RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ZNF22P17026 224 aaPredicted RBP7.91□□□□□ -1.14
CD28-202ENST00000374481 RNF185Q96GF1 192 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 ZMAT4Q9H898 229 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 Q9H8V8 135 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 COL4A6Q14031 1691 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 ATP1A1-AS1Q5TC04 95 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 USP17L23D6RBM5 183 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 MDFICQ9P1T7 246 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 NOTCH4Q99466 2003 aa7.91□□□□□ -1.14
CD28-202ENST00000374481 LINC00311Q8N616 119 aa7.9□□□□□ -1.14
CD28-202ENST00000374481 I3L2K1 104 aa7.9□□□□□ -1.14
CD28-202ENST00000374481 KIAA1549LQ6ZVL6 1849 aa7.9□□□□□ -1.14
CD28-202ENST00000374481 A0A0J9YXY3 114 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 F6UB75 175 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 TMEM178BH3BS89 294 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 H7C423 109 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 IGLV2-11P01706 119 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 NSUN5P1Q3KNT7 163 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 LYPD2Q6UXB3 125 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 Q6ZS46 218 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 JPT2Q9H910 190 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 NACAE9PAV3 2078 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 GNRH2O43555 120 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 PRO3102Q9H379 93 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 C14orf132Q9NPU4 83 aa7.9□□□□□ -1.15
CD28-202ENST00000374481 NAV3Q8IVL0 2385 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 IGHV3-30-3P0DP02 117 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 CXCL5P42830 114 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 RPL36AP83881 106 aaKnown RBP7.89□□□□□ -1.15
CD28-202ENST00000374481 MPLKIPQ8TAP9 179 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 RPL36ALQ969Q0 106 aaKnown RBP7.89□□□□□ -1.15
CD28-202ENST00000374481 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 K7EIM0 57 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 GAS8-AS1O95177 125 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 MALP21145 153 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 Q9HAA7 133 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 ZNF71Q9NQZ8 489 aaPredicted RBP7.89□□□□□ -1.15
CD28-202ENST00000374481 ORMDL1Q9P0S3 153 aa7.89□□□□□ -1.15
CD28-202ENST00000374481 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 COX7A2LO14548 114 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 DNAH12Q6ZR08 3092 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 NBASA2RRP1 2371 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 PRSS33Q8NF86 280 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 VCANP13611 3396 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 EP300Q09472 2414 aaPredicted RBP7.88□□□□□ -1.15
CD28-202ENST00000374481 LST1O00453 97 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 GATA4P43694 442 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 MIAQ16674 131 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 MRPL55Q7Z7F7 128 aaKnown RBP7.88□□□□□ -1.15
CD28-202ENST00000374481 U3KQE9 123 aa7.88□□□□□ -1.15
CD28-202ENST00000374481 B9A039 149 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 LYNX1G3V0Z9 82 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 LYNX1P0DP58 116 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 RPL35AP18077 110 aaKnown RBP7.87□□□□□ -1.15
CD28-202ENST00000374481 SEC61GP60059 68 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 LINC01587Q99440 93 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 C2CD3Q4AC94 2353 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 H0YGX0 51 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 PRB1P04280 392 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 SUMO4Q6EEV6 95 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 C20orf173Q96LM9 149 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 ODF3Q96PU9 254 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 PRO0628Q9UI54 55 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 VSIG2Q96IQ7 327 aa7.87□□□□□ -1.15
CD28-202ENST00000374481 OPRPNQ99935 248 aaPredicted RBP7.87□□□□□ -1.15
CD28-202ENST00000374481 TMEM263Q8WUH6 116 aaKnown RBP7.86□□□□□ -1.15
CD28-202ENST00000374481 LENEPQ9Y5L5 61 aa7.86□□□□□ -1.15
CD28-202ENST00000374481 TMEM105Q8N8V8 129 aa7.86□□□□□ -1.15
CD28-202ENST00000374481 DNAH14Q0VDD8 3507 aa7.86□□□□□ -1.15
CD28-202ENST00000374481 NHLRC4P0CG21 123 aaPredicted RBP7.86□□□□□ -1.15
CD28-202ENST00000374481 C6orf226Q5I0X4 101 aa7.86□□□□□ -1.15
CD28-202ENST00000374481 C1orf229Q6ZS94 237 aaPredicted RBP7.86□□□□□ -1.15
CD28-202ENST00000374481 RNASE6Q93091 150 aaKnown RBP7.86□□□□□ -1.15
CD28-202ENST00000374481 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
CD28-202ENST00000374481 MBD3L2Q8NHZ7 208 aaPredicted RBP7.86□□□□□ -1.15
CD28-202ENST00000374481 RITA1Q96K30 269 aa7.86□□□□□ -1.15
CD28-202ENST00000374481 CDH23Q9H251 3354 aa7.85□□□□□ -1.15
CD28-202ENST00000374481 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
CD28-202ENST00000374481 LY6EQ16553 131 aa7.85□□□□□ -1.15
CD28-202ENST00000374481 TNRC6BQ9UPQ9 1833 aaKnown RBP7.85□□□□□ -1.15
CD28-202ENST00000374481 IGHV1-58A0A0C4DH39 117 aa7.85□□□□□ -1.15
CD28-202ENST00000374481 TRBV7-7A0A0K0K1E9 115 aa7.85□□□□□ -1.15
CD28-202ENST00000374481 ATG2AQ2TAZ0 1938 aa7.85□□□□□ -1.15
CD28-202ENST00000374481 LECT2O14960 151 aa7.84□□□□□ -1.15
CD28-202ENST00000374481 TMEM61Q8N0U2 210 aa7.84□□□□□ -1.15
CD28-202ENST00000374481 FANCD2OSQ96PS1 177 aa7.84□□□□□ -1.15
CD28-202ENST00000374481 FDCSPQ8NFU4 85 aa7.84□□□□□ -1.15
CD28-202ENST00000374481 MYO15AQ9UKN7 3530 aa7.84□□□□□ -1.15
CD28-202ENST00000374481 LOXP28300 417 aaPredicted RBP7.84□□□□□ -1.15
CD28-202ENST00000374481 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
CD28-202ENST00000374481 IGHV1OR15-1A0A075B7D0 117 aa7.84□□□□□ -1.16
CD28-202ENST00000374481 MRPL53Q96EL3 112 aaKnown RBP7.84□□□□□ -1.16
CD28-202ENST00000374481 IGLV2-23P01705 113 aa7.83□□□□□ -1.16
CD28-202ENST00000374481 IGHV1-69P01742 117 aa7.83□□□□□ -1.16
CD28-202ENST00000374481 NRACQ8N912 160 aa7.83□□□□□ -1.16
CD28-202ENST00000374481 ARHGAP32A7KAX9 2087 aa7.83□□□□□ -1.16
CD28-202ENST00000374481 IGHV3-38A0A0C4DH36 116 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms