RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 TPPP2P59282 170 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 RPL30P62888 115 aaKnown RBP-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 RPL10AP62906 217 aaKnown RBP-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 SYPL2Q5VXT5 272 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 CDRT4Q8N9R6 151 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 FER1L6-AS2Q96M78 137 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 LINC01587Q99440 93 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 C20orf24Q9BUV8 137 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 PRO1933Q9H354 126 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 SYNCQ9H7C4 482 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 R4GMQ9 66 aa-2.45□□□□□ -2.8
RNU6-228P-201ENST00000362700 EHBP1L1Q8N3D4 1523 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 LOC100506127A0A0U1RQW1 187 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 ARL5CA6NH57 179 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 B4DEV8 164 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 CTDSPLO15194 276 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 HPRT1P00492 218 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 APOA1P02647 267 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 HIST1H2AGP0C0S8 130 aaPredicted RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 ARMS2P0C7Q2 107 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 UBCP0CG48 685 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 HIST1H1DP16402 221 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 OGNP20774 298 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 MYL9P24844 172 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 ANP32AP39687 249 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 SLC1A1P43005 524 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 NCALDP61601 193 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 UBA52P62987 128 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 CUL4AQ13619 759 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 TSNQ15631 228 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 RHOHQ15669 191 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 CLLU1OSQ5K130 101 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 GBP6Q6ZN66 633 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 AHSA2Q719I0 299 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 TAS2R42Q7RTR8 314 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 PRNTQ86SH4 94 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 SPATA24Q86W54 205 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 HIST2H2ABQ8IUE6 130 aaPredicted RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 OR13C2Q8NGS9 318 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 OR6K3Q8NGY3 331 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 ANKRD7Q92527 254 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 HIST1H2ACQ93077 130 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 TSLPQ969D9 159 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 C12orf43Q96C57 262 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 ABHD14BQ96IU4 210 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 RARRES2Q99969 163 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 ANP32EQ9BTT0 268 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 MED18Q9BUE0 208 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 TMEM109Q9BVC6 243 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 TMEM165Q9HC07 324 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 MID1IP1Q9NPA3 183 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 FAIMQ9NVQ4 179 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 GHRLQ9UBU3 117 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 LSM2Q9Y333 95 aaKnown RBP-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 ASB4Q9Y574 426 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 NWD2Q9ULI1 1742 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 LRRC9Q6ZRR7 1453 aa-2.46□□□□□ -2.8
RNU6-228P-201ENST00000362700 DEFB131BA0A096LNP1 70 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 A0A1B0GW54 56 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 TMEM213A2RRL7 107 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 TMEM210A6NLX4 147 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 FABP5P3A8MUU1 101 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 C8orf87E5RJ46 101 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 GAS8O95995 478 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 H2AFXP16104 143 aaPredicted RBP-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 FCER1GP30273 86 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 CSN1S1P47710 185 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 PSMB3P49720 205 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 ATP6V0D1P61421 351 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 VSNL1P62760 191 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 SYCP1Q15431 976 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 RTL8BQ17RB0 113 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 CLLU1Q5K131 121 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 TPTE2P1Q5T6R2 138 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 C11orf88Q6PI97 169 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 TAC4Q86UU9 113 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 BAGE2Q86Y30 109 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 OR8H2Q8N162 312 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 SPICQ8N5J4 248 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 TMEM86BQ8N661 226 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 STAG3L4Q8TBR4 150 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 TRMT10AQ8TBZ6 339 aaKnown RBP-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 ASZ1Q8WWH4 475 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 CHCHD1Q96BP2 118 aaKnown RBP-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 C19orf60Q96EN9 201 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 CFAP53Q96M91 514 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 BOLA2Q9H3K6 86 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 EFCAB1Q9HAE3 211 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 C19orf12Q9NSK7 152 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 B9D1Q9UPM9 204 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 V9GYQ6 96 aa-2.47□□□□□ -2.8
RNU6-228P-201ENST00000362700 CCDC88BA6NC98 1476 aa-2.47□□□□□ -2.81
RNU6-228P-201ENST00000362700 RALGAPBQ86X10 1494 aa-2.47□□□□□ -2.81
RNU6-228P-201ENST00000362700 ALS2Q96Q42 1657 aa-2.47□□□□□ -2.81
RNU6-228P-201ENST00000362700 ABCC3O15438 1527 aa-2.47□□□□□ -2.81
RNU6-228P-201ENST00000362700 RRBP1Q9P2E9 1410 aaKnown RBP-2.48□□□□□ -2.81
RNU6-228P-201ENST00000362700 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.48□□□□□ -2.81
RNU6-228P-201ENST00000362700 C3orf85A0A1B0GTC6 90 aa-2.48□□□□□ -2.81
RNU6-228P-201ENST00000362700 CCDC69A6NI79 296 aa-2.48□□□□□ -2.81
RNU6-228P-201ENST00000362700 LRRC30A6NM36 301 aa-2.48□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms