RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 A8MZ25 164 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 INSP01308 110 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 CD7P09564 240 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 GZMBP10144 247 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 NTF3P20783 257 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 SLAQ13239 276 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 GTSCR1Q86UQ5 136 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 STHQ8IWL8 128 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 KIR2DL5AQ8N109 375 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 KIR2DL5BQ8NHK3 375 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 ALKBH7Q9BT30 221 aaPredicted RBP6.38□□□□□ -1.39
SNX27-201ENST00000368838 KNCNA6PVL3 124 aa6.37□□□□□ -1.39
SNX27-201ENST00000368838 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
SNX27-201ENST00000368838 GYPEP15421 78 aa6.37□□□□□ -1.39
SNX27-201ENST00000368838 CAMPP49913 170 aa6.37□□□□□ -1.39
SNX27-201ENST00000368838 SPINK13Q1W4C9 94 aa6.37□□□□□ -1.39
SNX27-201ENST00000368838 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
SNX27-201ENST00000368838 GSN-AS1Q9NRJ2 163 aa6.37□□□□□ -1.39
SNX27-201ENST00000368838 TRAV12-3A0A0B4J271 114 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 M0R2Z0 102 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 M0R381 172 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 PPP1R17O96001 155 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 S100A4P26447 101 aaKnown RBP6.36□□□□□ -1.39
SNX27-201ENST00000368838 PTTG1IPP53801 180 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 ZNF705AQ6ZN79 300 aaPredicted RBP6.36□□□□□ -1.39
SNX27-201ENST00000368838 SMIM15Q7Z3B0 74 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 CSNK1G2-AS1Q8NCQ2 148 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 OR10AG1Q8NH19 301 aa6.36□□□□□ -1.39
SNX27-201ENST00000368838 TMSB15BA0A087X1C1 80 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 GRIFINA4D1Z8 144 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 LINC01546A6NGU7 62 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 K7EMI3 77 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 CIDEAO60543 219 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 SPINK4O60575 86 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
SNX27-201ENST00000368838 RBMY1A1P0DJD3 496 aaKnown RBP6.35□□□□□ -1.39
SNX27-201ENST00000368838 RBMY1CP0DJD4 496 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 RAB4AP20338 218 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 SNRPEP62304 92 aaKnown RBP6.35□□□□□ -1.39
SNX27-201ENST00000368838 RPL32P62910 135 aaKnown RBP6.35□□□□□ -1.39
SNX27-201ENST00000368838 RBMY1FQ15415 496 aaKnown RBP6.35□□□□□ -1.39
SNX27-201ENST00000368838 TWIST1Q15672 202 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 ORMDL3Q8N138 153 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 HIST3H2BBQ8N257 126 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 SYT8Q8NBV8 401 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 IL17DQ8TAD2 202 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 MRAP2Q96G30 205 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 PHLDA3Q9Y5J5 127 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 KIF25-AS1Q9Y6Z4 181 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 AGRNO00468 2067 aa6.35□□□□□ -1.39
SNX27-201ENST00000368838 SMIM9A6NGZ8 99 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 GNRH2O43555 120 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 PMCHP20382 165 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 LINC00315P59091 139 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 RAB4BP61018 213 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 DAZ2Q13117 558 aaKnown RBP6.34□□□□□ -1.39
SNX27-201ENST00000368838 LGALS9BQ3B8N2 356 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 SPANXN1Q5VSR9 72 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 Q6ZQT7 251 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 C1orf158Q8N1D5 194 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 C11orf72Q8NBR9 251 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 RASL10AQ92737 203 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 CHCHD1Q96BP2 118 aaKnown RBP6.34□□□□□ -1.39
SNX27-201ENST00000368838 C18orf15Q96N68 181 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 AP1S3Q96PC3 154 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 DPH3P1Q9H4G8 78 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 NAGKQ9UJ70 344 aa6.34□□□□□ -1.39
SNX27-201ENST00000368838 TRAV12-2A0A075B6T6 113 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 H3BVH4 76 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 M0R2P5 195 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 PRB4P10163 310 aaPredicted RBP6.33□□□□□ -1.4
SNX27-201ENST00000368838 SRIP30626 198 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 ZNF415Q09FC8 603 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 ZNF124Q15973 351 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 MUC21Q5SSG8 566 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 TMEM263Q8WUH6 116 aaKnown RBP6.33□□□□□ -1.4
SNX27-201ENST00000368838 CSTL1Q9H114 145 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 GOLT1BQ9Y3E0 138 aa6.33□□□□□ -1.4
SNX27-201ENST00000368838 A8MWV9 139 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 IGKV3-20P01619 116 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 EVI2AP22794 236 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 NDUFA6P56556 154 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 LINC00310P59036 64 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 MRPL51Q4U2R6 128 aaKnown RBP6.32□□□□□ -1.4
SNX27-201ENST00000368838 ZFP2Q6ZN57 461 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 AMN1Q8IY45 258 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 RNASE8Q8TDE3 154 aaKnown RBP6.32□□□□□ -1.4
SNX27-201ENST00000368838 C20orf78Q9BR46 151 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 OVOL2Q9BRP0 275 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 MSRB1Q9NZV6 116 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
SNX27-201ENST00000368838 TRBV6-5A0A0K0K1A5 114 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 CBY3A6NI87 242 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 RHODO00212 210 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 CKS2P33552 79 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 APOC4P55056 127 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 Q6ZWC4 215 aa6.31□□□□□ -1.4
SNX27-201ENST00000368838 TMEM18Q96B42 140 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms