RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ATXN8Q156A1 80 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 AMTNQ6UX39 209 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 DEFB105AQ8NG35 78 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 NDUFA11Q86Y39 141 aa8.9□□□□□ -0.99
SYNE1-204ENST00000367248 IGHG4P01861 327 aa8.9□□□□□ -0.99
SYNE1-204ENST00000367248 SPINK8P0C7L1 97 aa8.9□□□□□ -0.99
SYNE1-204ENST00000367248 TTC32Q5I0X7 151 aa8.9□□□□□ -0.99
SYNE1-204ENST00000367248 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.9□□□□□ -0.99
SYNE1-204ENST00000367248 Q6YL49 198 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 CENPFP49454 3210 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 TRAV8-2A0A0B4J237 113 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 TEX48A0A1B0GUV7 120 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 M0R2N4 97 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 TAL2Q16559 108 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 A0A087X0K7 114 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 IGF1P05019 195 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 TMEM131Q92545 1883 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 LRCOL1A6NCL2 159 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 INSL3P51460 131 aa8.89□□□□□ -0.99
SYNE1-204ENST00000367248 SAMD5Q5TGI4 173 aa8.88□□□□□ -0.99
SYNE1-204ENST00000367248 HHLA3Q9XRX5 114 aa8.88□□□□□ -0.99
SYNE1-204ENST00000367248 Q6ZSV7 163 aa8.88□□□□□ -0.99
SYNE1-204ENST00000367248 CCDC140Q96MF4 163 aa8.88□□□□□ -0.99
SYNE1-204ENST00000367248 TIMM17AQ99595 171 aa8.88□□□□□ -0.99
SYNE1-204ENST00000367248 EBI3Q14213 229 aa8.88□□□□□ -0.99
SYNE1-204ENST00000367248 MRPL35Q9NZE8 188 aaKnown RBP8.88□□□□□ -0.99
SYNE1-204ENST00000367248 TRAV8-3A0A0A6YYJ7 113 aa8.87□□□□□ -0.99
SYNE1-204ENST00000367248 C15orf53Q8NAA6 179 aa8.87□□□□□ -0.99
SYNE1-204ENST00000367248 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
SYNE1-204ENST00000367248 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
SYNE1-204ENST00000367248 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
SYNE1-204ENST00000367248 NDUFA12Q9UI09 145 aa8.87□□□□□ -0.99
SYNE1-204ENST00000367248 C1orf229Q6ZS94 237 aaPredicted RBP8.87□□□□□ -0.99
SYNE1-204ENST00000367248 PLXNB3Q9ULL4 1909 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 F8VRH5 84 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 SCRT2Q9NQ03 307 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 LGALS9BQ3B8N2 356 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 LGALS9CQ6DKI2 356 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 MSRB1Q9NZV6 116 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 LY6G6CO95867 125 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 C11orf1Q9H5F2 150 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 OXLD1Q5BKU9 147 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 SPTBN4Q9H254 2564 aa8.86□□□□□ -0.99
SYNE1-204ENST00000367248 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 TIRAPP58753 221 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 HERVK_113P63121 156 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 ZNF664Q8N3J9 261 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 KLF12Q9Y4X4 402 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 ANKRD11Q6UB99 2663 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-204ENST00000367248 GATA1P15976 413 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-204ENST00000367248 NCOA6Q14686 2063 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-204ENST00000367248 FASNP49327 2511 aaKnown RBP8.85□□□□□ -0.99
SYNE1-204ENST00000367248 A0A0J9YX75 114 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 IGLC2P0DOY2 106 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 IL17DQ8TAD2 202 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 C20orf144Q9BQM9 153 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 ZNF124Q15973 351 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 Q8N1Y9 231 aa8.85□□□□□ -0.99
SYNE1-204ENST00000367248 K7EQD1 137 aa8.84□□□□□ -0.99
SYNE1-204ENST00000367248 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
SYNE1-204ENST00000367248 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
SYNE1-204ENST00000367248 K7EMI3 77 aa8.84□□□□□ -0.99
SYNE1-204ENST00000367248 Q6ZWC4 215 aa8.84□□□□□ -0.99
SYNE1-204ENST00000367248 LY6LH3BQJ8 138 aa8.84□□□□□ -1
SYNE1-204ENST00000367248 LRRK2Q5S007 2527 aa8.83□□□□□ -1
SYNE1-204ENST00000367248 POLR3KQ9Y2Y1 108 aaPredicted RBP8.83□□□□□ -1
SYNE1-204ENST00000367248 KIR3DS1Q14943 382 aa8.83□□□□□ -1
SYNE1-204ENST00000367248 MED12LQ86YW9 2145 aa8.83□□□□□ -1
SYNE1-204ENST00000367248 TRAV26-1A0A087WT03 109 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 BBC3Q96PG8 261 aaPredicted RBP8.82□□□□□ -1
SYNE1-204ENST00000367248 HILS1P60008 231 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 DNAJC30Q96LL9 226 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 MAP6D1Q9H9H5 199 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 SH2D6Q7Z4S9 175 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 VSIG2Q96IQ7 327 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 DEFB131BA0A096LNP1 70 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 RPL39LQ96EH5 51 aaKnown RBP8.82□□□□□ -1
SYNE1-204ENST00000367248 OVOL2Q9BRP0 275 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 J3QQQ9 107 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 ZNF747Q9BV97 191 aa8.82□□□□□ -1
SYNE1-204ENST00000367248 CEP192Q8TEP8 1941 aa8.81□□□□□ -1
SYNE1-204ENST00000367248 SPANXA1Q9NS26 97 aa8.81□□□□□ -1
SYNE1-204ENST00000367248 USP9XQ93008 2570 aaPredicted RBP8.81□□□□□ -1
SYNE1-204ENST00000367248 CRYGBP07316 175 aa8.81□□□□□ -1
SYNE1-204ENST00000367248 LINC01006Q8NI28 216 aa8.81□□□□□ -1
SYNE1-204ENST00000367248 EIF4EBP1Q13541 118 aaPredicted RBP8.81□□□□□ -1
SYNE1-204ENST00000367248 GTSF1Q8WW33 167 aa8.81□□□□□ -1
SYNE1-204ENST00000367248 SPATA25Q9BR10 227 aa8.81□□□□□ -1
SYNE1-204ENST00000367248 C18orf65Q6ZTR6 163 aa8.81□□□□□ -1
SYNE1-204ENST00000367248 BOD1L2Q8IYS8 172 aa8.8□□□□□ -1
SYNE1-204ENST00000367248 TRBV6-1A0A0K0K1D8 114 aa8.8□□□□□ -1
SYNE1-204ENST00000367248 IGLC3P0DOY3 106 aa8.8□□□□□ -1
SYNE1-204ENST00000367248 FAM222AQ5U5X8 452 aa8.8□□□□□ -1
SYNE1-204ENST00000367248 TLN2Q9Y4G6 2542 aa8.8□□□□□ -1
SYNE1-204ENST00000367248 LGALS9O00182 355 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms