RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 MRPS16Q9Y3D3 137 aaKnown RBP3.36□□□□□ -1.87
GTDC1-205ENST00000392871 CR1P17927 2039 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 IGHV4-28A0A0C4DH34 117 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 FBLL1A6NHQ2 334 aaKnown RBP3.36□□□□□ -1.87
GTDC1-205ENST00000392871 M0R381 172 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 IGHV4-31P0DP07 118 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 FGF6P10767 208 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 SLC25A34Q6PIV7 304 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 DUX5Q96PT3 197 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 GOLT1BQ9Y3E0 138 aa3.36□□□□□ -1.87
GTDC1-205ENST00000392871 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
GTDC1-205ENST00000392871 MUC4Q99102 2169 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 HSBP1L1C9JCN9 74 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 NDUFA4O00483 81 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 TCF21O43680 179 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 NUDT3O95989 172 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 RNASE4P34096 147 aaKnown RBP3.35□□□□□ -1.87
GTDC1-205ENST00000392871 LEPP41159 167 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 RAB9AP51151 201 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 BVES-AS1Q5T3Y7 98 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 C9orf47Q6ZRZ4 202 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 C9orf139Q6ZV77 190 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 PCP2Q8IVA1 136 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 NRACQ8N912 160 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 IFI27L1Q96BM0 104 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 RHPN1-AS1Q9BWJ2 59 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 MAP1LC3AQ9H492 121 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 ITPR3Q14573 2671 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 NF1P21359 2839 aa3.35□□□□□ -1.87
GTDC1-205ENST00000392871 SPANXN1Q5VSR9 72 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 FAM159AQ6UWV7 190 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 NEGR1Q7Z3B1 354 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 OR2K2Q8NGT1 345 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 TMEM158Q8WZ71 300 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 RPL39LQ96EH5 51 aaKnown RBP3.34□□□□□ -1.87
GTDC1-205ENST00000392871 VCX2Q9H322 139 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.87
GTDC1-205ENST00000392871 NIPBLQ6KC79 2804 aaeCLIP3.34□□□□□ -1.87
GTDC1-205ENST00000392871 IGLV2-18A0A075B6J9 118 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 IGKV2D-26A0A0A0MRZ7 120 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 GAGE12JA6NER3 117 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 CCL25O15444 150 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 GNRH2O43555 120 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 IGKV3-20P01619 116 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 COX8AP10176 69 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 S100A7P31151 101 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 NMUP48645 174 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 C18orf65Q6ZTR6 163 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 OR10J6PQ8NGY7 276 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 FOXC2Q99958 501 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 NAA38Q9BRA0 125 aaKnown RBP3.34□□□□□ -1.87
GTDC1-205ENST00000392871 JPT2Q9H910 190 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 DAZ1Q9NQZ3 744 aaKnown RBP3.34□□□□□ -1.87
GTDC1-205ENST00000392871 COX11Q9Y6N1 276 aa3.34□□□□□ -1.87
GTDC1-205ENST00000392871 SETD2Q9BYW2 2564 aaPredicted RBP3.34□□□□□ -1.87
GTDC1-205ENST00000392871 OTOGQ6ZRI0 2925 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 J3QLI3 93 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 K7EP13 123 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 TAX1BP3O14907 124 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 CD5LO43866 347 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 MGPP08493 103 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 ZNF688P0C7X2 276 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 DEFB136Q30KP8 78 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 LGALS9BQ3B8N2 356 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 LGALS9CQ6DKI2 356 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 C14orf178Q8N769 122 aaPredicted RBP3.33□□□□□ -1.88
GTDC1-205ENST00000392871 FLNAP21333 2647 aaKnown RBP3.33□□□□□ -1.88
GTDC1-205ENST00000392871 FLNBO75369 2602 aaKnown RBP3.33□□□□□ -1.88
GTDC1-205ENST00000392871 TRAV12-2A0A075B6T6 113 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 K7EMI3 77 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 FSHBP01225 129 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 PSMB8P28062 276 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 GAGE1Q13065 139 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 DCANP1Q8TF63 244 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 USMG5Q96IX5 58 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 FAM19A4Q96LR4 140 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 DUX3Q96PT4 197 aa3.33□□□□□ -1.88
GTDC1-205ENST00000392871 IGHV4OR15-8A0A075B7B6 117 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 A0A087WW49 117 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 C7orf71A4D174 169 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 LINC01546A6NGU7 62 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 H3BUA1 57 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
GTDC1-205ENST00000392871 S100A4P26447 101 aaKnown RBP3.32□□□□□ -1.88
GTDC1-205ENST00000392871 FCER1GP30273 86 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 ASIPP42127 132 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 SYNJ2BPP57105 145 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 PSMG4Q5JS54 123 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 GTSCR1Q86UQ5 136 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 Q8N8P6 123 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 RASL10AQ92737 203 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 MS4A6AQ9H2W1 248 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 NXT2Q9NPJ8 142 aaKnown RBP3.32□□□□□ -1.88
GTDC1-205ENST00000392871 PEF1Q9UBV8 284 aaKnown RBP3.32□□□□□ -1.88
GTDC1-205ENST00000392871 SMPXQ9UHP9 88 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 TRAV12-3A0A0B4J271 114 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 TRAV21A0A0B4J279 112 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 OVOL1O14753 267 aa3.32□□□□□ -1.88
GTDC1-205ENST00000392871 PPBPP02775 128 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms