RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 LYRM7Q5U5X0 104 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 SIGLEC8Q9NYZ4 499 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 TP53TG1Q9Y2A0 90 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 K7EMI3 77 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 JOSD1Q15040 202 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-204ENST00000397606 ZFAND2AQ8N6M9 145 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 MSRB1Q9NZV6 116 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 MDFICQ9P1T7 246 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 VPS13AQ96RL7 3174 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 IGHV3-38A0A0C4DH36 116 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 A0A0J9YY99 117 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 SS18Q15532 418 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 MRPL23Q16540 153 aaKnown RBP6.18□□□□□ -1.42
PTPRD-204ENST00000397606 TMEM141Q96I45 108 aa6.18□□□□□ -1.42
PTPRD-204ENST00000397606 IGKV3D-20A0A0C4DH25 116 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 ERASQ7Z444 233 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 HIST1H4GQ99525 98 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 VCANP13611 3396 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 EYSQ5T1H1 3165 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 MRPS12O15235 138 aaKnown RBP6.17□□□□□ -1.42
PTPRD-204ENST00000397606 PLNP26678 52 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 ZNF124Q15973 351 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 GDF5OSQ5U4N7 250 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 LINC00482Q8N8I6 264 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 ZNF747Q9BV97 191 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 IGHV1-24A0A0C4DH33 117 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 KIR2DL5BA0A0G2JN68 375 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 KIR2DL5BA0A0G2JPC4 375 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 KIR2DL5AQ8N109 375 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 KIR2DL5BQ8NHK3 375 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 DPH3Q96FX2 82 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 SPTBN5Q9NRC6 3674 aaKnown RBP6.17□□□□□ -1.42
PTPRD-204ENST00000397606 K7EQD1 137 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 SPATA25Q9BR10 227 aa6.17□□□□□ -1.42
PTPRD-204ENST00000397606 TRAV13-1A0A0B4J241 112 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 SUMO4Q6EEV6 95 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 ICOSQ9Y6W8 199 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 OXLD1Q5BKU9 147 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 LINC00322Q6ZN03 302 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-204ENST00000397606 TRAV9-2A0A087WT02 112 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 DEFB4AO15263 64 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 GYPEP15421 78 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 PSMB2P49721 201 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 VAMP3Q15836 100 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 SYS1-DBNDD2H3BUS1 97 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 MIFP14174 115 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 NEGR1Q7Z3B1 354 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 RAB37Q96AX2 223 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 HHLA3Q9XRX5 114 aa6.16□□□□□ -1.42
PTPRD-204ENST00000397606 CFAP54Q96N23 3096 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 A0A096LPF7 62 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 PSCAO43653 123 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 IGLV2-11P01706 119 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 DAZ2Q13117 558 aaKnown RBP6.15□□□□□ -1.42
PTPRD-204ENST00000397606 DAZ4Q86SG3 579 aaKnown RBP6.15□□□□□ -1.42
PTPRD-204ENST00000397606 KRTAP1-3Q8IUG1 177 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 DAZ3Q9NR90 486 aaKnown RBP6.15□□□□□ -1.42
PTPRD-204ENST00000397606 ODF3L2Q3SX64 289 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 DNLZQ5SXM8 178 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 ATP6V0E2Q8NHE4 81 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 IL17DQ8TAD2 202 aa6.15□□□□□ -1.42
PTPRD-204ENST00000397606 TRAV4A0A0B4J268 109 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 C3orf79P0CE67 100 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 GAGE6Q13070 117 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 KLLNB2CW77 178 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 APOMO95445 188 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 EDN2P20800 178 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 LGALS9BQ3B8N2 356 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 RASL10AQ92737 203 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 PRO0255Q9UI72 69 aa6.15□□□□□ -1.43
PTPRD-204ENST00000397606 IGLC6P0CF74 106 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 C2CD3Q4AC94 2353 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 PLEKHB2Q96CS7 222 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 TRBV10-1A0A0K0K1A3 114 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 CKS1BP61024 79 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 PMVKQ15126 192 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 LINC00518Q8N0U6 118 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 C11orf45Q8TAV5 145 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 WFDC10AQ9H1F0 79 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 TP53TG3Q9ULZ0 132 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 TRBV7-3A0A075B6L6 115 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 CCL18P55774 89 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 C14orf144Q96I85 54 aa6.14□□□□□ -1.43
PTPRD-204ENST00000397606 CRXO43186 299 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-204ENST00000397606 GATA1P15976 413 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-204ENST00000397606 CRIP1P50238 77 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 FAM222AQ5U5X8 452 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 RMI2Q96E14 147 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 RPL39LQ96EH5 51 aaKnown RBP6.13□□□□□ -1.43
PTPRD-204ENST00000397606 FLNAP21333 2647 aaKnown RBP6.13□□□□□ -1.43
PTPRD-204ENST00000397606 LINC00587B1AMM8 73 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 FAM110AQ9BQ89 295 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 KIR3DS1Q14943 382 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 Q6ZTI0 123 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 ITPR3Q14573 2671 aa6.13□□□□□ -1.43
PTPRD-204ENST00000397606 SNAI2O43623 268 aa6.12□□□□□ -1.43
PTPRD-204ENST00000397606 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
PTPRD-204ENST00000397606 COX6CP09669 75 aa6.12□□□□□ -1.43
PTPRD-204ENST00000397606 KLK5Q9Y337 293 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms