RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 TRGV11A0A075B6L2 103 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 TRBV7-1A0A0A6YYK4 115 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 M0R381 172 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 PRB1P04280 392 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 SRSF1Q07955 248 aaKnown RBP eCLIP4.81□□□□□ -1.642e-6■■□□□ 11.7
CHD6-202ENST00000373222 AMMECR1LQ6DCA0 310 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 ORAOV1Q8WV07 137 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 CCL19Q99731 98 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 CNFNQ9BYD5 112 aa4.81□□□□□ -1.64
CHD6-202ENST00000373222 IGLV2-18A0A075B6J9 118 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 GNRH2O43555 120 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 PRR26Q8N8Z3 221 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 NRACQ8N912 160 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 C10orf105Q8TEF2 133 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 BAALCQ8WXS3 180 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 RPL39LQ96EH5 51 aaKnown RBP4.8□□□□□ -1.64
CHD6-202ENST00000373222 SLC50A1Q9BRV3 221 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 C7orf71A4D174 169 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 G3V4G9 280 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 HIST1H1AQ02539 215 aaPredicted RBP4.8□□□□□ -1.64
CHD6-202ENST00000373222 NEGR1Q7Z3B1 354 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 APRG1Q8IVJ8 170 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 DEFB125Q8N687 156 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 ZFAND2AQ8N6M9 145 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 MRAPQ8TCY5 172 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 MAP1LC3AQ9H492 121 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 JPT2Q9H910 190 aa4.8□□□□□ -1.64
CHD6-202ENST00000373222 CR1P17927 2039 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 CD5LO43866 347 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 RNASE4P34096 147 aaKnown RBP4.79□□□□□ -1.64
CHD6-202ENST00000373222 RPL13AP40429 203 aaKnown RBP4.79□□□□□ -1.64
CHD6-202ENST00000373222 RPS20P60866 119 aaKnown RBP4.79□□□□□ -1.64
CHD6-202ENST00000373222 KLK9Q2XQG4 91 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 LGALS9BQ3B8N2 356 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 SPANXN1Q5VSR9 72 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 LGALS9CQ6DKI2 356 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 C9orf47Q6ZRZ4 202 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 GTSCR1Q86UQ5 136 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 C14orf178Q8N769 122 aaPredicted RBP4.79□□□□□ -1.64
CHD6-202ENST00000373222 OR4X2Q8NGF9 303 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 OR2K2Q8NGT1 345 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 RAB37Q96AX2 223 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 FOXC2Q99958 501 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 TM2D2Q9BX73 214 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 MS4A6AQ9H2W1 248 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 KLK9Q9UKQ9 250 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 HHLA3Q9XRX5 114 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 V9GYY9 64 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 RBAKDNA6NC62 111 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 SOCS3O14543 225 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 IGKV3-20P01619 116 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 IGHV4-59P01825 116 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 PRSS1P07477 247 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 Q75L30 129 aa4.79□□□□□ -1.64
CHD6-202ENST00000373222 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 TMEM97Q5BJF2 176 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 LINC01561Q8N1V8 128 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 MRPL35Q9NZE8 188 aaKnown RBP4.78□□□□□ -1.64
CHD6-202ENST00000373222 A6NDX4 124 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 K7ERJ3 54 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 IGHG2P01859 326 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 FCER1GP30273 86 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 C12orf54Q6X4T0 127 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 ADAMTSL5Q6ZMM2 481 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 LINC00336Q6ZUF6 198 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 RHPN1-AS1Q9BWJ2 59 aa4.78□□□□□ -1.64
CHD6-202ENST00000373222 HELZ2Q9BYK8 2649 aaKnown RBP4.77□□□□□ -1.65
CHD6-202ENST00000373222 TRAV12-2A0A075B6T6 113 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 FAM223BA6NKX1 122 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 MSMBP08118 114 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 MGPP08493 103 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 FAM223AQ8IWN6 122 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 MAPKAPK5-AS1Q8N8E1 139 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 RASL10AQ92737 203 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 MEGF9Q9H1U4 602 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 RNASE3P12724 160 aaKnown RBP4.77□□□□□ -1.65
CHD6-202ENST00000373222 FXYD2P54710 66 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 C9orf139Q6ZV77 190 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 Q8N8P6 123 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 RETNQ9HD89 108 aa4.77□□□□□ -1.65
CHD6-202ENST00000373222 NBEAL2Q6ZNJ1 2754 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 VWFP04275 2813 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 GCN1Q92616 2671 aaKnown RBP4.76□□□□□ -1.65
CHD6-202ENST00000373222 H3BUT2 72 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 NDUFA4O00483 81 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 PPBPP02775 128 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 PRM2P04554 102 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 S100A4P26447 101 aaKnown RBP4.76□□□□□ -1.65
CHD6-202ENST00000373222 EMP1P54849 157 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 RBX1P62877 108 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 DEFB112Q30KQ8 113 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 TMEM190Q8WZ59 177 aa4.76□□□□□ -1.65
CHD6-202ENST00000373222 NXT2Q9NPJ8 142 aaKnown RBP4.76□□□□□ -1.65
CHD6-202ENST00000373222 TRBV7-9A0A0J9YWB2 115 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 LINC01546A6NGU7 62 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 IGLV1-40P01703 118 aa4.75□□□□□ -1.65
CHD6-202ENST00000373222 ZNF688P0C7X2 276 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms