RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SCGB2A1O75556 95 aa11.14□□□□□ -0.63
LMO4-201ENST00000370542 FCER1GP30273 86 aa11.14□□□□□ -0.63
LMO4-201ENST00000370542 LYZP61626 148 aa11.14□□□□□ -0.63
LMO4-201ENST00000370542 RPL24P83731 157 aaKnown RBP11.14□□□□□ -0.63
LMO4-201ENST00000370542 SGK494Q96LW2 274 aa11.14□□□□□ -0.63
LMO4-201ENST00000370542 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
LMO4-201ENST00000370542 MRPL36Q9P0J6 103 aaKnown RBP11.14□□□□□ -0.63
LMO4-201ENST00000370542 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
LMO4-201ENST00000370542 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 TEX22C9J3V5 150 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 APELAP0DMC3 54 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 CKS2P33552 79 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 NMUP48645 174 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 TWIST1Q15672 202 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 SIGLEC15Q6ZMC9 328 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 PEMTQ9UBM1 199 aa11.13□□□□□ -0.63
LMO4-201ENST00000370542 NPIPB5A8MRT5 1133 aa11.12□□□□□ -0.63
LMO4-201ENST00000370542 E7EUB6 86 aa11.12□□□□□ -0.63
LMO4-201ENST00000370542 E9PLD3 99 aa11.12□□□□□ -0.63
LMO4-201ENST00000370542 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
LMO4-201ENST00000370542 MRPL51Q4U2R6 128 aaKnown RBP11.12□□□□□ -0.63
LMO4-201ENST00000370542 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
LMO4-201ENST00000370542 CEND1Q8N111 149 aa11.12□□□□□ -0.63
LMO4-201ENST00000370542 CHAC1Q9BUX1 264 aa11.12□□□□□ -0.63
LMO4-201ENST00000370542 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
LMO4-201ENST00000370542 GAGE12HA6NDE8 117 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
LMO4-201ENST00000370542 SNAI2O43623 268 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 DPM2O94777 84 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 IGKCP01834 107 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
LMO4-201ENST00000370542 AZU1P20160 251 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 ATP6V0E2Q8NHE4 81 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 RAB37Q96AX2 223 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 FANCD2OSQ96PS1 177 aa11.11□□□□□ -0.63
LMO4-201ENST00000370542 TMEM238LA0A1B0GVL6 79 aa11.1□□□□□ -0.63
LMO4-201ENST00000370542 LGALS9O00182 355 aa11.1□□□□□ -0.63
LMO4-201ENST00000370542 GCSHP23434 173 aa11.1□□□□□ -0.63
LMO4-201ENST00000370542 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
LMO4-201ENST00000370542 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
LMO4-201ENST00000370542 EXOC3-AS1Q8N2X6 119 aa11.1□□□□□ -0.63
LMO4-201ENST00000370542 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 PRSS47A8MTI9 375 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 I3L2K1 104 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 DEFB114Q30KQ6 69 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 LYRM7Q5U5X0 104 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 GTSCR1Q86UQ5 136 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
LMO4-201ENST00000370542 CNFNQ9BYD5 112 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
LMO4-201ENST00000370542 FRAS1Q86XX4 4008 aa11.08□□□□□ -0.64
LMO4-201ENST00000370542 SH2D1AO60880 128 aa11.08□□□□□ -0.64
LMO4-201ENST00000370542 ODF1Q14990 250 aa11.08□□□□□ -0.64
LMO4-201ENST00000370542 AMN1Q8IY45 258 aa11.08□□□□□ -0.64
LMO4-201ENST00000370542 CCDC140Q96MF4 163 aa11.08□□□□□ -0.64
LMO4-201ENST00000370542 SPANXB1Q9NS25 103 aaPredicted RBP11.08□□□□□ -0.64
LMO4-201ENST00000370542 IGLL5B9A064 214 aa11.07□□□□□ -0.64
LMO4-201ENST00000370542 GNG7O60262 68 aa11.07□□□□□ -0.64
LMO4-201ENST00000370542 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
LMO4-201ENST00000370542 CRIP1P50238 77 aa11.07□□□□□ -0.64
LMO4-201ENST00000370542 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
LMO4-201ENST00000370542 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
LMO4-201ENST00000370542 IGLV11-55A0A075B6I3 123 aa11.06□□□□□ -0.64
LMO4-201ENST00000370542 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
LMO4-201ENST00000370542 IGHV3-48P01763 117 aa11.06□□□□□ -0.64
LMO4-201ENST00000370542 RPL7P18124 248 aaKnown RBP11.06□□□□□ -0.64
LMO4-201ENST00000370542 PLNP26678 52 aa11.06□□□□□ -0.64
LMO4-201ENST00000370542 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
LMO4-201ENST00000370542 Q8N8P6 123 aa11.06□□□□□ -0.64
LMO4-201ENST00000370542 RNF125Q96EQ8 232 aa11.06□□□□□ -0.64
LMO4-201ENST00000370542 MRAP2Q96G30 205 aa11.06□□□□□ -0.64
LMO4-201ENST00000370542 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 NPYP01303 97 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 PRSS1P07477 247 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 CD7P09564 240 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 EDN2P20800 178 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 FCGR2BP31994 310 aaPredicted RBP11.05□□□□□ -0.64
LMO4-201ENST00000370542 FXYD2P54710 66 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 TPPP3Q9BW30 176 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 HHLA3Q9XRX5 114 aa11.05□□□□□ -0.64
LMO4-201ENST00000370542 TMEM213A2RRL7 107 aa11.04□□□□□ -0.64
LMO4-201ENST00000370542 A6NJY4 79 aa11.04□□□□□ -0.64
LMO4-201ENST00000370542 H3BTX0 84 aa11.04□□□□□ -0.64
LMO4-201ENST00000370542 K7EMI3 77 aa11.04□□□□□ -0.64
LMO4-201ENST00000370542 IGKV1-17P01599 117 aa11.04□□□□□ -0.64
LMO4-201ENST00000370542 LEPP41159 167 aa11.04□□□□□ -0.64
LMO4-201ENST00000370542 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
LMO4-201ENST00000370542 TRBV7-1A0A0A6YYK4 115 aa11.03□□□□□ -0.64
LMO4-201ENST00000370542 TRAV12-1A0A0B4J245 112 aa11.03□□□□□ -0.64
LMO4-201ENST00000370542 RRN3P1Q2M238 152 aa11.03□□□□□ -0.64
LMO4-201ENST00000370542 C12orf74Q32Q52 190 aa11.03□□□□□ -0.64
LMO4-201ENST00000370542 FAM106AQ4KMX7 169 aa11.03□□□□□ -0.64
LMO4-201ENST00000370542 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
LMO4-201ENST00000370542 EEF1AKMT3Q96AZ1 226 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms