RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
CXCL1-201ENST00000395761 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
CXCL1-201ENST00000395761 S100A1P23297 94 aa11.53□□□□□ -0.56
CXCL1-201ENST00000395761 PIK3CD-AS1Q5SR53 167 aa11.53□□□□□ -0.56
CXCL1-201ENST00000395761 RPS10P5Q9NQ39 176 aa11.53□□□□□ -0.56
CXCL1-201ENST00000395761 TRGV4A0A0C4DH28 118 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 ATP6V1G1O75348 118 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 CTRLP40313 264 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 CRYBA4P53673 196 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 CFAP126Q5VTH2 177 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 LYZL1Q6UWQ5 148 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 CNFNQ9BYD5 112 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 HHLA3Q9XRX5 114 aa11.52□□□□□ -0.57
CXCL1-201ENST00000395761 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
CXCL1-201ENST00000395761 H3BNG1 76 aa11.51□□□□□ -0.57
CXCL1-201ENST00000395761 RS1O15537 224 aa11.51□□□□□ -0.57
CXCL1-201ENST00000395761 PAX4O43316 350 aa11.51□□□□□ -0.57
CXCL1-201ENST00000395761 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
CXCL1-201ENST00000395761 PRO0255Q9UI72 69 aa11.51□□□□□ -0.57
CXCL1-201ENST00000395761 IGHV3-73A0A0B4J1V6 119 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 NXPH4O95158 308 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 CACNG7P62955 275 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 ATRAIDQ6UW56 229 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 UBE2DNLQ8IWF7 75 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 NUP35Q8NFH5 326 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 JPT2Q9H910 190 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 KMT2AQ03164 3969 aa11.5□□□□□ -0.57
CXCL1-201ENST00000395761 A0A096LPF7 62 aa11.49□□□□□ -0.57
CXCL1-201ENST00000395761 SLAQ13239 276 aa11.49□□□□□ -0.57
CXCL1-201ENST00000395761 PGLYRP4Q96LB8 373 aa11.49□□□□□ -0.57
CXCL1-201ENST00000395761 ZFP82Q8N141 532 aa11.48□□□□□ -0.57
CXCL1-201ENST00000395761 SYT8Q8NBV8 401 aa11.48□□□□□ -0.57
CXCL1-201ENST00000395761 OR10AG1Q8NH19 301 aa11.48□□□□□ -0.57
CXCL1-201ENST00000395761 TPPP3Q9BW30 176 aa11.48□□□□□ -0.57
CXCL1-201ENST00000395761 SAMD10Q9BYL1 202 aa11.48□□□□□ -0.57
CXCL1-201ENST00000395761 TRAV9-1A0A075B6T8 112 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 MUC21A0A0G2JKD1 596 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 MUC21A0A140T8X8 626 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 M0R381 172 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 GATA1P15976 413 aaPredicted RBP11.47□□□□□ -0.57
CXCL1-201ENST00000395761 FAM3BP58499 235 aaPredicted RBP11.47□□□□□ -0.57
CXCL1-201ENST00000395761 ESRGQ1W209 222 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 NACAE9PAV3 2078 aa11.47□□□□□ -0.57
CXCL1-201ENST00000395761 A0A1B0GUT8 65 aa11.46□□□□□ -0.57
CXCL1-201ENST00000395761 A8MWV9 139 aa11.46□□□□□ -0.57
CXCL1-201ENST00000395761 NTF3P20783 257 aa11.46□□□□□ -0.57
CXCL1-201ENST00000395761 KCNIP4Q6PIL6 250 aa11.46□□□□□ -0.57
CXCL1-201ENST00000395761 Q6ZSN1 163 aa11.46□□□□□ -0.57
CXCL1-201ENST00000395761 BORCS7Q96B45 105 aa11.46□□□□□ -0.57
CXCL1-201ENST00000395761 LOC100131303A0A0U1RQF7 123 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 GYPEP15421 78 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 S100PP25815 95 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 CCL18P55774 89 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 RIGQ13278 110 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 UFSP1Q6NVU6 142 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 SLC25A29Q8N8R3 303 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 BTF3L4Q96K17 158 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 ICOSQ9Y6W8 199 aa11.45□□□□□ -0.58
CXCL1-201ENST00000395761 DNAH6Q9C0G6 4158 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 A0A1B0GW15 77 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 K7EQD1 137 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 CIDEAO60543 219 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 SSTP61278 116 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 ATP5L2Q7Z4Y8 100 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 SMCO4Q9NRQ5 59 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 MSRB1Q9NZV6 116 aa11.44□□□□□ -0.58
CXCL1-201ENST00000395761 A0A087WWL8 130 aa11.43□□□□□ -0.58
CXCL1-201ENST00000395761 CRYGDP07320 174 aa11.43□□□□□ -0.58
CXCL1-201ENST00000395761 TWIST1Q15672 202 aa11.43□□□□□ -0.58
CXCL1-201ENST00000395761 MRPL23Q16540 153 aaKnown RBP11.43□□□□□ -0.58
CXCL1-201ENST00000395761 ZFP2Q6ZN57 461 aa11.43□□□□□ -0.58
CXCL1-201ENST00000395761 IGLV2-18A0A075B6J9 118 aa11.42□□□□□ -0.58
CXCL1-201ENST00000395761 A0A1B0GXF2 115 aa11.42□□□□□ -0.58
CXCL1-201ENST00000395761 TRGC1P0CF51 173 aa11.42□□□□□ -0.58
CXCL1-201ENST00000395761 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
CXCL1-201ENST00000395761 ZNRF2Q8NHG8 242 aa11.42□□□□□ -0.58
CXCL1-201ENST00000395761 URGCP-MRPS24S4R325 110 aa11.42□□□□□ -0.58
CXCL1-201ENST00000395761 TRBV6-4A0A1B0GX49 114 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 M0R2N4 97 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 SRIP30626 198 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 ELOBQ15370 118 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 NEGR1Q7Z3B1 354 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 YPEL4Q96NS1 127 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 Q9UF83 564 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 KIF25-AS1Q9Y6Z4 181 aa11.41□□□□□ -0.58
CXCL1-201ENST00000395761 TRBV24-1A0A075B6N3 115 aa11.4□□□□□ -0.58
CXCL1-201ENST00000395761 S100A8P05109 93 aa11.4□□□□□ -0.58
CXCL1-201ENST00000395761 HBBP68871 147 aa11.4□□□□□ -0.58
CXCL1-201ENST00000395761 RHOHQ15669 191 aa11.4□□□□□ -0.58
CXCL1-201ENST00000395761 LYPD5Q6UWN5 251 aa11.4□□□□□ -0.58
CXCL1-201ENST00000395761 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
CXCL1-201ENST00000395761 GATD1Q8NB37 220 aa11.4□□□□□ -0.58
CXCL1-201ENST00000395761 AP1S3Q96PC3 154 aa11.4□□□□□ -0.58
CXCL1-201ENST00000395761 EVI2AP22794 236 aa11.39□□□□□ -0.59
CXCL1-201ENST00000395761 LINC00315P59091 139 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 843.3 ms