RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TRBV6-4A0A1B0GX49 114 aa13.74□□□□□ -0.21
SNCA-203ENST00000394986 GATCO43716 136 aaKnown RBP13.74□□□□□ -0.21
SNCA-203ENST00000394986 ERVFC1-1P60608 527 aa13.74□□□□□ -0.21
SNCA-203ENST00000394986 RHOHQ15669 191 aa13.74□□□□□ -0.21
SNCA-203ENST00000394986 LYZL1Q6UWQ5 148 aa13.74□□□□□ -0.21
SNCA-203ENST00000394986 FAM231DQ6ZW35 169 aa13.74□□□□□ -0.21
SNCA-203ENST00000394986 C14orf178Q8N769 122 aaPredicted RBP13.74□□□□□ -0.21
SNCA-203ENST00000394986 SMDT1Q9H4I9 107 aa13.74□□□□□ -0.21
SNCA-203ENST00000394986 M0R2N4 97 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 RHODO00212 210 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 TMEM241Q24JQ0 296 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 FAM74A3Q4VXF1 159 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 ZNRF2Q8NHG8 242 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 PRADC1Q9BSG0 188 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 MSRB1Q9NZV6 116 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 Q9UF83 564 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 RPL23P62829 140 aaKnown RBP13.73□□□□□ -0.21
SNCA-203ENST00000394986 NEGR1Q7Z3B1 354 aa13.73□□□□□ -0.21
SNCA-203ENST00000394986 FAM3BP58499 235 aaPredicted RBP13.72□□□□□ -0.21
SNCA-203ENST00000394986 ADIRFQ15847 76 aa13.72□□□□□ -0.21
SNCA-203ENST00000394986 GTSF1Q8WW33 167 aa13.72□□□□□ -0.21
SNCA-203ENST00000394986 NAT8Q9UHE5 227 aa13.72□□□□□ -0.21
SNCA-203ENST00000394986 MRPS16Q9Y3D3 137 aaKnown RBP13.72□□□□□ -0.21
SNCA-203ENST00000394986 A0A1W2PPQ1 181 aa13.71□□□□□ -0.22
SNCA-203ENST00000394986 CTRLP40313 264 aa13.71□□□□□ -0.22
SNCA-203ENST00000394986 SOHLH1Q5JUK2 328 aa13.71□□□□□ -0.22
SNCA-203ENST00000394986 LYPD5Q6UWN5 251 aa13.71□□□□□ -0.22
SNCA-203ENST00000394986 ISOC2Q96AB3 205 aa13.71□□□□□ -0.22
SNCA-203ENST00000394986 F2Z2F3 143 aa13.7□□□□□ -0.22
SNCA-203ENST00000394986 AP1S3Q96PC3 154 aa13.7□□□□□ -0.22
SNCA-203ENST00000394986 GAGE12JA6NER3 117 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 CACNG7P62955 275 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 GAGE1Q13065 139 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 GAGE4Q13068 117 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 GAGE5Q13069 117 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 ZNF56Q15929 161 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 GAGE13Q4V321 117 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 OSTCQ9NRP0 149 aa13.69□□□□□ -0.22
SNCA-203ENST00000394986 UPK3BQ9BT76 320 aa13.68□□□□□ -0.22
SNCA-203ENST00000394986 KIF25-AS1Q9Y6Z4 181 aa13.68□□□□□ -0.22
SNCA-203ENST00000394986 A8MWL6 223 aa13.67□□□□□ -0.22
SNCA-203ENST00000394986 NTF3P20783 257 aa13.67□□□□□ -0.22
SNCA-203ENST00000394986 CT83Q5H943 113 aa13.67□□□□□ -0.22
SNCA-203ENST00000394986 Q9H8V8 135 aa13.67□□□□□ -0.22
SNCA-203ENST00000394986 LINC00315P59091 139 aa13.66□□□□□ -0.22
SNCA-203ENST00000394986 PGLYRP4Q96LB8 373 aa13.66□□□□□ -0.22
SNCA-203ENST00000394986 V9GYV3 84 aa13.66□□□□□ -0.22
SNCA-203ENST00000394986 F5H697 171 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 MGPP08493 103 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 SMIM17P0DL12 118 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 LINC00694P0DN24 101 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 Q6ZR54 194 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 C15orf54Q8N8G6 183 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 CNFNQ9BYD5 112 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 DNAH2Q9P225 4427 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 DNAH10Q8IVF4 4471 aa13.65□□□□□ -0.22
SNCA-203ENST00000394986 NBDYA0A0U1RRE5 68 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 EVI2AP22794 236 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 RAB4BP61018 213 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 TWIST1Q15672 202 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 SH2D6Q7Z4S9 175 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 ATP6V0E2Q8NHE4 81 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 TSKUQ8WUA8 353 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 WDR73Q6P4I2 378 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 OR10G8Q8NGN5 311 aa13.64□□□□□ -0.23
SNCA-203ENST00000394986 TRGC1P0CF51 173 aa13.63□□□□□ -0.23
SNCA-203ENST00000394986 WFDC10BQ8IUB3 73 aa13.63□□□□□ -0.23
SNCA-203ENST00000394986 KRTAP1-5Q9BYS1 174 aa13.63□□□□□ -0.23
SNCA-203ENST00000394986 HIGD1CA8MV81 97 aa13.62□□□□□ -0.23
SNCA-203ENST00000394986 SIVA1O15304 175 aa13.62□□□□□ -0.23
SNCA-203ENST00000394986 FOXA3P55318 350 aaPredicted RBP13.61□□□□□ -0.23
SNCA-203ENST00000394986 NEXN-AS1Q8NBZ9 246 aa13.61□□□□□ -0.23
SNCA-203ENST00000394986 GFRA4Q9GZZ7 299 aa13.61□□□□□ -0.23
SNCA-203ENST00000394986 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
SNCA-203ENST00000394986 TIRAPP58753 221 aa13.6□□□□□ -0.23
SNCA-203ENST00000394986 SUMO4Q6EEV6 95 aa13.6□□□□□ -0.23
SNCA-203ENST00000394986 COMMD7Q86VX2 200 aa13.6□□□□□ -0.23
SNCA-203ENST00000394986 GTSF1LQ9H1H1 148 aa13.6□□□□□ -0.23
SNCA-203ENST00000394986 DPH3P1Q9H4G8 78 aa13.6□□□□□ -0.23
SNCA-203ENST00000394986 RPL36AP83881 106 aaKnown RBP13.59□□□□□ -0.23
SNCA-203ENST00000394986 RPL36ALQ969Q0 106 aaKnown RBP13.59□□□□□ -0.23
SNCA-203ENST00000394986 FAM231BA6NCW3 169 aa13.58□□□□□ -0.24
SNCA-203ENST00000394986 UBE2D3P61077 147 aa13.58□□□□□ -0.24
SNCA-203ENST00000394986 UBE2D2P62837 147 aa13.58□□□□□ -0.24
SNCA-203ENST00000394986 NUP35Q8NFH5 326 aa13.58□□□□□ -0.24
SNCA-203ENST00000394986 BORCS7Q96B45 105 aa13.58□□□□□ -0.24
SNCA-203ENST00000394986 TRBV7-3A0A075B6L6 115 aa13.57□□□□□ -0.24
SNCA-203ENST00000394986 M0QY20 66 aa13.57□□□□□ -0.24
SNCA-203ENST00000394986 ADCYAP1P18509 176 aa13.57□□□□□ -0.24
SNCA-203ENST00000394986 OR10J3Q5JRS4 329 aa13.57□□□□□ -0.24
SNCA-203ENST00000394986 UQCC3Q6UW78 93 aa13.57□□□□□ -0.24
SNCA-203ENST00000394986 IGHV3-38A0A0C4DH36 116 aa13.56□□□□□ -0.24
SNCA-203ENST00000394986 A0A1B0GUT8 65 aa13.56□□□□□ -0.24
SNCA-203ENST00000394986 RTL8CO15255 209 aa13.56□□□□□ -0.24
SNCA-203ENST00000394986 LELP1Q5T871 98 aa13.56□□□□□ -0.24
SNCA-203ENST00000394986 TRAV26-2A0A0B4J265 109 aa13.56□□□□□ -0.24
SNCA-203ENST00000394986 TTC32Q5I0X7 151 aa13.56□□□□□ -0.24
SNCA-203ENST00000394986 NAT8BQ9UHF3 227 aa13.56□□□□□ -0.24
SNCA-203ENST00000394986 TRAV8-6A0A0B4J262 113 aa13.55□□□□□ -0.24
SNCA-203ENST00000394986 SMIM27A0A1W2PRY6 76 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms