RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 FABP9Q0Z7S8 132 aa11.48□□□□□ -0.57
TMEM53-203ENST00000372242 IGHV3-73A0A0B4J1V6 119 aa11.47□□□□□ -0.57
TMEM53-203ENST00000372242 A0A1W2PPQ1 181 aa11.47□□□□□ -0.57
TMEM53-203ENST00000372242 CT83Q5H943 113 aa11.47□□□□□ -0.57
TMEM53-203ENST00000372242 SAMD10Q9BYL1 202 aa11.47□□□□□ -0.57
TMEM53-203ENST00000372242 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
TMEM53-203ENST00000372242 NACAE9PAV3 2078 aa11.47□□□□□ -0.57
TMEM53-203ENST00000372242 RS1O15537 224 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 NXPH4O95158 308 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 FHL2Q14192 279 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 ELOBQ15370 118 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 PIK3CD-AS1Q5SR53 167 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 NDUFAF3Q9BU61 184 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.57
TMEM53-203ENST00000372242 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.58
TMEM53-203ENST00000372242 TRGV4A0A0C4DH28 118 aa11.46□□□□□ -0.58
TMEM53-203ENST00000372242 A0A0J9YY99 117 aa11.46□□□□□ -0.58
TMEM53-203ENST00000372242 F2Z2F3 143 aa11.46□□□□□ -0.58
TMEM53-203ENST00000372242 CTRLP40313 264 aa11.46□□□□□ -0.58
TMEM53-203ENST00000372242 PGLYRP4Q96LB8 373 aa11.46□□□□□ -0.58
TMEM53-203ENST00000372242 STARD9Q9P2P6 4700 aa11.45□□□□□ -0.58
TMEM53-203ENST00000372242 TRAV26-1A0A087WT03 109 aa11.45□□□□□ -0.58
TMEM53-203ENST00000372242 A0A087WWL8 130 aa11.45□□□□□ -0.58
TMEM53-203ENST00000372242 A8MWV9 139 aa11.45□□□□□ -0.58
TMEM53-203ENST00000372242 CTDSP1Q9GZU7 261 aa11.45□□□□□ -0.58
TMEM53-203ENST00000372242 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
TMEM53-203ENST00000372242 NTF3P20783 257 aa11.44□□□□□ -0.58
TMEM53-203ENST00000372242 FAM74A4Q5TZK3 123 aa11.44□□□□□ -0.58
TMEM53-203ENST00000372242 HHLA3Q9XRX5 114 aa11.44□□□□□ -0.58
TMEM53-203ENST00000372242 CRYGDP07320 174 aa11.43□□□□□ -0.58
TMEM53-203ENST00000372242 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
TMEM53-203ENST00000372242 CACNG7P62955 275 aa11.43□□□□□ -0.58
TMEM53-203ENST00000372242 VSIG2Q96IQ7 327 aa11.43□□□□□ -0.58
TMEM53-203ENST00000372242 GFRA4Q9GZZ7 299 aa11.43□□□□□ -0.58
TMEM53-203ENST00000372242 UFSP1Q6NVU6 142 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
TMEM53-203ENST00000372242 PRO0255Q9UI72 69 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 FAM231BA6NCW3 169 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
TMEM53-203ENST00000372242 CRYBA4P53673 196 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 TWIST1Q15672 202 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 Q6ZSN1 163 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 NUP35Q8NFH5 326 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 FAM210BQ96KR6 192 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 CNFNQ9BYD5 112 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 APLNQ9ULZ1 77 aa11.42□□□□□ -0.58
TMEM53-203ENST00000372242 TRBV24-1A0A075B6N3 115 aa11.41□□□□□ -0.58
TMEM53-203ENST00000372242 SMIM27A0A1W2PRY6 76 aa11.41□□□□□ -0.58
TMEM53-203ENST00000372242 PAX4O43316 350 aa11.41□□□□□ -0.58
TMEM53-203ENST00000372242 GATA1P15976 413 aaPredicted RBP11.41□□□□□ -0.58
TMEM53-203ENST00000372242 ZFP2Q6ZN57 461 aa11.41□□□□□ -0.58
TMEM53-203ENST00000372242 AP1S3Q96PC3 154 aa11.41□□□□□ -0.58
TMEM53-203ENST00000372242 TGIF2-C20orf24A0A0A6YYL0 155 aa11.4□□□□□ -0.58
TMEM53-203ENST00000372242 PPP1R2P9O14990 202 aa11.4□□□□□ -0.58
TMEM53-203ENST00000372242 NUDT3O95989 172 aa11.4□□□□□ -0.58
TMEM53-203ENST00000372242 WDR73Q6P4I2 378 aa11.4□□□□□ -0.58
TMEM53-203ENST00000372242 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
TMEM53-203ENST00000372242 NAT8BQ9UHF3 227 aa11.4□□□□□ -0.58
TMEM53-203ENST00000372242 EVI2AP22794 236 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 SLAQ13239 276 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 ANAPC16Q96DE5 110 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 A0A1B0GUT8 65 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 RHODO00212 210 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 CIDEAO60543 219 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 BORCS7Q96B45 105 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 KIF25-AS1Q9Y6Z4 181 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
TMEM53-203ENST00000372242 DYNC2H1Q8NCM8 4307 aaKnown RBP11.38□□□□□ -0.59
TMEM53-203ENST00000372242 LOC100131303A0A0U1RQF7 123 aa11.38□□□□□ -0.59
TMEM53-203ENST00000372242 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
TMEM53-203ENST00000372242 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 FAM3BP58499 235 aaPredicted RBP11.37□□□□□ -0.59
TMEM53-203ENST00000372242 ZNF56Q15929 161 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 Q9UF83 564 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 TRBV6-4A0A1B0GX49 114 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 H3BNG1 76 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 TCTAP57738 103 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 LINC00315P59091 139 aa11.37□□□□□ -0.59
TMEM53-203ENST00000372242 F5H697 171 aa11.36□□□□□ -0.59
TMEM53-203ENST00000372242 MGPP08493 103 aa11.36□□□□□ -0.59
TMEM53-203ENST00000372242 GYPEP15421 78 aa11.36□□□□□ -0.59
TMEM53-203ENST00000372242 S100A2P29034 98 aa11.36□□□□□ -0.59
TMEM53-203ENST00000372242 A0A096LPF7 62 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 PHOX2AO14813 284 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 P0DMU3 169 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 PLECQ15149 4684 aaKnown RBP11.35□□□□□ -0.59
TMEM53-203ENST00000372242 K7EQD1 137 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BKO60814 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BJP06899 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BOP23527 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BBP33778 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BDP58876 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST1H2BCP62807 126 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 RHOHQ15669 191 aa11.35□□□□□ -0.59
TMEM53-203ENST00000372242 HIST2H2BEQ16778 126 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms