RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 C8orf49Q96NF6 230 aa4.95□□□□□ -1.62
PTPN3-202ENST00000374541 ZNF747Q9BV97 191 aa4.95□□□□□ -1.62
PTPN3-202ENST00000374541 ASH1LQ9NR48 2969 aaKnown RBP4.95□□□□□ -1.62
PTPN3-202ENST00000374541 TRAV12-1A0A0B4J245 112 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 SPRY4Q9C004 299 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 H3BT86 120 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 FOXI2Q6ZQN5 318 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 MRPL55Q7Z7F7 128 aaKnown RBP4.94□□□□□ -1.62
PTPN3-202ENST00000374541 C8orf31Q8N9H6 132 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 C11orf45Q8TAV5 145 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 IGLC1P0CG04 106 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 OPRPNQ99935 248 aaPredicted RBP4.94□□□□□ -1.62
PTPN3-202ENST00000374541 TAX1BP3O14907 124 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 SS18L2Q9UHA2 77 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 ZNF106Q9H2Y7 1883 aaKnown RBP4.94□□□□□ -1.62
PTPN3-202ENST00000374541 ETDCA0A1B0GVM5 59 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.94□□□□□ -1.62
PTPN3-202ENST00000374541 ATP6V0E1O15342 81 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 HOXB4P17483 251 aaPredicted RBP4.94□□□□□ -1.62
PTPN3-202ENST00000374541 CXCL5P42830 114 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 IGFL4Q6B9Z1 124 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 SPATA3Q8NHX4 192 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 LINC00479Q96M42 142 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 ABCA12Q86UK0 2595 aa4.94□□□□□ -1.62
PTPN3-202ENST00000374541 DCHS2Q6V1P9 2916 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 WIPF3A6NGB9 483 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 SPINK13Q1W4C9 94 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 CENPVL3A0A0U1RRI6 287 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 SEC61GP60059 68 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 UBE2BP63146 152 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 CFHR3Q02985 330 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 ZFP2Q6ZN57 461 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 VSIG2Q96IQ7 327 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 IGHV7-4-1A0A0J9YVY3 117 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 FSHBP01225 129 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 SPART-AS1P0CW21 52 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 FOXE3Q13461 319 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 DYNAPQ8N1N2 210 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 IGKV1-16P04430 117 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 LINC01620Q4KN68 170 aa4.93□□□□□ -1.62
PTPN3-202ENST00000374541 ETV2O00321 342 aaPredicted RBP4.92□□□□□ -1.62
PTPN3-202ENST00000374541 NREPQ16612 68 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 Q9H8V8 135 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 Q9HAA7 133 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 ZFYVE26Q68DK2 2539 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 MED12Q93074 2177 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 SPTBN4Q9H254 2564 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 K7ERJ3 54 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 M0R2N4 97 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 KLK9Q9UKQ9 250 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 NAV2Q8IVL1 2488 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 OXLD1Q5BKU9 147 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 MED13LQ71F56 2210 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 SLURP1P55000 103 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 ZNF726P1Q15940 193 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 FXYD5Q96DB9 178 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 ZC2HC1AQ96GY0 325 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 CYYR1Q96J86 154 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 LRRK1Q38SD2 2015 aa4.92□□□□□ -1.62
PTPN3-202ENST00000374541 ANGP03950 147 aaKnown RBP4.92□□□□□ -1.62
PTPN3-202ENST00000374541 SPRY2O43597 315 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 PRR20EP86478 221 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 PRR20CP86479 221 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 PRR20DP86480 221 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 PRR20BP86481 221 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 PRR20AP86496 221 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 MRPL23Q16540 153 aaKnown RBP4.91□□□□□ -1.62
PTPN3-202ENST00000374541 DEFB135Q30KP9 77 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 TEX36Q5VZQ5 186 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 AMTNQ6UX39 209 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 MRPL36Q9P0J6 103 aaKnown RBP4.91□□□□□ -1.62
PTPN3-202ENST00000374541 HELZP42694 1942 aaKnown RBP4.91□□□□□ -1.62
PTPN3-202ENST00000374541 DSCAMO60469 2012 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 HEATR5BQ9P2D3 2071 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 PROP1O75360 226 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 PLXNB3Q9ULL4 1909 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 IGKV1-6A0A0C4DH72 117 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 FAM236AA0A1B0GUQ0 79 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 FAM236BA0A1B0GV22 79 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 G3V318 75 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 MUC22E2RYF6 1773 aaPredicted RBP4.91□□□□□ -1.62
PTPN3-202ENST00000374541 COL12A1Q99715 3063 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 COL4A2P08572 1712 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 MUSTN1Q8IVN3 82 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 LYPD6BQ8NI32 183 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 DKK2Q9UBU2 259 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 TMEM131Q92545 1883 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 CCL25O15444 150 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 ATP5EP2Q5VTU8 51 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 ADGRG4Q8IZF6 3080 aa4.91□□□□□ -1.62
PTPN3-202ENST00000374541 TRAV26-2A0A0B4J265 109 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 NHLRC4P0CG21 123 aaPredicted RBP4.9□□□□□ -1.62
PTPN3-202ENST00000374541 NOTCH3Q9UM47 2321 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 FAM110AQ9BQ89 295 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 YLPM1P49750 1951 aaKnown RBP4.9□□□□□ -1.62
PTPN3-202ENST00000374541 FREM1Q5H8C1 2179 aa4.9□□□□□ -1.62
PTPN3-202ENST00000374541 IGHV3-16A0A0C4DH30 117 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms