RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 OR2D3Q8NGH3 330 aa14.85□□□□□ -0.03
NINJ1-201ENST00000375446 BIN3Q9NQY0 253 aa14.85□□□□□ -0.03
NINJ1-201ENST00000375446 BTF3P20290 206 aaKnown RBP14.84□□□□□ -0.03
NINJ1-201ENST00000375446 RPS20P60866 119 aaKnown RBP14.84□□□□□ -0.03
NINJ1-201ENST00000375446 MUC21A0A0G2JKD1 596 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 MUC21A0A140T8X8 626 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 GAGE12JA6NER3 117 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 TMEM250H0YL14 139 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 P01737 135 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 GAGE1Q13065 139 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 GAGE4Q13068 117 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 GAGE5Q13069 117 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 GAGE13Q4V321 117 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 SPANXN1Q5VSR9 72 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 ATP6V0E2Q8NHE4 81 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 Q9UF83 564 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 LY96Q9Y6Y9 160 aa14.83□□□□□ -0.04
NINJ1-201ENST00000375446 GZMBP10144 247 aa14.82□□□□□ -0.04
NINJ1-201ENST00000375446 TNP2Q05952 138 aa14.82□□□□□ -0.04
NINJ1-201ENST00000375446 TOR2AQ5JU69 321 aa14.82□□□□□ -0.04
NINJ1-201ENST00000375446 TRAV9-2A0A087WT02 112 aa14.81□□□□□ -0.04
NINJ1-201ENST00000375446 DNAH10OSP0CZ25 163 aa14.81□□□□□ -0.04
NINJ1-201ENST00000375446 LINC00694P0DN24 101 aa14.81□□□□□ -0.04
NINJ1-201ENST00000375446 FER1L6-AS1Q8NA97 138 aa14.81□□□□□ -0.04
NINJ1-201ENST00000375446 GTSF1LQ9H1H1 148 aa14.81□□□□□ -0.04
NINJ1-201ENST00000375446 XKRY2A2RUG3 117 aa14.8□□□□□ -0.04
NINJ1-201ENST00000375446 IGLC6P0CF74 106 aa14.8□□□□□ -0.04
NINJ1-201ENST00000375446 LINC00315P59091 139 aa14.8□□□□□ -0.04
NINJ1-201ENST00000375446 SSTP61278 116 aa14.8□□□□□ -0.04
NINJ1-201ENST00000375446 OCC1Q8TAD7 63 aa14.8□□□□□ -0.04
NINJ1-201ENST00000375446 TPPP3Q9BW30 176 aa14.8□□□□□ -0.04
NINJ1-201ENST00000375446 EIF5A2Q9GZV4 153 aaKnown RBP14.8□□□□□ -0.04
NINJ1-201ENST00000375446 TRAV8-6A0A0B4J262 113 aa14.79□□□□□ -0.04
NINJ1-201ENST00000375446 EVI2AP22794 236 aa14.79□□□□□ -0.04
NINJ1-201ENST00000375446 OR10J3Q5JRS4 329 aa14.79□□□□□ -0.04
NINJ1-201ENST00000375446 LELP1Q5T871 98 aa14.79□□□□□ -0.04
NINJ1-201ENST00000375446 NUDT10Q8NFP7 164 aa14.79□□□□□ -0.04
NINJ1-201ENST00000375446 NUDT11Q96G61 164 aa14.79□□□□□ -0.04
NINJ1-201ENST00000375446 FAM210AQ96ND0 272 aa14.79□□□□□ -0.04
NINJ1-201ENST00000375446 K7EN84 100 aa14.78□□□□□ -0.04
NINJ1-201ENST00000375446 K7EP13 123 aa14.78□□□□□ -0.04
NINJ1-201ENST00000375446 PKD1P98161 4303 aa14.78□□□□□ -0.04
NINJ1-201ENST00000375446 IGHV3-38A0A0C4DH36 116 aa14.77□□□□□ -0.05
NINJ1-201ENST00000375446 CEBPGP53567 150 aa14.77□□□□□ -0.05
NINJ1-201ENST00000375446 RAB4BP61018 213 aa14.77□□□□□ -0.05
NINJ1-201ENST00000375446 TRBV10-1A0A0K0K1A3 114 aa14.76□□□□□ -0.05
NINJ1-201ENST00000375446 NDUFS6O75380 124 aaKnown RBP14.76□□□□□ -0.05
NINJ1-201ENST00000375446 ZNF56Q15929 161 aa14.76□□□□□ -0.05
NINJ1-201ENST00000375446 TEX261Q6UWH6 196 aa14.76□□□□□ -0.05
NINJ1-201ENST00000375446 AP1S3Q96PC3 154 aa14.76□□□□□ -0.05
NINJ1-201ENST00000375446 RNASE7Q9H1E1 156 aaKnown RBP14.76□□□□□ -0.05
NINJ1-201ENST00000375446 DNAH11Q96DT5 4516 aa14.76□□□□□ -0.05
NINJ1-201ENST00000375446 F2Z2F3 143 aa14.75□□□□□ -0.05
NINJ1-201ENST00000375446 CACNG7P62955 275 aa14.75□□□□□ -0.05
NINJ1-201ENST00000375446 LINC01556Q5JQF7 62 aa14.75□□□□□ -0.05
NINJ1-201ENST00000375446 TNFRSF18Q9Y5U5 241 aa14.75□□□□□ -0.05
NINJ1-201ENST00000375446 PKHD1P08F94 4074 aa14.75□□□□□ -0.05
NINJ1-201ENST00000375446 SMIM17P0DL12 118 aa14.74□□□□□ -0.05
NINJ1-201ENST00000375446 RPL36AP83881 106 aaKnown RBP14.74□□□□□ -0.05
NINJ1-201ENST00000375446 Q6ZRN7 208 aaPredicted RBP14.74□□□□□ -0.05
NINJ1-201ENST00000375446 C10orf126Q8N4M7 172 aa14.74□□□□□ -0.05
NINJ1-201ENST00000375446 RPL36ALQ969Q0 106 aaKnown RBP14.74□□□□□ -0.05
NINJ1-201ENST00000375446 RPP21Q9H633 154 aaKnown RBP14.74□□□□□ -0.05
NINJ1-201ENST00000375446 DYNC1H1Q14204 4646 aaKnown RBP14.73□□□□□ -0.05
NINJ1-201ENST00000375446 LYZL1Q6UWQ5 148 aa14.73□□□□□ -0.05
NINJ1-201ENST00000375446 NFE4Q86UQ8 179 aa14.73□□□□□ -0.05
NINJ1-201ENST00000375446 MSRB1Q9NZV6 116 aa14.73□□□□□ -0.05
NINJ1-201ENST00000375446 KIF25-AS1Q9Y6Z4 181 aa14.73□□□□□ -0.05
NINJ1-201ENST00000375446 A0A087WWC5 75 aa14.72□□□□□ -0.05
NINJ1-201ENST00000375446 F5H697 171 aa14.72□□□□□ -0.05
NINJ1-201ENST00000375446 SRP19P09132 144 aaKnown RBP14.72□□□□□ -0.05
NINJ1-201ENST00000375446 SMIM7Q9BQ49 75 aa14.72□□□□□ -0.05
NINJ1-201ENST00000375446 TRBV7-3A0A075B6L6 115 aa14.71□□□□□ -0.05
NINJ1-201ENST00000375446 OR10G8Q8NGN5 311 aa14.71□□□□□ -0.05
NINJ1-201ENST00000375446 CTRLP40313 264 aa14.7□□□□□ -0.06
NINJ1-201ENST00000375446 UBE2D3P61077 147 aa14.7□□□□□ -0.06
NINJ1-201ENST00000375446 UBE2D2P62837 147 aa14.7□□□□□ -0.06
NINJ1-201ENST00000375446 ZNF727A8MUV8 499 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 GATCO43716 136 aaKnown RBP14.69□□□□□ -0.06
NINJ1-201ENST00000375446 IGHV3-30P01768 117 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 IGHV3-33P01772 117 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 IGHV3-30-3P0DP02 117 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 IGHV3-30-5P0DP03 117 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 WDR73Q6P4I2 378 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 FAM231DQ6ZW35 169 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 NEXN-AS1Q8NBZ9 246 aa14.69□□□□□ -0.06
NINJ1-201ENST00000375446 MGPP08493 103 aa14.68□□□□□ -0.06
NINJ1-201ENST00000375446 NTF3P20783 257 aa14.68□□□□□ -0.06
NINJ1-201ENST00000375446 IBA57-AS1B1ANH7 110 aa14.67□□□□□ -0.06
NINJ1-201ENST00000375446 TRGC1P0CF51 173 aa14.67□□□□□ -0.06
NINJ1-201ENST00000375446 ERVFC1-1P60608 527 aa14.67□□□□□ -0.06
NINJ1-201ENST00000375446 LINC01551Q86U37 167 aa14.67□□□□□ -0.06
NINJ1-201ENST00000375446 CNFNQ9BYD5 112 aa14.67□□□□□ -0.06
NINJ1-201ENST00000375446 GTSF1Q8WW33 167 aa14.66□□□□□ -0.06
NINJ1-201ENST00000375446 TWIST1Q15672 202 aa14.65□□□□□ -0.06
NINJ1-201ENST00000375446 Q8N3U1 123 aa14.65□□□□□ -0.06
NINJ1-201ENST00000375446 A8MWL6 223 aa14.64□□□□□ -0.07
NINJ1-201ENST00000375446 C9JQL5 133 aa14.64□□□□□ -0.07
NINJ1-201ENST00000375446 CT83Q5H943 113 aa14.64□□□□□ -0.07
NINJ1-201ENST00000375446 SUMO4Q6EEV6 95 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms