RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CKS2P33552 79 aa14.66□□□□□ -0.06
VCPKMT-202ENST00000395860 LGALS9BQ3B8N2 356 aa14.66□□□□□ -0.06
VCPKMT-202ENST00000395860 ORMDL3Q8N138 153 aa14.66□□□□□ -0.06
VCPKMT-202ENST00000395860 NDUFAF3Q9BU61 184 aa14.66□□□□□ -0.06
VCPKMT-202ENST00000395860 SAMD10Q9BYL1 202 aa14.66□□□□□ -0.06
VCPKMT-202ENST00000395860 DNAH3Q8TD57 4116 aa14.66□□□□□ -0.06
VCPKMT-202ENST00000395860 NDUFA6P56556 154 aa14.65□□□□□ -0.06
VCPKMT-202ENST00000395860 DEFB121Q5J5C9 76 aa14.65□□□□□ -0.06
VCPKMT-202ENST00000395860 OVOL2Q9BRP0 275 aa14.65□□□□□ -0.06
VCPKMT-202ENST00000395860 CRYGDP07320 174 aa14.65□□□□□ -0.06
VCPKMT-202ENST00000395860 Q6ZTI0 123 aa14.65□□□□□ -0.06
VCPKMT-202ENST00000395860 SMKR1H3BMG3 65 aa14.64□□□□□ -0.07
VCPKMT-202ENST00000395860 NCR2O95944 276 aa14.64□□□□□ -0.07
VCPKMT-202ENST00000395860 PPBPP02775 128 aa14.64□□□□□ -0.07
VCPKMT-202ENST00000395860 MIFP14174 115 aa14.64□□□□□ -0.07
VCPKMT-202ENST00000395860 TP53TG1Q9Y2A0 90 aa14.64□□□□□ -0.07
VCPKMT-202ENST00000395860 U3KQK5 164 aa14.64□□□□□ -0.07
VCPKMT-202ENST00000395860 TRAV26-2A0A0B4J265 109 aa14.63□□□□□ -0.07
VCPKMT-202ENST00000395860 F5H697 171 aa14.63□□□□□ -0.07
VCPKMT-202ENST00000395860 LINC00315P59091 139 aa14.63□□□□□ -0.07
VCPKMT-202ENST00000395860 MRAP2Q96G30 205 aa14.63□□□□□ -0.07
VCPKMT-202ENST00000395860 PRELID3AQ96N28 172 aa14.63□□□□□ -0.07
VCPKMT-202ENST00000395860 NACAE9PAV3 2078 aa14.63□□□□□ -0.07
VCPKMT-202ENST00000395860 IGHV4-28A0A0C4DH34 117 aa14.62□□□□□ -0.07
VCPKMT-202ENST00000395860 ZNF56Q15929 161 aa14.62□□□□□ -0.07
VCPKMT-202ENST00000395860 CFAP126Q5VTH2 177 aa14.62□□□□□ -0.07
VCPKMT-202ENST00000395860 RS1O15537 224 aa14.62□□□□□ -0.07
VCPKMT-202ENST00000395860 OR10J3Q5JRS4 329 aa14.62□□□□□ -0.07
VCPKMT-202ENST00000395860 POM121L12Q8N7R1 296 aa14.62□□□□□ -0.07
VCPKMT-202ENST00000395860 C18orf32Q8TCD1 76 aa14.62□□□□□ -0.07
VCPKMT-202ENST00000395860 GAGE12BA1L429 117 aa14.61□□□□□ -0.07
VCPKMT-202ENST00000395860 GAGE7O76087 117 aa14.61□□□□□ -0.07
VCPKMT-202ENST00000395860 GAGE12FP0CL80 117 aa14.61□□□□□ -0.07
VCPKMT-202ENST00000395860 GAGE12GP0CL81 117 aa14.61□□□□□ -0.07
VCPKMT-202ENST00000395860 GAGE12IP0CL82 117 aa14.61□□□□□ -0.07
VCPKMT-202ENST00000395860 Q0VG73 95 aa14.61□□□□□ -0.07
VCPKMT-202ENST00000395860 RETNQ9HD89 108 aa14.61□□□□□ -0.07
VCPKMT-202ENST00000395860 IGHV3-73A0A0B4J1V6 119 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 GAS8-AS1O95177 125 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 IQCJQ1A5X6 159 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 BAGE3Q86Y29 109 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 Q8NAQ8 132 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 OR4C5Q8NGB2 326 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 DEFB4AO15263 64 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 NPYP01303 97 aa14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 GATA1P15976 413 aaPredicted RBP14.6□□□□□ -0.07
VCPKMT-202ENST00000395860 NOTCH1P46531 2555 aa14.59□□□□□ -0.07
VCPKMT-202ENST00000395860 TRGV2A0A075B6R0 118 aa14.59□□□□□ -0.07
VCPKMT-202ENST00000395860 RHODO00212 210 aa14.59□□□□□ -0.07
VCPKMT-202ENST00000395860 SUMO4Q6EEV6 95 aa14.59□□□□□ -0.07
VCPKMT-202ENST00000395860 SBSPONQ8IVN8 264 aa14.59□□□□□ -0.07
VCPKMT-202ENST00000395860 LAMTOR2Q9Y2Q5 125 aa14.59□□□□□ -0.07
VCPKMT-202ENST00000395860 TNFRSF6BO95407 300 aa14.58□□□□□ -0.08
VCPKMT-202ENST00000395860 SNRPEP62304 92 aaKnown RBP14.58□□□□□ -0.08
VCPKMT-202ENST00000395860 UFSP1Q6NVU6 142 aa14.58□□□□□ -0.08
VCPKMT-202ENST00000395860 MGAM2Q2M2H8 2515 aa14.58□□□□□ -0.08
VCPKMT-202ENST00000395860 TRAV4A0A0B4J268 109 aa14.57□□□□□ -0.08
VCPKMT-202ENST00000395860 LYRM9A8MSI8 78 aa14.57□□□□□ -0.08
VCPKMT-202ENST00000395860 FAM222AQ5U5X8 452 aa14.57□□□□□ -0.08
VCPKMT-202ENST00000395860 ZFP2Q6ZN57 461 aa14.57□□□□□ -0.08
VCPKMT-202ENST00000395860 MRAPQ8TCY5 172 aa14.57□□□□□ -0.08
VCPKMT-202ENST00000395860 DEFB130BP0DP73 79 aa14.56□□□□□ -0.08
VCPKMT-202ENST00000395860 DEFB130AP0DP74 79 aa14.56□□□□□ -0.08
VCPKMT-202ENST00000395860 COA6Q5JTJ3 125 aaKnown RBP14.56□□□□□ -0.08
VCPKMT-202ENST00000395860 NRACQ8N912 160 aa14.56□□□□□ -0.08
VCPKMT-202ENST00000395860 ZNF479Q96JC4 524 aa14.56□□□□□ -0.08
VCPKMT-202ENST00000395860 C5orf52A6NGY3 159 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 IGHV3-53P01767 116 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 LINC00612Q8N6U2 182 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 MAP1LC3AQ9H492 121 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 NBEAL1Q6ZS30 2694 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 LOC389332A0A1B0GUA5 103 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 PPP1R17O96001 155 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 RPL39LQ96EH5 51 aaKnown RBP14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 DKK2Q9UBU2 259 aa14.55□□□□□ -0.08
VCPKMT-202ENST00000395860 NBEAL2Q6ZNJ1 2754 aa14.54□□□□□ -0.08
VCPKMT-202ENST00000395860 SERF1AO75920 110 aa14.54□□□□□ -0.08
VCPKMT-202ENST00000395860 SPATA25Q9BR10 227 aa14.54□□□□□ -0.08
VCPKMT-202ENST00000395860 H7C1H1 209 aa14.53□□□□□ -0.08
VCPKMT-202ENST00000395860 M0QY20 66 aa14.53□□□□□ -0.08
VCPKMT-202ENST00000395860 PRSS3P2Q8NHM4 247 aa14.53□□□□□ -0.08
VCPKMT-202ENST00000395860 RNASEKQ6P5S7 137 aaKnown RBP14.52□□□□□ -0.08
VCPKMT-202ENST00000395860 NIT1Q86X76 327 aa14.52□□□□□ -0.08
VCPKMT-202ENST00000395860 CIDEAO60543 219 aa14.52□□□□□ -0.09
VCPKMT-202ENST00000395860 HOXA5P20719 270 aa14.52□□□□□ -0.09
VCPKMT-202ENST00000395860 Q6ZSN1 163 aa14.52□□□□□ -0.09
VCPKMT-202ENST00000395860 C18orf15Q96N68 181 aa14.52□□□□□ -0.09
VCPKMT-202ENST00000395860 TM2D3Q9BRN9 247 aa14.52□□□□□ -0.09
VCPKMT-202ENST00000395860 EDA2RQ9HAV5 297 aa14.52□□□□□ -0.09
VCPKMT-202ENST00000395860 SPART-AS1P0CW21 52 aa14.51□□□□□ -0.09
VCPKMT-202ENST00000395860 IFI27P40305 119 aaPredicted RBP14.51□□□□□ -0.09
VCPKMT-202ENST00000395860 LINC00310P59036 64 aa14.51□□□□□ -0.09
VCPKMT-202ENST00000395860 PDZD11Q5EBL8 140 aa14.51□□□□□ -0.09
VCPKMT-202ENST00000395860 CELA1Q9UNI1 258 aa14.51□□□□□ -0.09
VCPKMT-202ENST00000395860 NUPR1O60356 82 aa14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 LINC00614P0C842 121 aa14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 SUMO2P61956 95 aaKnown RBP14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 C20orf78Q9BR46 151 aa14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 DAD1P61803 113 aa14.5□□□□□ -0.09
VCPKMT-202ENST00000395860 FA2HQ7L5A8 372 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms