RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 RTL8BQ17RB0 113 aa-2.91□□□□□ -2.88
RNU6-239P-201ENST00000390990 Q5VV11 94 aa-2.91□□□□□ -2.88
RNU6-239P-201ENST00000390990 C3orf33Q6P1S2 294 aa-2.91□□□□□ -2.88
RNU6-239P-201ENST00000390990 DEFB105AQ8NG35 78 aa-2.91□□□□□ -2.88
RNU6-239P-201ENST00000390990 WFDC6Q9BQY6 131 aa-2.91□□□□□ -2.88
RNU6-239P-201ENST00000390990 RTL8AQ9BWD3 113 aa-2.91□□□□□ -2.88
RNU6-239P-201ENST00000390990 PYCARDQ9ULZ3 195 aa-2.91□□□□□ -2.88
RNU6-239P-201ENST00000390990 TRAPPC8Q9Y2L5 1435 aa-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 TMEM114B3SHH9 223 aa-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 FABP2P12104 132 aa-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 S100A3P33764 101 aa-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 MAGOHP61326 146 aaKnown RBP-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 HSPE1P61604 102 aaKnown RBP-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 NPVFQ9HCQ7 196 aa-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 ADGBQ8N7X0 1667 aa-2.92□□□□□ -2.88
RNU6-239P-201ENST00000390990 FAM135BQ49AJ0 1406 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 DNAH11Q96DT5 4516 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 CFAP126Q5VTH2 177 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 OR51A4Q8NGJ6 313 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 OTOSQ8NHW6 89 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 CARD19Q96LW7 228 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 NMNAT1Q9HAN9 279 aaPredicted RBP-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 LRTM1Q9HBL6 345 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 FAM32AQ9Y421 112 aaKnown RBP-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 PTPRMP28827 1452 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 PARP14Q460N5 1801 aa-2.93□□□□□ -2.88
RNU6-239P-201ENST00000390990 ANKRD11Q6UB99 2663 aaPredicted RBP-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 H3BQV1 296 aa-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 AIPO00170 330 aa-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 CKS2P33552 79 aa-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 EDDM3BP56851 147 aa-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 RPL19P84098 196 aaKnown RBP-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 MORN4Q8NDC4 146 aa-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 LXNQ9BS40 222 aa-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 CASKIN1Q8WXD9 1431 aa-2.94□□□□□ -2.88
RNU6-239P-201ENST00000390990 LYSTQ99698 3801 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 APOA2P02652 100 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 PTMSP20962 102 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 AKR1D1P51857 326 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 ARF6P62330 175 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 GNG5P63218 68 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 LIN52Q52LA3 116 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 NDUFA11Q86Y39 141 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 BRK1Q8WUW1 75 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 BTF3L4Q96K17 158 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 CCDC42Q96M95 316 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 NUBP2Q9Y5Y2 271 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 ZFYVE9O95405 1425 aa-2.95□□□□□ -2.88
RNU6-239P-201ENST00000390990 DOCK1Q14185 1865 aa-2.96□□□□□ -2.88
RNU6-239P-201ENST00000390990 J3KT08 172 aa-2.96□□□□□ -2.88
RNU6-239P-201ENST00000390990 SLC25A6P12236 298 aa-2.96□□□□□ -2.88
RNU6-239P-201ENST00000390990 BORCS8Q96FH0 119 aa-2.96□□□□□ -2.88
RNU6-239P-201ENST00000390990 MED11Q9P086 117 aa-2.96□□□□□ -2.88
RNU6-239P-201ENST00000390990 NDUFAF1Q9Y375 327 aa-2.96□□□□□ -2.88
RNU6-239P-201ENST00000390990 ZZEF1O43149 2961 aa-2.96□□□□□ -2.88
RNU6-239P-201ENST00000390990 GOLGA4Q13439 2230 aaKnown RBP-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 KDM5AP29375 1690 aaKnown RBP-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 XIRP1Q702N8 1843 aaKnown RBP-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 G3V2T6 193 aa-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 H7C1C5 153 aa-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 CETN3O15182 167 aa-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 LCN6P62502 163 aa-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 LAMTOR3Q9UHA4 124 aa-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 PRNDQ9UKY0 176 aa-2.97□□□□□ -2.88
RNU6-239P-201ENST00000390990 DMXL1Q9Y485 3027 aa-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 TRBV27A0A0K0K1C4 114 aa-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 MAP1LC3B2A6NCE7 125 aa-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 LSM6P62312 80 aaKnown RBP-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 SLC25A26Q70HW3 274 aa-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 NUP35Q8NFH5 326 aa-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 NKIRAS1Q9NYS0 192 aa-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.98□□□□□ -2.89
RNU6-239P-201ENST00000390990 APOBP04114 4563 aaKnown RBP-2.99□□□□□ -2.89
RNU6-239P-201ENST00000390990 ACACAQ13085 2346 aa-2.99□□□□□ -2.89
RNU6-239P-201ENST00000390990 RPS17P08708 135 aaKnown RBP-2.99□□□□□ -2.89
RNU6-239P-201ENST00000390990 TEX29Q8N6K0 151 aa-2.99□□□□□ -2.89
RNU6-239P-201ENST00000390990 KNL1Q8NG31 2342 aa-2.99□□□□□ -2.89
RNU6-239P-201ENST00000390990 CSN2P05814 226 aa-3□□□□□ -2.89
RNU6-239P-201ENST00000390990 DEFB123Q8N688 67 aa-3□□□□□ -2.89
RNU6-239P-201ENST00000390990 AGPAT4-IT1Q9H0P7 198 aa-3□□□□□ -2.89
RNU6-239P-201ENST00000390990 DNHD1Q96M86 4753 aa-3□□□□□ -2.89
RNU6-239P-201ENST00000390990 CCDC171Q6TFL3 1326 aa-3□□□□□ -2.89
RNU6-239P-201ENST00000390990 IBTKQ9P2D0 1353 aaPredicted RBP-3□□□□□ -2.89
RNU6-239P-201ENST00000390990 NUP210Q8TEM1 1887 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 TRAV12-3A0A0B4J271 114 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 SPCS2Q15005 226 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 CROCCP2Q86T23 111 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 C9orf16Q9BUW7 83 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 TAS2R8Q9NYW2 309 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 SSR3Q9UNL2 185 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 ATP6V1DQ9Y5K8 247 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 KALRNO60229 2985 aa-3.01□□□□□ -2.89
RNU6-239P-201ENST00000390990 GABARAPH6UMI1 98 aa-3.02□□□□□ -2.89
RNU6-239P-201ENST00000390990 RPP14O95059 124 aaKnown RBP-3.02□□□□□ -2.89
RNU6-239P-201ENST00000390990 SDC2P34741 201 aa-3.02□□□□□ -2.89
RNU6-239P-201ENST00000390990 BAGE3Q86Y29 109 aa-3.02□□□□□ -2.89
RNU6-239P-201ENST00000390990 ERG28Q9UKR5 140 aa-3.02□□□□□ -2.89
RNU6-239P-201ENST00000390990 DSPP15924 2871 aaKnown RBP-3.02□□□□□ -2.89
RNU6-239P-201ENST00000390990 WDR87Q6ZQQ6 2873 aa-3.02□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms