RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 HLA-DRB4P13762 266 aa7.43□□□□□ -1.22
LTN1-203ENST00000389195 LINC00315P59091 139 aa7.43□□□□□ -1.22
LTN1-203ENST00000389195 CACNG7P62955 275 aa7.43□□□□□ -1.22
LTN1-203ENST00000389195 SCRT2Q9NQ03 307 aa7.43□□□□□ -1.22
LTN1-203ENST00000389195 HLA-DRB4X5D2U9 266 aa7.43□□□□□ -1.22
LTN1-203ENST00000389195 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
LTN1-203ENST00000389195 TMEM208Q9BTX3 173 aa7.43□□□□□ -1.22
LTN1-203ENST00000389195 MAP1LC3CQ9BXW4 147 aa7.43□□□□□ -1.22
LTN1-203ENST00000389195 ZNF56Q15929 161 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 SUMO4Q6EEV6 95 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 Q6ZSN1 163 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 STHQ8IWL8 128 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 TEX29Q8N6K0 151 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 TTTY13Q9BZ97 58 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 C16orf95Q9H693 158 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 MRPL16Q9NX20 251 aaKnown RBP7.42□□□□□ -1.22
LTN1-203ENST00000389195 IGLV2-18A0A075B6J9 118 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 PF4P02776 101 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 CTAG1AP78358 180 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 DEFB125Q8N687 156 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 DPH3P1Q9H4G8 78 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
LTN1-203ENST00000389195 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 EMP1P54849 157 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 RIPPLY3P57055 190 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 CSTL1Q9H114 145 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 KIR2DL5BA0A0G2JN68 375 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 KIR2DL5BA0A0G2JPC4 375 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 OR11H12B2RN74 326 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 HBDP02042 147 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 SMIM17P0DL12 118 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 RPL39P62891 51 aaKnown RBP7.41□□□□□ -1.22
LTN1-203ENST00000389195 KIR2DL5AQ8N109 375 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 LINC00482Q8N8I6 264 aa7.41□□□□□ -1.22
LTN1-203ENST00000389195 DUSP14O95147 198 aaKnown RBP7.4□□□□□ -1.22
LTN1-203ENST00000389195 CRYGDP07320 174 aa7.4□□□□□ -1.22
LTN1-203ENST00000389195 PRSS1P07477 247 aa7.4□□□□□ -1.22
LTN1-203ENST00000389195 AP1S3Q96PC3 154 aa7.4□□□□□ -1.22
LTN1-203ENST00000389195 NUDT3O95989 172 aa7.4□□□□□ -1.23
LTN1-203ENST00000389195 TSPOP30536 169 aa7.4□□□□□ -1.23
LTN1-203ENST00000389195 SUMO2P61956 95 aaKnown RBP7.4□□□□□ -1.23
LTN1-203ENST00000389195 Q6ZVH6 145 aa7.4□□□□□ -1.23
LTN1-203ENST00000389195 IFI27L1Q96BM0 104 aa7.4□□□□□ -1.23
LTN1-203ENST00000389195 SPAG8Q99932 426 aaPredicted RBP7.4□□□□□ -1.23
LTN1-203ENST00000389195 OPRPNQ99935 248 aaPredicted RBP7.4□□□□□ -1.23
LTN1-203ENST00000389195 SNHG12Q9BXW3 62 aa7.4□□□□□ -1.23
LTN1-203ENST00000389195 NBEAL1Q6ZS30 2694 aa7.4□□□□□ -1.23
LTN1-203ENST00000389195 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
LTN1-203ENST00000389195 C1orf158Q8N1D5 194 aa7.39□□□□□ -1.23
LTN1-203ENST00000389195 C9orf85Q96MD7 179 aa7.39□□□□□ -1.23
LTN1-203ENST00000389195 HSPB8Q9UJY1 196 aa7.39□□□□□ -1.23
LTN1-203ENST00000389195 A0A1B0GV90 55 aa7.39□□□□□ -1.23
LTN1-203ENST00000389195 Q6ZN92 141 aa7.39□□□□□ -1.23
LTN1-203ENST00000389195 IGHV3-38A0A0C4DH36 116 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 PPBPP02775 128 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 GIG44P09565 113 aaPredicted RBP7.38□□□□□ -1.23
LTN1-203ENST00000389195 IGLC3P0DOY3 106 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 Q8N8P6 123 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 NDUFAF3Q9BU61 184 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 ZMAT5Q9UDW3 170 aaKnown RBP7.38□□□□□ -1.23
LTN1-203ENST00000389195 TRAV9-2A0A087WT02 112 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 SMIM2Q9BVW6 85 aa7.38□□□□□ -1.23
LTN1-203ENST00000389195 CRLF1O75462 422 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 IGLV1-51P01701 117 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 LAGE3Q14657 143 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 TRBV7-9A0A0J9YWB2 115 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 DEFB4AO15263 64 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 FCER1GP30273 86 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 SAMD13Q5VXD3 122 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 CEMP1Q6PRD7 247 aaPredicted RBP7.37□□□□□ -1.23
LTN1-203ENST00000389195 ERASQ7Z444 233 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 MIEN1Q9BRT3 115 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 TMEM160Q9NX00 188 aa7.37□□□□□ -1.23
LTN1-203ENST00000389195 SDHAF1A6NFY7 115 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 RNASE13Q5GAN3 156 aaKnown RBP7.36□□□□□ -1.23
LTN1-203ENST00000389195 C19orf73Q9NVV2 129 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 GOLT1BQ9Y3E0 138 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 HINT1P49773 126 aaPredicted RBP7.36□□□□□ -1.23
LTN1-203ENST00000389195 SCGB2A2Q13296 93 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 DNLZQ5SXM8 178 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 Q6ZTI0 123 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 PHLDA1Q8WV24 401 aaPredicted RBP7.36□□□□□ -1.23
LTN1-203ENST00000389195 C20orf144Q9BQM9 153 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 NXT2Q9NPJ8 142 aaKnown RBP7.36□□□□□ -1.23
LTN1-203ENST00000389195 TENM3Q9P273 2699 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 TRGV1A0A0A0MS02 117 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 M0QY20 66 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 TRPT1Q86TN4 253 aaKnown RBP7.36□□□□□ -1.23
LTN1-203ENST00000389195 POM121L12Q8N7R1 296 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 C11orf72Q8NBR9 251 aa7.36□□□□□ -1.23
LTN1-203ENST00000389195 IGKV2D-26A0A0A0MRZ7 120 aa7.35□□□□□ -1.23
LTN1-203ENST00000389195 NDUFA7O95182 113 aa7.35□□□□□ -1.23
LTN1-203ENST00000389195 PCP2Q8IVA1 136 aa7.35□□□□□ -1.23
LTN1-203ENST00000389195 MRAP2Q96G30 205 aa7.35□□□□□ -1.23
LTN1-203ENST00000389195 ODF3Q96PU9 254 aa7.35□□□□□ -1.23
LTN1-203ENST00000389195 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
LTN1-203ENST00000389195 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms