 aa13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 J3QLI3 93 aa13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 SMCPP49901 116 aaPredicted RBP13.68□□□□□ -0.22
CHRFAM7A-202ENST00000397827 ORMDL2Q53FV1 153 aa13.67□□□□□ -0.22
CHRFAM7A-202ENST00000397827 SCGB3A1Q96QR1 104 aa13.67□□□□□ -0.22
CHRFAM7A-202ENST00000397827 A0A087WWL8 130 aa13.67□□□□□ -0.22
CHRFAM7A-202ENST00000397827 NHLRC4P0CG21 123 aaPredicted RBP13.67□□□□□ -0.22
CHRFAM7A-202ENST00000397827 LINC00315P59091 139 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 ATP6V0E2Q8NHE4 81 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 PTH2Q96A98 100 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 KIF25-AS1Q9Y6Z4 181 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 HOXA3O43365 443 aaPredicted RBP13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 TOMM6Q96B49 74 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 TNFRSF18Q9Y5U5 241 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 CR1P17927 2039 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 EPG5Q9HCE0 2579 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 IGHV4-31P0DP07 118 aa13.66□□□□□ -0.22
CHRFAM7A-202ENST00000397827 NXPH4O95158 308 aa13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 SNRPD3P62318 126 aaKnown RBP13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 CFAP126Q5VTH2 177 aa13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 C2orf66Q6UXQ4 117 aa13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 ZNF702PQ9H963 129 aa13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 A0A0J9YX75 114 aa13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 LGALS1P09382 135 aaKnown RBP13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 Q6YL49 198 aa13.65□□□□□ -0.22
CHRFAM7A-202ENST00000397827 TMEM89A2RUT3 159 aa13.64□□□□□ -0.23
CHRFAM7A-202ENST00000397827 K7EQG2 157 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms