RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 S4R3C0 116 aa8.68□□□□□ -1.02
TSPAN1-201ENST00000372003 H3BMG7 143 aa8.67□□□□□ -1.02
TSPAN1-201ENST00000372003 M0R381 172 aa8.67□□□□□ -1.02
TSPAN1-201ENST00000372003 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
TSPAN1-201ENST00000372003 GATA1P15976 413 aaPredicted RBP8.67□□□□□ -1.02
TSPAN1-201ENST00000372003 HLA-DMBP28068 263 aa8.67□□□□□ -1.02
TSPAN1-201ENST00000372003 ERCC8Q13216 396 aa8.67□□□□□ -1.02
TSPAN1-201ENST00000372003 AGPAT4-IT1Q9H0P7 198 aa8.67□□□□□ -1.02
TSPAN1-201ENST00000372003 NDPQ00604 133 aa8.66□□□□□ -1.02
TSPAN1-201ENST00000372003 SMAGPQ0VAQ4 97 aa8.66□□□□□ -1.02
TSPAN1-201ENST00000372003 PAPPA-AS1Q5QFB9 102 aa8.66□□□□□ -1.02
TSPAN1-201ENST00000372003 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
TSPAN1-201ENST00000372003 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
TSPAN1-201ENST00000372003 LINC01548A6NM66 108 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 TRGV3P03979 118 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 ETDBQ3ZM63 59 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 DLX4Q92988 240 aaPredicted RBP8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 MDFIQ99750 246 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 SELENOKQ9Y6D0 94 aa8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 FBN1P35555 2871 aaKnown RBP8.65□□□□□ -1.02
TSPAN1-201ENST00000372003 IGHV7-81A0A0B4J1V7 117 aa8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 NDUFA7O95182 113 aa8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 RPL32P62910 135 aaKnown RBP8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 LINC00527Q9UJ94 153 aa8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 U3KQE9 123 aa8.65□□□□□ -1.03
TSPAN1-201ENST00000372003 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 LGALS1P09382 135 aaKnown RBP8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 PRB4P10163 310 aaPredicted RBP8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 UBE2D1P51668 147 aa8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 CFAP126Q5VTH2 177 aa8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 IGFL4Q6B9Z1 124 aa8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 MORN3Q6PF18 240 aaPredicted RBP8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 C16orf95Q9H693 158 aa8.64□□□□□ -1.03
TSPAN1-201ENST00000372003 TRBV7-1A0A0A6YYK4 115 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 TRAV8-2A0A0B4J237 113 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 CLPSL1A2RUU4 121 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 APOMO95445 188 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 PPIFP30405 207 aaKnown RBP8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 FOXI1Q12951 378 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 SH2D6Q7Z4S9 175 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 Q8N2B8 174 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 METTL26Q96S19 204 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 CYSLTR1Q9Y271 337 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 UFC1Q9Y3C8 167 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 C2CD3Q4AC94 2353 aa8.63□□□□□ -1.03
TSPAN1-201ENST00000372003 TRBV20-1A0A075B6N2 111 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 IGHV3-23P01764 117 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 IGHG2P01859 326 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 CLEC3BP05452 202 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 EEF1AKMT3Q96AZ1 226 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 LINC00477Q96M19 166 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 MRPL16Q9NX20 251 aaKnown RBP8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 TRBV7-9A0A0J9YWB2 115 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 CKS1BP61024 79 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 UBE2D3P61077 147 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 HERVK_113P61574 105 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 UBE2D2P62837 147 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 C8orf86Q6ZUL3 223 aa8.62□□□□□ -1.03
TSPAN1-201ENST00000372003 ATRQ13535 2644 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 TRAV21A0A0B4J279 112 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 M0QXV9 152 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 ATP6V0E1O15342 81 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 AMTNQ6UX39 209 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 SBSPONQ8IVN8 264 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 RNF182Q8N6D2 247 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 BAALCQ8WXS3 180 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 PRADC1Q9BSG0 188 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
TSPAN1-201ENST00000372003 TRAV26-2A0A0B4J265 109 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 OVOL1O14753 267 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 PROK1P58294 105 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 ECSCRQ19T08 205 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 HIST2H2BDQ6DRA6 164 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 C10orf99Q6UWK7 81 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 C11orf44Q8N8P7 122 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 PPDPFLQ8WWR9 84 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 RASL10AQ92737 203 aa8.6□□□□□ -1.03
TSPAN1-201ENST00000372003 ZNF815PA8K554 130 aa8.59□□□□□ -1.03
TSPAN1-201ENST00000372003 G3V318 75 aa8.59□□□□□ -1.03
TSPAN1-201ENST00000372003 ASIPP42127 132 aa8.59□□□□□ -1.03
TSPAN1-201ENST00000372003 CRYBA4P53673 196 aa8.59□□□□□ -1.03
TSPAN1-201ENST00000372003 C3orf56Q8N813 242 aa8.59□□□□□ -1.03
TSPAN1-201ENST00000372003 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
TSPAN1-201ENST00000372003 TRAV41A0A0B4J266 112 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 PRSS29PA6NIE9 313 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 H3BVH4 76 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 CD7P09564 240 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 KRTAP10-3P60369 221 aa8.58□□□□□ -1.04
TSPAN1-201ENST00000372003 APRG1Q8IVJ8 170 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms