RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 TRAV12-3A0A0B4J271 114 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 IGKV2-29A2NJV5 120 aaPredicted RBP0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 FAM24AA6NFZ4 105 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 HIGD1CA8MV81 97 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 M0R143 59 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 MPC2O95563 127 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 KRTAP12-3P60328 96 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 S100A10P60903 97 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 C12orf73Q69YU5 71 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 PP632Q6XCG6 107 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 NDUFA11Q86Y39 141 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 KRTAP13-1Q8IUC0 172 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 C10orf82Q8WW14 230 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 LINC00208Q96KT6 92 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 SPANXDQ9BXN6 97 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 CYSTM1Q9H1C7 97 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 DPH3P1Q9H4G8 78 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 C22orf24Q9Y442 160 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 SMARCA2P51531 1590 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 FAM135AQ9P2D6 1515 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 PRRC2BQ5JSZ5 2229 aaKnown RBP0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 A2ML1A8K2U0 1454 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 PZPP20742 1482 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 MYOM2P54296 1465 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 BCL9LQ86UU0 1499 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 DOCK11Q5JSL3 2073 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 IGKV2-40A0A087WW87 121 aaPredicted RBP0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 TRAV13-2A0A0B4J235 113 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 PIGBOS1A0A0B4J2F0 54 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 TRBV10-3A0A0K0K1G6 114 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 NBDYA0A0U1RRE5 68 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 HCG22E2RYF7 251 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 IGKV2D-40P01614 121 aaPredicted RBP0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 SNCAP37840 140 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 RPL37AP61513 92 aaKnown RBP0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 PKIAP61925 76 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 DCDP81605 110 aaKnown RBP0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 LCE3AQ5TA76 89 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 CYP2G1PQ6ZSU1 146 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 C5orf38Q86SI9 138 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 TTC9CQ8N5M4 171 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 AQP10Q96PS8 301 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 LINC00474Q9P2X8 69 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 MED13LQ71F56 2210 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 EIF4G3O43432 1585 aaKnown RBP0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 ADGRB2O60241 1585 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 MUC22E2RYF6 1773 aaPredicted RBP0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 RBBP6Q7Z6E9 1792 aaKnown RBP0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 PTPRMP28827 1452 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 MRC2Q9UBG0 1479 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 CACNA1BQ00975 2339 aa0.47□□□□□ -2.33
TRAJ3-201ENST00000390534 CTTNBP2Q8WZ74 1663 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 FLG2Q5D862 2391 aaPredicted RBP0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 FBN1P35555 2871 aaKnown RBP0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 TEX49A0A1B0GTD5 131 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 UBE2L5PA0A1B0GUS4 154 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 RBAKDNA6NC62 111 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 TMEM262E9PQX1 116 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 SSSCA1O60232 199 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 SIX6O95475 246 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 ELOF1P60002 83 aaKnown RBP0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 UBE2L3P68036 154 aaKnown RBP0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 CCL8P80075 99 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 FXYD3Q14802 87 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 ZNF56Q15929 161 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 COL5A1-AS1Q5SY13 56 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 C10orf128Q5T292 105 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 XAF1Q6GPH4 301 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 COMMD6Q7Z4G1 85 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 DEFB132Q7Z7B7 95 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 Q86TA4 180 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 C20orf197Q8N268 126 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 C5orf56Q8N8D9 126 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 TSLPQ969D9 159 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 AMELYQ99218 206 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 SNHG12Q9BXW3 62 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 LINC00312Q9Y6C7 94 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 ABCA1O95477 2261 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 RP1L1Q8IWN7 2480 aaPredicted RBP0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 IFT140Q96RY7 1462 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 CNTLNQ9NXG0 1405 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 PI4KAP42356 2102 aa0.46□□□□□ -2.34
TRAJ3-201ENST00000390534 KNTC1P50748 2209 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 ZDBF2Q9HCK1 2354 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 DLG5Q8TDM6 1919 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 A0A1W2PPM0 123 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 CLPSL1A2RUU4 121 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 J3QKU1 62 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 FXYD1O00168 92 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 NCR3O14931 201 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 MT-ATP8P03928 68 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 LYNX1P0DP58 116 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 CCL3L1P16619 93 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 UBE2D1P51668 147 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 GNG2P59768 71 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 GNG11P61952 73 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 SSBP1Q04837 148 aaKnown RBP0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 ZNF818PQ6ZRF7 136 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 C4orf33Q8N1A6 199 aa0.45□□□□□ -2.34
TRAJ3-201ENST00000390534 DEFB119Q8N690 84 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms