RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
CSF3R-204ENST00000373104 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
CSF3R-204ENST00000373104 GAGE4Q13068 117 aa9.44□□□□□ -0.9
CSF3R-204ENST00000373104 SMIM20Q8N5G0 67 aa9.44□□□□□ -0.9
CSF3R-204ENST00000373104 EEF1AKMT3Q96AZ1 226 aa9.44□□□□□ -0.9
CSF3R-204ENST00000373104 SORL1Q92673 2214 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 IGIPA6NJ69 53 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 IFITM1P13164 125 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 CREBBPQ92793 2442 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 IGHV3-33P01772 117 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 SRD5A1P18405 259 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 GRNP28799 593 aaKnown RBP9.43□□□□□ -0.9
CSF3R-204ENST00000373104 PRR30Q53SZ7 412 aaPredicted RBP9.43□□□□□ -0.9
CSF3R-204ENST00000373104 MUSTN1Q8IVN3 82 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 ZFHX3Q15911 3703 aa9.43□□□□□ -0.9
CSF3R-204ENST00000373104 PRSS2P07478 247 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 DEFB123Q8N688 67 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 Q8N6K4 173 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 MUC4Q99102 2169 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 ADARB2-AS1A8MUL3 147 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 PPP1R17O96001 155 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
CSF3R-204ENST00000373104 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
CSF3R-204ENST00000373104 TRAV8-4A0A0B4J246 113 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 M0R1W7 72 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
CSF3R-204ENST00000373104 EIF4EBP3O60516 100 aaPredicted RBP9.41□□□□□ -0.9
CSF3R-204ENST00000373104 C9orf139Q6ZV77 190 aa9.41□□□□□ -0.9
CSF3R-204ENST00000373104 C15orf53Q8NAA6 179 aa9.41□□□□□ -0.9
CSF3R-204ENST00000373104 ZFHX2Q9C0A1 2572 aaPredicted RBP9.41□□□□□ -0.9
CSF3R-204ENST00000373104 HERV-K104P63124 156 aa9.41□□□□□ -0.9
CSF3R-204ENST00000373104 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
CSF3R-204ENST00000373104 FAM159AQ6UWV7 190 aa9.41□□□□□ -0.9
CSF3R-204ENST00000373104 IGHV1-69DA0A0B4J2H0 117 aa9.4□□□□□ -0.9
CSF3R-204ENST00000373104 CENPVL3A0A0U1RRI6 287 aa9.4□□□□□ -0.9
CSF3R-204ENST00000373104 VCYO14598 125 aa9.4□□□□□ -0.9
CSF3R-204ENST00000373104 ATXN8Q156A1 80 aa9.4□□□□□ -0.9
CSF3R-204ENST00000373104 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
CSF3R-204ENST00000373104 UNQ9165/PRO28630Q6UXU0 137 aa9.4□□□□□ -0.9
CSF3R-204ENST00000373104 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
CSF3R-204ENST00000373104 NPC2P61916 151 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 SHISA2Q6UWI4 295 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 PIP4P1Q86T03 277 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 TMEM219Q86XT9 240 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 C3orf56Q8N813 242 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 TMEM263Q8WUH6 116 aaKnown RBP9.39□□□□□ -0.91
CSF3R-204ENST00000373104 AMELXQ99217 191 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 TRBV7-9A0A0J9YWB2 115 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 COL12A1Q99715 3063 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 TRBV7-1A0A0A6YYK4 115 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 LENEPQ9Y5L5 61 aa9.39□□□□□ -0.91
CSF3R-204ENST00000373104 TRBV12-3P01733 135 aa9.38□□□□□ -0.91
CSF3R-204ENST00000373104 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
CSF3R-204ENST00000373104 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
CSF3R-204ENST00000373104 EBI3Q14213 229 aa9.38□□□□□ -0.91
CSF3R-204ENST00000373104 C2orf82Q6UX34 121 aa9.38□□□□□ -0.91
CSF3R-204ENST00000373104 CELSR1Q9NYQ6 3014 aa9.38□□□□□ -0.91
CSF3R-204ENST00000373104 ITLN2Q8WWU7 325 aaPredicted RBP9.38□□□□□ -0.91
CSF3R-204ENST00000373104 TIMM17AQ99595 171 aa9.38□□□□□ -0.91
CSF3R-204ENST00000373104 SPXQ9BT56 116 aa9.38□□□□□ -0.91
CSF3R-204ENST00000373104 H3BMM0 161 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 IGHV3-11P01762 117 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 ZNF56Q15929 161 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 ODF3Q96PU9 254 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.37□□□□□ -0.911e-9■■■□□ 14.6
CSF3R-204ENST00000373104 OVOL1O14753 267 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 TRIAP1O43715 76 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 LINC00315P59091 139 aa9.37□□□□□ -0.91
CSF3R-204ENST00000373104 RPL32P62910 135 aaKnown RBP9.37□□□□□ -0.91
CSF3R-204ENST00000373104 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 MINOS1Q5TGZ0 78 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 MINOS1-NBL1R4GNA1 71 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 U3KQE9 123 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 SAA4P35542 130 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 Q8NA96 180 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.36□□□□□ -0.91
CSF3R-204ENST00000373104 OOSP1A8MZH6 123 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 IGKV3-20P01619 116 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 Q6ZSV7 163 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 DUX3Q96PT4 197 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
CSF3R-204ENST00000373104 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 IGHV3OR16-10A0A075B7F0 116 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 LEPROTO15243 131 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 MEIG1Q5JSS6 88 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 IGHV4OR15-8A0A075B7B6 117 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 A0A087WW49 117 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 TRBV10-2A0A0K0K1G8 114 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 P0DMU3 169 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 FAM231AP0DMU4 169 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 FAM231CP0DMU5 169 aa9.35□□□□□ -0.91
CSF3R-204ENST00000373104 PRRC2AP48634 2157 aaKnown RBP9.35□□□□□ -0.91
CSF3R-204ENST00000373104 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms