RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
LSM2-208ENST00000375661 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 RS1O15537 224 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 GATCO43716 136 aaKnown RBP8.39□□□□□ -1.07
LSM2-208ENST00000375661 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 ADIRFQ15847 76 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 UPK3BQ9BT76 320 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 OSTCQ9NRP0 149 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 PHLDA3Q9Y5J5 127 aa8.39□□□□□ -1.07
LSM2-208ENST00000375661 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 MUC21A0A0G2JKD1 596 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 MUC21A0A140T8X8 626 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 TMEM218A2RU14 115 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 ADCYAP1P18509 176 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 FHL2Q14192 279 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 OR4C5Q8NGB2 326 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 OR10AG1Q8NH19 301 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 JPT2Q9H910 190 aa8.38□□□□□ -1.07
LSM2-208ENST00000375661 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
LSM2-208ENST00000375661 XKRY2A2RUG3 117 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 M0R381 172 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 NXPH4O95158 308 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 CT83Q5H943 113 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 ZFP82Q8N141 532 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 FER1L6-AS1Q8NA97 138 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 SYT8Q8NBV8 401 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 GTSF1Q8WW33 167 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 SFRP2Q96HF1 295 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 V9GYV3 84 aa8.37□□□□□ -1.07
LSM2-208ENST00000375661 A8MWV9 139 aa8.36□□□□□ -1.07
LSM2-208ENST00000375661 H3BNG1 76 aa8.36□□□□□ -1.07
LSM2-208ENST00000375661 UFSP1Q6NVU6 142 aa8.36□□□□□ -1.07
LSM2-208ENST00000375661 LYZL1Q6UWQ5 148 aa8.36□□□□□ -1.07
LSM2-208ENST00000375661 OR10G8Q8NGN5 311 aa8.36□□□□□ -1.07
LSM2-208ENST00000375661 VSIG2Q96IQ7 327 aa8.36□□□□□ -1.07
LSM2-208ENST00000375661 SAMD10Q9BYL1 202 aa8.36□□□□□ -1.07
LSM2-208ENST00000375661 TRAV26-1A0A087WT03 109 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 A0A0J9YY99 117 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 A8MWL6 223 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 CRYGDP07320 174 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 CTRLP40313 264 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 FOXA3P55318 350 aaPredicted RBP8.35□□□□□ -1.07
LSM2-208ENST00000375661 SSTP61278 116 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 C15orf54Q8N8G6 183 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 TPPP3Q9BW30 176 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
LSM2-208ENST00000375661 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
LSM2-208ENST00000375661 IGHV3-73A0A0B4J1V6 119 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 F2Z2F3 143 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 F8W036 122 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 CIDEAO60543 219 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
LSM2-208ENST00000375661 CRYBA4P53673 196 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 SPANXN1Q5VSR9 72 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 CDPF1Q6NVV7 123 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 Q6ZSN1 163 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 MSRB1Q9NZV6 116 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
LSM2-208ENST00000375661 A0A087WWL8 130 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 CACNG7P62955 275 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
LSM2-208ENST00000375661 SLAQ13239 276 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 ESRGQ1W209 222 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 WDR73Q6P4I2 378 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 ZFP2Q6ZN57 461 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 PGLYRP4Q96LB8 373 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 SEC11CQ9BY50 192 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 CNFNQ9BYD5 112 aa8.33□□□□□ -1.08
LSM2-208ENST00000375661 FAM231BA6NCW3 169 aa8.32□□□□□ -1.08
LSM2-208ENST00000375661 EREGO14944 169 aa8.32□□□□□ -1.08
LSM2-208ENST00000375661 PAX4O43316 350 aa8.32□□□□□ -1.08
LSM2-208ENST00000375661 NTF3P20783 257 aa8.32□□□□□ -1.08
LSM2-208ENST00000375661 C10orf91Q5T1B1 145 aa8.32□□□□□ -1.08
LSM2-208ENST00000375661 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
LSM2-208ENST00000375661 KIF25-AS1Q9Y6Z4 181 aa8.32□□□□□ -1.08
LSM2-208ENST00000375661 A0A096LPF7 62 aa8.31□□□□□ -1.08
LSM2-208ENST00000375661 HIGD1CA8MV81 97 aa8.31□□□□□ -1.08
LSM2-208ENST00000375661 LINC00315P59091 139 aa8.31□□□□□ -1.08
LSM2-208ENST00000375661 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
LSM2-208ENST00000375661 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
LSM2-208ENST00000375661 C14orf178Q8N769 122 aaPredicted RBP8.31□□□□□ -1.08
LSM2-208ENST00000375661 SLC25A29Q8N8R3 303 aa8.31□□□□□ -1.08
LSM2-208ENST00000375661 FRZBQ92765 325 aa8.31□□□□□ -1.08
LSM2-208ENST00000375661 HERC1Q15751 4861 aa8.31□□□□□ -1.08
LSM2-208ENST00000375661 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
LSM2-208ENST00000375661 LOC100131303A0A0U1RQF7 123 aa8.3□□□□□ -1.08
LSM2-208ENST00000375661 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
LSM2-208ENST00000375661 SMIM27A0A1W2PRY6 76 aa8.3□□□□□ -1.08
LSM2-208ENST00000375661 RHODO00212 210 aa8.3□□□□□ -1.08
LSM2-208ENST00000375661 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms