RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 RIGQ13278 110 aa9.73□□□□□ -0.85
PRPF18-202ENST00000378572 H3BVH4 76 aa9.73□□□□□ -0.85
PRPF18-202ENST00000378572 S100A8P05109 93 aa9.73□□□□□ -0.85
PRPF18-202ENST00000378572 CACNG7P62955 275 aa9.73□□□□□ -0.85
PRPF18-202ENST00000378572 MRPL54Q6P161 138 aaKnown RBP9.73□□□□□ -0.85
PRPF18-202ENST00000378572 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.73□□□□□ -0.85
PRPF18-202ENST00000378572 C9orf85Q96MD7 179 aa9.73□□□□□ -0.85
PRPF18-202ENST00000378572 CBY3A6NI87 242 aa9.72□□□□□ -0.85
PRPF18-202ENST00000378572 SPINK4O60575 86 aa9.72□□□□□ -0.85
PRPF18-202ENST00000378572 HBBP68871 147 aa9.72□□□□□ -0.85
PRPF18-202ENST00000378572 GATD1Q8NB37 220 aa9.72□□□□□ -0.85
PRPF18-202ENST00000378572 TPPP3Q9BW30 176 aa9.72□□□□□ -0.85
PRPF18-202ENST00000378572 RTL8CO15255 209 aa9.71□□□□□ -0.85
PRPF18-202ENST00000378572 MT-ND6P03923 174 aa9.71□□□□□ -0.85
PRPF18-202ENST00000378572 GNB1LQ9BYB4 327 aa9.71□□□□□ -0.85
PRPF18-202ENST00000378572 MUC4Q99102 2169 aa9.71□□□□□ -0.86
PRPF18-202ENST00000378572 NXPH4O95158 308 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 ZNF415Q09FC8 603 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 MDFICQ9P1T7 246 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 A0A1B0GVY2 172 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 HLA-DQA1P01909 254 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 RPS10P46783 165 aaKnown RBP9.7□□□□□ -0.86
PRPF18-202ENST00000378572 ZNF493Q6ZR52 646 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 OR10AG1Q8NH19 301 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 TMEM263Q8WUH6 116 aaKnown RBP9.7□□□□□ -0.86
PRPF18-202ENST00000378572 PTH2Q96A98 100 aa9.7□□□□□ -0.86
PRPF18-202ENST00000378572 DNAH2Q9P225 4427 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 NTF3P20783 257 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 PIK3CD-AS1Q5SR53 167 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 SPANXN1Q5VSR9 72 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 ZFP82Q8N141 532 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
PRPF18-202ENST00000378572 SPXQ9BT56 116 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 FAT2Q9NYQ8 4349 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
PRPF18-202ENST00000378572 SNURFLB1AK76 121 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 HTN1P15515 57 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 CAMPP49913 170 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 C16orf74Q96GX8 76 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 DEFB130BP0DP73 79 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 DEFB130AP0DP74 79 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 TWIST1Q15672 202 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 SYT8Q8NBV8 401 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 TMEM191AQ9H0A3 160 aa9.68□□□□□ -0.86
PRPF18-202ENST00000378572 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
PRPF18-202ENST00000378572 DNAH17Q9UFH2 4485 aa9.67□□□□□ -0.86
PRPF18-202ENST00000378572 TRGC1P0CF51 173 aa9.67□□□□□ -0.86
PRPF18-202ENST00000378572 AZU1P20160 251 aa9.67□□□□□ -0.86
PRPF18-202ENST00000378572 C1orf134Q5TEV5 83 aa9.67□□□□□ -0.86
PRPF18-202ENST00000378572 TRAPPC1Q9Y5R8 145 aa9.67□□□□□ -0.86
PRPF18-202ENST00000378572 PKHD1P08F94 4074 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 M0R2P5 195 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 TRGC2P03986 189 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 PRM2P04554 102 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 RAB4BP61018 213 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 MSRB1Q9NZV6 116 aa9.66□□□□□ -0.86
PRPF18-202ENST00000378572 F5H768 121 aa9.65□□□□□ -0.86
PRPF18-202ENST00000378572 M0R381 172 aa9.65□□□□□ -0.86
PRPF18-202ENST00000378572 PHOX2AO14813 284 aa9.65□□□□□ -0.86
PRPF18-202ENST00000378572 NUDT3O95989 172 aa9.65□□□□□ -0.86
PRPF18-202ENST00000378572 SMIM15Q7Z3B0 74 aa9.65□□□□□ -0.86
PRPF18-202ENST00000378572 AP1S3Q96PC3 154 aa9.65□□□□□ -0.86
PRPF18-202ENST00000378572 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
PRPF18-202ENST00000378572 LYRM9A8MSI8 78 aa9.65□□□□□ -0.87
PRPF18-202ENST00000378572 CTAG1AP78358 180 aa9.65□□□□□ -0.87
PRPF18-202ENST00000378572 FABP9Q0Z7S8 132 aa9.65□□□□□ -0.87
PRPF18-202ENST00000378572 DAZ2Q13117 558 aaKnown RBP9.65□□□□□ -0.87
PRPF18-202ENST00000378572 Q6ZR54 194 aa9.65□□□□□ -0.87
PRPF18-202ENST00000378572 FRZBQ92765 325 aa9.65□□□□□ -0.87
PRPF18-202ENST00000378572 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
PRPF18-202ENST00000378572 C1orf196B1AJZ1 125 aa9.64□□□□□ -0.87
PRPF18-202ENST00000378572 SSTP61278 116 aa9.64□□□□□ -0.87
PRPF18-202ENST00000378572 SLAQ13239 276 aa9.64□□□□□ -0.87
PRPF18-202ENST00000378572 FAM104BQ5XKR9 115 aa9.64□□□□□ -0.87
PRPF18-202ENST00000378572 APCSP02743 223 aa9.63□□□□□ -0.87
PRPF18-202ENST00000378572 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
PRPF18-202ENST00000378572 RASL10AQ92737 203 aa9.63□□□□□ -0.87
PRPF18-202ENST00000378572 EVI2AP22794 236 aa9.62□□□□□ -0.87
PRPF18-202ENST00000378572 DPH3P1Q9H4G8 78 aa9.62□□□□□ -0.87
PRPF18-202ENST00000378572 DNAH11Q96DT5 4516 aa9.62□□□□□ -0.87
PRPF18-202ENST00000378572 A8MWV9 139 aa9.62□□□□□ -0.87
PRPF18-202ENST00000378572 ATP5G1P05496 136 aa9.62□□□□□ -0.87
PRPF18-202ENST00000378572 RAB5BP61020 215 aa9.62□□□□□ -0.87
PRPF18-202ENST00000378572 KIF25-AS1Q9Y6Z4 181 aa9.62□□□□□ -0.87
PRPF18-202ENST00000378572 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
PRPF18-202ENST00000378572 NACAE9PAV3 2078 aa9.61□□□□□ -0.87
PRPF18-202ENST00000378572 AMN1Q8IY45 258 aa9.61□□□□□ -0.87
PRPF18-202ENST00000378572 RNF185Q96GF1 192 aa9.61□□□□□ -0.87
PRPF18-202ENST00000378572 SMIM17P0DL12 118 aa9.6□□□□□ -0.87
PRPF18-202ENST00000378572 RAB4AP20338 218 aa9.6□□□□□ -0.87
PRPF18-202ENST00000378572 CCL18P55774 89 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms