RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 HMGB3O15347 200 aaKnown RBP9.51□□□□□ -0.89
SEC13-206ENST00000397102 SIX6O95475 246 aa9.51□□□□□ -0.89
SEC13-206ENST00000397102 LINC01600Q96MT4 127 aa9.51□□□□□ -0.89
SEC13-206ENST00000397102 HSPB11Q9Y547 144 aa9.51□□□□□ -0.89
SEC13-206ENST00000397102 TRBV7-3A0A075B6L6 115 aa9.5□□□□□ -0.89
SEC13-206ENST00000397102 ARL14EPLP0DKL9 152 aa9.5□□□□□ -0.89
SEC13-206ENST00000397102 RAB2AP61019 212 aa9.5□□□□□ -0.89
SEC13-206ENST00000397102 OR11H4Q8NGC9 324 aa9.5□□□□□ -0.89
SEC13-206ENST00000397102 RNF185Q96GF1 192 aa9.5□□□□□ -0.89
SEC13-206ENST00000397102 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
SEC13-206ENST00000397102 A0A087WWL8 130 aa9.49□□□□□ -0.89
SEC13-206ENST00000397102 FABP5P3A8MUU1 101 aa9.49□□□□□ -0.89
SEC13-206ENST00000397102 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
SEC13-206ENST00000397102 DNLZQ5SXM8 178 aa9.49□□□□□ -0.89
SEC13-206ENST00000397102 CLRN3Q8NCR9 226 aa9.49□□□□□ -0.89
SEC13-206ENST00000397102 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
SEC13-206ENST00000397102 EPDR1Q9UM22 224 aa9.49□□□□□ -0.89
SEC13-206ENST00000397102 A0A087WYN8 130 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 B4DEV8 164 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 ARMS2P0C7Q2 107 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 STAG3L2P0CL84 134 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 STAG3L3P0CL85 134 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 PKIAP61925 76 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
SEC13-206ENST00000397102 CYCSP99999 105 aaKnown RBP9.48□□□□□ -0.89
SEC13-206ENST00000397102 ODF1Q14990 250 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 KRTAP26-1Q6PEX3 210 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 OR10G8Q8NGN5 311 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 SUN5Q8TC36 379 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 PRR34Q9NV39 138 aa9.48□□□□□ -0.89
SEC13-206ENST00000397102 FAM240BA0A1B0GVZ2 78 aa9.47□□□□□ -0.89
SEC13-206ENST00000397102 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
SEC13-206ENST00000397102 CDC34P49427 236 aaPredicted RBP9.47□□□□□ -0.89
SEC13-206ENST00000397102 DPH3Q96FX2 82 aa9.47□□□□□ -0.89
SEC13-206ENST00000397102 IGHV3-64A0A075B6Q5 118 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 PHOX2AO14813 284 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 PTTG1O95997 202 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 GCHFRP30047 84 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 C7orf33Q8WU49 177 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 PPP1R1CQ8WVI7 109 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 PHLDA3Q9Y5J5 127 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 ARL2-SNX15V9GYD0 113 aa9.46□□□□□ -0.9
SEC13-206ENST00000397102 A0A0J9YXV3 536 aa9.45□□□□□ -0.9
SEC13-206ENST00000397102 KRBOX1C9JBD0 128 aa9.45□□□□□ -0.9
SEC13-206ENST00000397102 CHTF8P0CG12 524 aa9.45□□□□□ -0.9
SEC13-206ENST00000397102 RPL12P30050 165 aaKnown RBP9.45□□□□□ -0.9
SEC13-206ENST00000397102 WFDC1Q9HC57 220 aa9.45□□□□□ -0.9
SEC13-206ENST00000397102 PLAC8Q9NZF1 115 aa9.45□□□□□ -0.9
SEC13-206ENST00000397102 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
SEC13-206ENST00000397102 TRAV34A0A0B4J273 112 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 hDV102S1A0JD36 115 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 GRIFINA4D1Z8 144 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 M0R381 172 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 PET100P0DJ07 73 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 TPT1P13693 172 aaKnown RBP9.44□□□□□ -0.9
SEC13-206ENST00000397102 WDR73Q6P4I2 378 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 NEXN-AS1Q8NBZ9 246 aa9.44□□□□□ -0.9
SEC13-206ENST00000397102 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.43□□□□□ -0.9
SEC13-206ENST00000397102 M0R036 132 aa9.43□□□□□ -0.9
SEC13-206ENST00000397102 MPC2O95563 127 aa9.43□□□□□ -0.9
SEC13-206ENST00000397102 ZFP82Q8N141 532 aa9.43□□□□□ -0.9
SEC13-206ENST00000397102 LINC00269Q8N2A0 174 aa9.43□□□□□ -0.9
SEC13-206ENST00000397102 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
SEC13-206ENST00000397102 RAB24Q969Q5 203 aa9.43□□□□□ -0.9
SEC13-206ENST00000397102 TMEM167BQ9NRX6 74 aa9.43□□□□□ -0.9
SEC13-206ENST00000397102 H2BFSP57053 126 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 KRTAP10-8P60410 259 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 RAB4BP61018 213 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 RBX1P62877 108 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 MZT2BQ6NZ67 158 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 Q86TA4 180 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 CCDC32Q9BV29 185 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
SEC13-206ENST00000397102 CRIP1P50238 77 aa9.41□□□□□ -0.9
SEC13-206ENST00000397102 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
SEC13-206ENST00000397102 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
SEC13-206ENST00000397102 PRR27Q6MZM9 219 aa9.41□□□□□ -0.9
SEC13-206ENST00000397102 NTM-AS1Q6ZSK4 140 aa9.41□□□□□ -0.9
SEC13-206ENST00000397102 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
SEC13-206ENST00000397102 SH2D1AO60880 128 aa9.4□□□□□ -0.9
SEC13-206ENST00000397102 CXorf1O96002 111 aa9.4□□□□□ -0.9
SEC13-206ENST00000397102 SLPIP03973 132 aa9.4□□□□□ -0.9
SEC13-206ENST00000397102 ZNF56Q15929 161 aa9.4□□□□□ -0.9
SEC13-206ENST00000397102 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 REG3AQ06141 175 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 GAGE6Q13070 117 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 REG3GQ6UW15 175 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
SEC13-206ENST00000397102 TMSB15BA0A087X1C1 80 aa9.38□□□□□ -0.91
SEC13-206ENST00000397102 TRAV8-4A0A0B4J246 113 aa9.38□□□□□ -0.91
SEC13-206ENST00000397102 PEX7O00628 323 aa9.38□□□□□ -0.91
SEC13-206ENST00000397102 P01737 135 aa9.38□□□□□ -0.91
SEC13-206ENST00000397102 GTSF1Q8WW33 167 aa9.38□□□□□ -0.91
SEC13-206ENST00000397102 TRBV25-1A0A075B6N4 114 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms