RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PTH2Q96A98 100 aa7.52□□□□□ -1.21
PDPN-203ENST00000376061 RNF183Q96D59 192 aa7.52□□□□□ -1.21
PDPN-203ENST00000376061 MRPL16Q9NX20 251 aaKnown RBP7.52□□□□□ -1.21
PDPN-203ENST00000376061 SMIM9A6NGZ8 99 aa7.51□□□□□ -1.21
PDPN-203ENST00000376061 KIAA1644Q3SXP7 199 aa7.51□□□□□ -1.21
PDPN-203ENST00000376061 FAM104BQ5XKR9 115 aa7.51□□□□□ -1.21
PDPN-203ENST00000376061 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
PDPN-203ENST00000376061 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
PDPN-203ENST00000376061 JPT2Q9H910 190 aa7.51□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 RAB5BP61020 215 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 DAZ2Q13117 558 aaKnown RBP7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
PDPN-203ENST00000376061 PIK3CD-AS1Q5SR53 167 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 SMIM15Q7Z3B0 74 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 C14orf178Q8N769 122 aaPredicted RBP7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 KRTAP9-9Q9BYP9 154 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 KRTAP9-4Q9BYQ2 154 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 RETNQ9HD89 108 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 KIF25-AS1Q9Y6Z4 181 aa7.5□□□□□ -1.21
PDPN-203ENST00000376061 TRGV1A0A0A0MS02 117 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 RAB4AP20338 218 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 MAJINQ3KP22 176 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 MRPL51Q4U2R6 128 aaKnown RBP7.49□□□□□ -1.21
PDPN-203ENST00000376061 Q6ZTI0 123 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 Q8NAQ8 132 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 RASL10AQ92737 203 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 OVOL2Q9BRP0 275 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 NDUFAF3Q9BU61 184 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 SAMD10Q9BYL1 202 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 NOP10Q9NPE3 64 aaKnown RBP7.49□□□□□ -1.21
PDPN-203ENST00000376061 TP53TG1Q9Y2A0 90 aa7.49□□□□□ -1.21
PDPN-203ENST00000376061 A0A087WWL8 130 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 IGHV4-28A0A0C4DH34 117 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 NCR2O95944 276 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 CRYGDP07320 174 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 MGPP08493 103 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 MIFP14174 115 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 SRIP30626 198 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 EMP1P54849 157 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 LINC00315P59091 139 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 LGALS9BQ3B8N2 356 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 ALKBH7Q9BT30 221 aaPredicted RBP7.48□□□□□ -1.21
PDPN-203ENST00000376061 U3KQK5 164 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
PDPN-203ENST00000376061 A8MWV9 139 aa7.47□□□□□ -1.21
PDPN-203ENST00000376061 D6R8Y8 96 aa7.47□□□□□ -1.21
PDPN-203ENST00000376061 SMKR1H3BMG3 65 aa7.47□□□□□ -1.21
PDPN-203ENST00000376061 SMIM17P0DL12 118 aa7.47□□□□□ -1.21
PDPN-203ENST00000376061 FAM74A4Q5TZK3 123 aa7.47□□□□□ -1.21
PDPN-203ENST00000376061 CFAP126Q5VTH2 177 aa7.47□□□□□ -1.21
PDPN-203ENST00000376061 POM121L12Q8N7R1 296 aa7.47□□□□□ -1.21
PDPN-203ENST00000376061 TRAV26-2A0A0B4J265 109 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 DEFB4AO15263 64 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 RS1O15537 224 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 GAS8-AS1O95177 125 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 CKS2P33552 79 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 UFSP1Q6NVU6 142 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 SBSPONQ8IVN8 264 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 ORMDL3Q8N138 153 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 LINC00612Q8N6U2 182 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 MRAP2Q96G30 205 aa7.46□□□□□ -1.21
PDPN-203ENST00000376061 GAGE12BA1L429 117 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 RHODO00212 210 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 GAGE7O76087 117 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 PPBPP02775 128 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 GAGE12FP0CL80 117 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 GAGE12GP0CL81 117 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 GAGE12IP0CL82 117 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 GATA1P15976 413 aaPredicted RBP7.46□□□□□ -1.22
PDPN-203ENST00000376061 ZNF56Q15929 161 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 DEFB121Q5J5C9 76 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 SUMO4Q6EEV6 95 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 C18orf32Q8TCD1 76 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 PRELID3AQ96N28 172 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 TM2D3Q9BRN9 247 aa7.46□□□□□ -1.22
PDPN-203ENST00000376061 TRAV4A0A0B4J268 109 aa7.45□□□□□ -1.22
PDPN-203ENST00000376061 NPYP01303 97 aa7.45□□□□□ -1.22
PDPN-203ENST00000376061 IQCJQ1A5X6 159 aa7.45□□□□□ -1.22
PDPN-203ENST00000376061 FAM222AQ5U5X8 452 aa7.45□□□□□ -1.22
PDPN-203ENST00000376061 NRACQ8N912 160 aa7.45□□□□□ -1.22
PDPN-203ENST00000376061 SPATA25Q9BR10 227 aa7.45□□□□□ -1.22
PDPN-203ENST00000376061 DKK2Q9UBU2 259 aa7.45□□□□□ -1.22
PDPN-203ENST00000376061 TRGV2A0A075B6R0 118 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 IGHV3-73A0A0B4J1V6 119 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 LYRM9A8MSI8 78 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 F5H697 171 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 IGHV3-53P01767 116 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 NDUFA6P56556 154 aa7.44□□□□□ -1.22
PDPN-203ENST00000376061 Q0VG73 95 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms