RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 SYT8Q8NBV8 401 aa10.39□□□□□ -0.75
RAB4B-202ENST00000378307 ATP6V0E2Q8NHE4 81 aa10.39□□□□□ -0.75
RAB4B-202ENST00000378307 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
RAB4B-202ENST00000378307 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
RAB4B-202ENST00000378307 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
RAB4B-202ENST00000378307 Q8N3U1 123 aa10.38□□□□□ -0.75
RAB4B-202ENST00000378307 OR10AG1Q8NH19 301 aa10.38□□□□□ -0.75
RAB4B-202ENST00000378307 KRTAP17-1Q9BYP8 105 aa10.38□□□□□ -0.75
RAB4B-202ENST00000378307 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
RAB4B-202ENST00000378307 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 TRAV9-2A0A087WT02 112 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 EVI2AP22794 236 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.75
RAB4B-202ENST00000378307 MEF2BQ02080 365 aaPredicted RBP10.37□□□□□ -0.75
RAB4B-202ENST00000378307 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 OR10J3Q5JRS4 329 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 LELP1Q5T871 98 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
RAB4B-202ENST00000378307 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
RAB4B-202ENST00000378307 TEX46H3BTG2 121 aa10.36□□□□□ -0.75
RAB4B-202ENST00000378307 SNAI2O43623 268 aa10.36□□□□□ -0.75
RAB4B-202ENST00000378307 BCL2P10415 239 aa10.36□□□□□ -0.75
RAB4B-202ENST00000378307 NKX2-5P52952 324 aaPredicted RBP10.36□□□□□ -0.75
RAB4B-202ENST00000378307 LINC01556Q5JQF7 62 aa10.36□□□□□ -0.75
RAB4B-202ENST00000378307 ALKAL2Q6UX46 152 aa10.36□□□□□ -0.75
RAB4B-202ENST00000378307 MSRB1Q9NZV6 116 aa10.36□□□□□ -0.75
RAB4B-202ENST00000378307 RHODO00212 210 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 IGHV3-30P01768 117 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 IGHV3-33P01772 117 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 CXCL1P09341 107 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 IGHV3-30-3P0DP02 117 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 IGHV3-30-5P0DP03 117 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 GZMBP10144 247 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 SSTP61278 116 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
RAB4B-202ENST00000378307 TRAV8-6A0A0B4J262 113 aa10.34□□□□□ -0.75
RAB4B-202ENST00000378307 C19orf71A6NCJ1 209 aa10.34□□□□□ -0.75
RAB4B-202ENST00000378307 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
RAB4B-202ENST00000378307 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
RAB4B-202ENST00000378307 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
RAB4B-202ENST00000378307 K7EP13 123 aa10.33□□□□□ -0.76
RAB4B-202ENST00000378307 PDE6DO43924 150 aa10.33□□□□□ -0.76
RAB4B-202ENST00000378307 IFNA1P01562 189 aa10.33□□□□□ -0.76
RAB4B-202ENST00000378307 NFE4Q86UQ8 179 aa10.33□□□□□ -0.76
RAB4B-202ENST00000378307 VAX2Q9UIW0 290 aa10.33□□□□□ -0.76
RAB4B-202ENST00000378307 RBFOX3A6NFN3 312 aa10.32□□□□□ -0.76
RAB4B-202ENST00000378307 GNG4P50150 75 aa10.32□□□□□ -0.76
RAB4B-202ENST00000378307 C10orf126Q8N4M7 172 aa10.32□□□□□ -0.76
RAB4B-202ENST00000378307 A0A087WTM6 91 aa10.31□□□□□ -0.76
RAB4B-202ENST00000378307 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
RAB4B-202ENST00000378307 OR2D3Q8NGH3 330 aa10.31□□□□□ -0.76
RAB4B-202ENST00000378307 LYPD6BQ8NI32 183 aa10.31□□□□□ -0.76
RAB4B-202ENST00000378307 KIF25-AS1Q9Y6Z4 181 aa10.31□□□□□ -0.76
RAB4B-202ENST00000378307 PCLOQ9Y6V0 5065 aa10.31□□□□□ -0.76
RAB4B-202ENST00000378307 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
RAB4B-202ENST00000378307 ERVFC1-1P60608 527 aa10.3□□□□□ -0.76
RAB4B-202ENST00000378307 SPANXN1Q5VSR9 72 aa10.3□□□□□ -0.76
RAB4B-202ENST00000378307 KRTAP4-5Q9BYR2 181 aa10.3□□□□□ -0.76
RAB4B-202ENST00000378307 Q9HAA7 133 aa10.3□□□□□ -0.76
RAB4B-202ENST00000378307 TRBV10-1A0A0K0K1A3 114 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 K7EN84 100 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 RAB4BP61018 213 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 UBE2D3P61077 147 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 UBE2D2P62837 147 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 ZNF56Q15929 161 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 DAZ4Q86SG3 579 aaKnown RBP10.29□□□□□ -0.76
RAB4B-202ENST00000378307 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 OCC1Q8TAD7 63 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 DAZAP1Q96EP5 407 aaKnown RBP10.29□□□□□ -0.76
RAB4B-202ENST00000378307 SMIM12Q96EX1 92 aa10.29□□□□□ -0.76
RAB4B-202ENST00000378307 DAZ3Q9NR90 486 aaKnown RBP10.29□□□□□ -0.76
RAB4B-202ENST00000378307 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
RAB4B-202ENST00000378307 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
RAB4B-202ENST00000378307 NUDT10Q8NFP7 164 aa10.28□□□□□ -0.76
RAB4B-202ENST00000378307 OR10G8Q8NGN5 311 aa10.28□□□□□ -0.76
RAB4B-202ENST00000378307 NUDT11Q96G61 164 aa10.28□□□□□ -0.76
RAB4B-202ENST00000378307 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
RAB4B-202ENST00000378307 FAT1Q14517 4588 aa10.28□□□□□ -0.76
RAB4B-202ENST00000378307 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
RAB4B-202ENST00000378307 LRCOL1A6NCL2 159 aa10.27□□□□□ -0.77
RAB4B-202ENST00000378307 CDK2AP2O75956 126 aa10.27□□□□□ -0.77
RAB4B-202ENST00000378307 P01737 135 aa10.27□□□□□ -0.77
RAB4B-202ENST00000378307 TAGLN2P37802 199 aaKnown RBP10.27□□□□□ -0.77
RAB4B-202ENST00000378307 RPL36AP83881 106 aaKnown RBP10.27□□□□□ -0.77
RAB4B-202ENST00000378307 RPL36ALQ969Q0 106 aaKnown RBP10.27□□□□□ -0.77
RAB4B-202ENST00000378307 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
RAB4B-202ENST00000378307 ABCA13Q86UQ4 5058 aa10.26□□□□□ -0.77
RAB4B-202ENST00000378307 A0A087WWC5 75 aa10.26□□□□□ -0.77
RAB4B-202ENST00000378307 RPS20P60866 119 aaKnown RBP10.26□□□□□ -0.77
RAB4B-202ENST00000378307 LYZL1Q6UWQ5 148 aa10.26□□□□□ -0.77
RAB4B-202ENST00000378307 NIT1Q86X76 327 aa10.26□□□□□ -0.77
RAB4B-202ENST00000378307 RNASE7Q9H1E1 156 aaKnown RBP10.26□□□□□ -0.77
RAB4B-202ENST00000378307 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
RAB4B-202ENST00000378307 F5H697 171 aa10.25□□□□□ -0.77
RAB4B-202ENST00000378307 EREGO14944 169 aa10.24□□□□□ -0.77
RAB4B-202ENST00000378307 AP1S3Q96PC3 154 aa10.24□□□□□ -0.77
RAB4B-202ENST00000378307 TMEM250H0YL14 139 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 PSCAO43653 123 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 SMIM17P0DL12 118 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms