RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 PFN2P35080 140 aa11.36□□□□□ -0.59
PRDM16-203ENST00000378391 LOXL1Q08397 574 aaPredicted RBP11.36□□□□□ -0.59
PRDM16-203ENST00000378391 SLC25A29Q8N8R3 303 aa11.36□□□□□ -0.59
PRDM16-203ENST00000378391 LINC01545Q5VT33 79 aa11.36□□□□□ -0.59
PRDM16-203ENST00000378391 DYNAPQ8N1N2 210 aa11.36□□□□□ -0.59
PRDM16-203ENST00000378391 IGHV7-4-1A0A0J9YVY3 117 aa11.35□□□□□ -0.59
PRDM16-203ENST00000378391 C10orf142B7Z368 130 aa11.35□□□□□ -0.59
PRDM16-203ENST00000378391 LINC00694P0DN24 101 aa11.35□□□□□ -0.59
PRDM16-203ENST00000378391 RHOHQ15669 191 aa11.35□□□□□ -0.59
PRDM16-203ENST00000378391 TRAV13-2A0A0B4J235 113 aa11.34□□□□□ -0.59
PRDM16-203ENST00000378391 GP9P14770 177 aa11.34□□□□□ -0.59
PRDM16-203ENST00000378391 ATP5EP56381 51 aaPredicted RBP11.34□□□□□ -0.59
PRDM16-203ENST00000378391 PROP1O75360 226 aa11.34□□□□□ -0.59
PRDM16-203ENST00000378391 ORMDL1Q9P0S3 153 aa11.34□□□□□ -0.59
PRDM16-203ENST00000378391 H3BUA1 57 aa11.34□□□□□ -0.59
PRDM16-203ENST00000378391 SP5Q6BEB4 398 aaPredicted RBP11.34□□□□□ -0.59
PRDM16-203ENST00000378391 LHBP01229 141 aa11.34□□□□□ -0.59
PRDM16-203ENST00000378391 RNF114Q9Y508 228 aa11.33□□□□□ -0.6
PRDM16-203ENST00000378391 SMIM26A0A096LP01 95 aa11.33□□□□□ -0.6
PRDM16-203ENST00000378391 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
PRDM16-203ENST00000378391 MED13Q9UHV7 2174 aa11.33□□□□□ -0.6
PRDM16-203ENST00000378391 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.6
PRDM16-203ENST00000378391 SCRT2Q9NQ03 307 aa11.32□□□□□ -0.6
PRDM16-203ENST00000378391 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
PRDM16-203ENST00000378391 CFHR4Q92496 578 aa11.32□□□□□ -0.6
PRDM16-203ENST00000378391 EIF4EBP1Q13541 118 aaPredicted RBP11.32□□□□□ -0.6
PRDM16-203ENST00000378391 PATE2Q6UY27 113 aa11.32□□□□□ -0.6
PRDM16-203ENST00000378391 PLCE1Q9P212 2302 aa11.32□□□□□ -0.6
PRDM16-203ENST00000378391 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
PRDM16-203ENST00000378391 IGHV3-38A0A0C4DH36 116 aa11.32□□□□□ -0.6
PRDM16-203ENST00000378391 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
PRDM16-203ENST00000378391 CCDC179H3BU77 68 aa11.31□□□□□ -0.6
PRDM16-203ENST00000378391 IGKV1-17P01599 117 aa11.31□□□□□ -0.6
PRDM16-203ENST00000378391 SHISA2Q6UWI4 295 aa11.31□□□□□ -0.6
PRDM16-203ENST00000378391 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
PRDM16-203ENST00000378391 FOXE3Q13461 319 aa11.3□□□□□ -0.6
PRDM16-203ENST00000378391 IGKV1OR2-108A0A075B7D4 117 aa11.3□□□□□ -0.6
PRDM16-203ENST00000378391 I3L2K1 104 aa11.3□□□□□ -0.6
PRDM16-203ENST00000378391 FAM167A-AS1Q96KT0 104 aa11.3□□□□□ -0.6
PRDM16-203ENST00000378391 CTRLP40313 264 aa11.3□□□□□ -0.6
PRDM16-203ENST00000378391 PLA2G2CQ5R387 149 aa11.3□□□□□ -0.6
PRDM16-203ENST00000378391 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
PRDM16-203ENST00000378391 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
PRDM16-203ENST00000378391 TRAV23DV6A0A075B6W5 121 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 UBE2AP49459 152 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 K7EIM0 57 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 GNRH2O43555 120 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 SPRNQ5BIV9 151 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 UBE2DNLQ8IWF7 75 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 PRR15LQ9BU68 103 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 RNF223E7ERA6 249 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
PRDM16-203ENST00000378391 UBE2BP63146 152 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 ATRXP46100 2492 aa11.29□□□□□ -0.6
PRDM16-203ENST00000378391 IGLC6P0CF74 106 aa11.28□□□□□ -0.6
PRDM16-203ENST00000378391 CFHR3Q02985 330 aa11.28□□□□□ -0.6
PRDM16-203ENST00000378391 J3QLI3 93 aa11.28□□□□□ -0.6
PRDM16-203ENST00000378391 MED12LQ86YW9 2145 aa11.28□□□□□ -0.6
PRDM16-203ENST00000378391 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
PRDM16-203ENST00000378391 NXPH4O95158 308 aa11.27□□□□□ -0.6
PRDM16-203ENST00000378391 LINC00310P59036 64 aa11.27□□□□□ -0.6
PRDM16-203ENST00000378391 HIGD1BQ9P298 99 aa11.27□□□□□ -0.6
PRDM16-203ENST00000378391 NPBQ8NG41 125 aa11.27□□□□□ -0.61
PRDM16-203ENST00000378391 TRBV10-2A0A0K0K1G8 114 aa11.26□□□□□ -0.61
PRDM16-203ENST00000378391 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
PRDM16-203ENST00000378391 GTSF1Q8WW33 167 aa11.26□□□□□ -0.61
PRDM16-203ENST00000378391 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
PRDM16-203ENST00000378391 ZGRF1Q86YA3 2104 aa11.26□□□□□ -0.61
PRDM16-203ENST00000378391 PRO0628Q9UI54 55 aa11.26□□□□□ -0.61
PRDM16-203ENST00000378391 C2orf70A6NJV1 201 aa11.26□□□□□ -0.61
PRDM16-203ENST00000378391 CRYGCP07315 174 aa11.26□□□□□ -0.61
PRDM16-203ENST00000378391 Q8N7P7 452 aa11.25□□□□□ -0.61
PRDM16-203ENST00000378391 H3BT86 120 aa11.25□□□□□ -0.61
PRDM16-203ENST00000378391 MSRB1Q9NZV6 116 aa11.25□□□□□ -0.61
PRDM16-203ENST00000378391 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
PRDM16-203ENST00000378391 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
PRDM16-203ENST00000378391 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
PRDM16-203ENST00000378391 NDUFC1O43677 76 aa11.24□□□□□ -0.61
PRDM16-203ENST00000378391 CTSGP08311 255 aa11.24□□□□□ -0.61
PRDM16-203ENST00000378391 PCNX2A6NKB5 2137 aa11.24□□□□□ -0.61
PRDM16-203ENST00000378391 HOXB4P17483 251 aaPredicted RBP11.24□□□□□ -0.61
PRDM16-203ENST00000378391 NANOS2P60321 138 aaKnown RBP11.24□□□□□ -0.61
PRDM16-203ENST00000378391 NREPQ16612 68 aa11.24□□□□□ -0.61
PRDM16-203ENST00000378391 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
PRDM16-203ENST00000378391 TP73-AS1Q9UF72 201 aa11.24□□□□□ -0.61
PRDM16-203ENST00000378391 IGFL2Q6UWQ7 119 aa11.24□□□□□ -0.61
PRDM16-203ENST00000378391 IGHV7-81A0A0B4J1V7 117 aa11.23□□□□□ -0.61
PRDM16-203ENST00000378391 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
PRDM16-203ENST00000378391 Q9H8V8 135 aa11.23□□□□□ -0.61
PRDM16-203ENST00000378391 EXPH5Q8NEV8 1989 aa11.23□□□□□ -0.61
PRDM16-203ENST00000378391 PSCAO43653 123 aa11.23□□□□□ -0.61
PRDM16-203ENST00000378391 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
PRDM16-203ENST00000378391 FXYD2P54710 66 aa11.22□□□□□ -0.61
PRDM16-203ENST00000378391 NKAPP1Q8N9T2 125 aa11.22□□□□□ -0.61
PRDM16-203ENST00000378391 VPREB3Q9UKI3 123 aa11.22□□□□□ -0.61
PRDM16-203ENST00000378391 ICOSQ9Y6W8 199 aa11.22□□□□□ -0.61
PRDM16-203ENST00000378391 DYSFO75923 2080 aa11.22□□□□□ -0.61
PRDM16-203ENST00000378391 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms