RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 M0R381 172 aa11.36□□□□□ -0.59
UBAP1-202ENST00000359544 CENPVL3A0A0U1RRI6 287 aa11.36□□□□□ -0.59
UBAP1-202ENST00000359544 PPP1R17O96001 155 aa11.36□□□□□ -0.59
UBAP1-202ENST00000359544 BSPH1Q075Z2 132 aa11.36□□□□□ -0.59
UBAP1-202ENST00000359544 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
UBAP1-202ENST00000359544 PLCE1Q9P212 2302 aa11.36□□□□□ -0.59
UBAP1-202ENST00000359544 AKAP9Q99996 3911 aa11.35□□□□□ -0.59
UBAP1-202ENST00000359544 OTOGQ6ZRI0 2925 aa11.35□□□□□ -0.59
UBAP1-202ENST00000359544 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
UBAP1-202ENST00000359544 IGHV1-69DA0A0B4J2H0 117 aa11.35□□□□□ -0.59
UBAP1-202ENST00000359544 C11orf86A6NJI1 115 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 CCDC179H3BU77 68 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
UBAP1-202ENST00000359544 BUB3O43684 328 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 P0DMU3 169 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 FAM231AP0DMU4 169 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 FAM231CP0DMU5 169 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 HERV-K104P63124 156 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 C9orf47Q6ZRZ4 202 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 DPM3Q9P2X0 92 aa11.34□□□□□ -0.59
UBAP1-202ENST00000359544 IGLV4-69A0A075B6H9 119 aa11.33□□□□□ -0.6
UBAP1-202ENST00000359544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.33□□□□□ -0.6
UBAP1-202ENST00000359544 HES1Q14469 280 aa11.33□□□□□ -0.6
UBAP1-202ENST00000359544 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
UBAP1-202ENST00000359544 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.6
UBAP1-202ENST00000359544 CRYGDP07320 174 aa11.33□□□□□ -0.6
UBAP1-202ENST00000359544 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
UBAP1-202ENST00000359544 TRAV8-4A0A0B4J246 113 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 PMVKQ15126 192 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 ATXN8Q156A1 80 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 Q6ZS46 218 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 SMIM20Q8N5G0 67 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 LINC01600Q96MT4 127 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 CREBBPQ92793 2442 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
UBAP1-202ENST00000359544 Q8N1Y9 231 aa11.32□□□□□ -0.6
UBAP1-202ENST00000359544 NTN5Q8WTR8 489 aaPredicted RBP11.32□□□□□ -0.6
UBAP1-202ENST00000359544 A0A0B4J2C4 111 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 CRLF1O75462 422 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 IGHV3-33P01772 117 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
UBAP1-202ENST00000359544 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 LENEPQ9Y5L5 61 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 MYO9AB2RTY4 2548 aa11.31□□□□□ -0.6
UBAP1-202ENST00000359544 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
UBAP1-202ENST00000359544 MGPP08493 103 aa11.3□□□□□ -0.6
UBAP1-202ENST00000359544 ARL3P36405 182 aa11.3□□□□□ -0.6
UBAP1-202ENST00000359544 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
UBAP1-202ENST00000359544 NDPQ00604 133 aa11.3□□□□□ -0.6
UBAP1-202ENST00000359544 ANXA2RQ3ZCQ2 193 aa11.3□□□□□ -0.6
UBAP1-202ENST00000359544 UBTD1Q9HAC8 227 aa11.3□□□□□ -0.6
UBAP1-202ENST00000359544 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
UBAP1-202ENST00000359544 MRPL23Q16540 153 aaKnown RBP11.3□□□□□ -0.6
UBAP1-202ENST00000359544 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 S100A4P26447 101 aaKnown RBP11.29□□□□□ -0.6
UBAP1-202ENST00000359544 LINC01620Q4KN68 170 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
UBAP1-202ENST00000359544 TMEM263Q8WUH6 116 aaKnown RBP11.29□□□□□ -0.6
UBAP1-202ENST00000359544 A4D1N5 150 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 J3QQQ9 107 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 TMEM170BQ5T4T1 132 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 TP53TG1Q9Y2A0 90 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 PHLDA3Q9Y5J5 127 aa11.29□□□□□ -0.6
UBAP1-202ENST00000359544 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.28□□□□□ -0.6
UBAP1-202ENST00000359544 CLEC3BP05452 202 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 MED14OSP0DP75 135 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 FAM159AQ6UWV7 190 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 C15orf53Q8NAA6 179 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 ODF3Q96PU9 254 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 ZNF469Q96JG9 3925 aaPredicted RBP11.28□□□□□ -0.6
UBAP1-202ENST00000359544 IGIPA6NJ69 53 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 TSHBP01222 138 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 TIMM17AQ99595 171 aa11.28□□□□□ -0.6
UBAP1-202ENST00000359544 TRBV10-2A0A0K0K1G8 114 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 H3BMM0 161 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 Q6ZQT7 251 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 AMELXQ99217 191 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 IGHV3-66A0A0C4DH42 116 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 EMP1P54849 157 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 Q1RN00 199 aa11.27□□□□□ -0.61
UBAP1-202ENST00000359544 MDFICQ9P1T7 246 aa11.26□□□□□ -0.61
UBAP1-202ENST00000359544 PRR9Q5T870 116 aa11.26□□□□□ -0.61
UBAP1-202ENST00000359544 GPHB5Q86YW7 130 aa11.26□□□□□ -0.61
UBAP1-202ENST00000359544 LY6G5BQ8NDX9 201 aa11.26□□□□□ -0.61
UBAP1-202ENST00000359544 METTL26Q96S19 204 aa11.26□□□□□ -0.61
UBAP1-202ENST00000359544 TRAV2A0A0B4J234 112 aa11.25□□□□□ -0.61
UBAP1-202ENST00000359544 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
UBAP1-202ENST00000359544 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
UBAP1-202ENST00000359544 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
UBAP1-202ENST00000359544 LGALS9O00182 355 aa11.25□□□□□ -0.61
UBAP1-202ENST00000359544 CD3EP07766 207 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms