RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 LECT2O14960 151 aa14.16□□□□□ -0.14
SHANK1-202ENST00000359082 C4orf3Q8WVX3 66 aa14.16□□□□□ -0.14
SHANK1-202ENST00000359082 NLRC5Q86WI3 1866 aa14.15□□□□□ -0.14
SHANK1-202ENST00000359082 PROP1O75360 226 aa14.15□□□□□ -0.14
SHANK1-202ENST00000359082 C10orf105Q8TEF2 133 aa14.15□□□□□ -0.14
SHANK1-202ENST00000359082 ARFGEF3Q5TH69 2177 aa14.15□□□□□ -0.14
SHANK1-202ENST00000359082 H0Y9J4 135 aa14.15□□□□□ -0.14
SHANK1-202ENST00000359082 ABCA1O95477 2261 aa14.15□□□□□ -0.14
SHANK1-202ENST00000359082 LINC01620Q4KN68 170 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 TTTY13Q9BZ97 58 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 KLK12Q9UKR0 248 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 ATOX1O00244 68 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 FXYD2P54710 66 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 DIRC1Q969H9 104 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 TM2D2Q9BX73 214 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 IGKV1-17P01599 117 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 RNASE8Q8TDE3 154 aaKnown RBP14.14□□□□□ -0.15
SHANK1-202ENST00000359082 SPAG11BQ08648 103 aa14.14□□□□□ -0.15
SHANK1-202ENST00000359082 PI4KAP42356 2102 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 ADORA2A-AS1P86434 159 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 H3BQ85 93 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 TDRG1Q3Y452 100 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 RNF138Q8WVD3 245 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 RNF183Q96D59 192 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 KRTAP27-1Q3LI81 207 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 DOCK10Q96BY6 2186 aa14.13□□□□□ -0.15
SHANK1-202ENST00000359082 ZFP36P26651 326 aaKnown RBP14.12□□□□□ -0.15
SHANK1-202ENST00000359082 POLEQ07864 2286 aa14.12□□□□□ -0.15
SHANK1-202ENST00000359082 DIDO1Q9BTC0 2240 aaKnown RBP14.12□□□□□ -0.15
SHANK1-202ENST00000359082 J3KT08 172 aa14.12□□□□□ -0.15
SHANK1-202ENST00000359082 HIGD2BQ4VC39 106 aa14.12□□□□□ -0.15
SHANK1-202ENST00000359082 IGF2-ASQ6U949 168 aa14.12□□□□□ -0.15
SHANK1-202ENST00000359082 NCKAP5O14513 1909 aa14.12□□□□□ -0.15
SHANK1-202ENST00000359082 TEN1Q86WV5 123 aa14.12□□□□□ -0.15
SHANK1-202ENST00000359082 NUP210Q8TEM1 1887 aaPredicted RBP14.11□□□□□ -0.15
SHANK1-202ENST00000359082 TEX22C9J3V5 150 aa14.11□□□□□ -0.15
SHANK1-202ENST00000359082 Q8NFD4 153 aa14.11□□□□□ -0.15
SHANK1-202ENST00000359082 WFDC2Q14508 124 aa14.11□□□□□ -0.15
SHANK1-202ENST00000359082 TNRC6BQ9UPQ9 1833 aaKnown RBP14.11□□□□□ -0.15
SHANK1-202ENST00000359082 NFE4Q86UQ8 179 aa14.1□□□□□ -0.15
SHANK1-202ENST00000359082 MIR7-3HGQ8N6C7 128 aa14.1□□□□□ -0.15
SHANK1-202ENST00000359082 KLK5Q9Y337 293 aaPredicted RBP14.1□□□□□ -0.15
SHANK1-202ENST00000359082 TRBV12-3P01733 135 aa14.09□□□□□ -0.15
SHANK1-202ENST00000359082 C11orf86A6NJI1 115 aa14.09□□□□□ -0.15
SHANK1-202ENST00000359082 HEATR5AQ86XA9 2040 aa14.09□□□□□ -0.15
SHANK1-202ENST00000359082 MDFICQ9P1T7 246 aa14.09□□□□□ -0.15
SHANK1-202ENST00000359082 MYCNOSP40205 109 aa14.08□□□□□ -0.16
SHANK1-202ENST00000359082 CXCL5P42830 114 aa14.08□□□□□ -0.16
SHANK1-202ENST00000359082 Q8N7P7 452 aa14.08□□□□□ -0.16
SHANK1-202ENST00000359082 FAM167A-AS1Q96KT0 104 aa14.08□□□□□ -0.16
SHANK1-202ENST00000359082 SEC61GP60059 68 aa14.08□□□□□ -0.16
SHANK1-202ENST00000359082 B9D2Q9BPU9 175 aa14.08□□□□□ -0.16
SHANK1-202ENST00000359082 CEMP1Q6PRD7 247 aaPredicted RBP14.07□□□□□ -0.16
SHANK1-202ENST00000359082 IGFL2Q6UWQ7 119 aa14.07□□□□□ -0.16
SHANK1-202ENST00000359082 E9PLD3 99 aa14.07□□□□□ -0.16
SHANK1-202ENST00000359082 FOXI1Q12951 378 aa14.07□□□□□ -0.16
SHANK1-202ENST00000359082 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
SHANK1-202ENST00000359082 SPTBN1Q01082 2364 aaKnown RBP14.07□□□□□ -0.16
SHANK1-202ENST00000359082 JMJD7-PLA2G4BH0Y9G9 81 aa14.07□□□□□ -0.16
SHANK1-202ENST00000359082 TAX1BP3O14907 124 aa14.07□□□□□ -0.16
SHANK1-202ENST00000359082 CRYGBP07316 175 aa14.07□□□□□ -0.16
SHANK1-202ENST00000359082 TRBV10-2A0A0K0K1G8 114 aa14.06□□□□□ -0.16
SHANK1-202ENST00000359082 EP300Q09472 2414 aaPredicted RBP14.06□□□□□ -0.16
SHANK1-202ENST00000359082 E7EUB6 86 aa14.06□□□□□ -0.16
SHANK1-202ENST00000359082 ANAPC1Q9H1A4 1944 aa14.06□□□□□ -0.16
SHANK1-202ENST00000359082 K7EMT4 169 aa14.06□□□□□ -0.16
SHANK1-202ENST00000359082 SIRPDQ9H106 197 aa14.06□□□□□ -0.16
SHANK1-202ENST00000359082 SMAD5-AS1Q9Y6J3 95 aa14.06□□□□□ -0.16
SHANK1-202ENST00000359082 UNQ9165/PRO28630Q6UXU0 137 aa14.05□□□□□ -0.16
SHANK1-202ENST00000359082 IGKV2D-26A0A0A0MRZ7 120 aa14.05□□□□□ -0.16
SHANK1-202ENST00000359082 COX7BP24311 80 aa14.05□□□□□ -0.16
SHANK1-202ENST00000359082 HIGD1BQ9P298 99 aa14.05□□□□□ -0.16
SHANK1-202ENST00000359082 IGHV1-58A0A0C4DH39 117 aa14.05□□□□□ -0.16
SHANK1-202ENST00000359082 IGKV2-24A0A0C4DH68 120 aa14.05□□□□□ -0.16
SHANK1-202ENST00000359082 TMEM256-PLSCR3K7ERE1 68 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 GPHB5Q86YW7 130 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 ODF3L1Q8IXM7 274 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 CADP27708 2225 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 IGKV4-1P06312 121 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 MED14OSP0DP75 135 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 P0DMU3 169 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 FAM231AP0DMU4 169 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 FAM231CP0DMU5 169 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 SVIPQ8NHG7 77 aa14.04□□□□□ -0.16
SHANK1-202ENST00000359082 TMEM263Q8WUH6 116 aaKnown RBP14.04□□□□□ -0.16
SHANK1-202ENST00000359082 TP53TG3Q9ULZ0 132 aa14.03□□□□□ -0.16
SHANK1-202ENST00000359082 FAM110AQ9BQ89 295 aa14.03□□□□□ -0.16
SHANK1-202ENST00000359082 Q6ZUT4 128 aa14.03□□□□□ -0.16
SHANK1-202ENST00000359082 G3V4G9 280 aa14.03□□□□□ -0.16
SHANK1-202ENST00000359082 CTRLP40313 264 aa14.03□□□□□ -0.16
SHANK1-202ENST00000359082 MAP6D1Q9H9H5 199 aa14.02□□□□□ -0.16
SHANK1-202ENST00000359082 TRAV26-1A0A087WT03 109 aa14.01□□□□□ -0.17
SHANK1-202ENST00000359082 EML6Q6ZMW3 1958 aa14.01□□□□□ -0.17
SHANK1-202ENST00000359082 IGLV2-14P01704 120 aa14.01□□□□□ -0.17
SHANK1-202ENST00000359082 DOCK8Q8NF50 2099 aa14.01□□□□□ -0.17
SHANK1-202ENST00000359082 TRBV6-1A0A0K0K1D8 114 aa14□□□□□ -0.17
SHANK1-202ENST00000359082 FRMD6-AS1P0C7T7 363 aa14□□□□□ -0.17
SHANK1-202ENST00000359082 DNAJC9-AS1A6NH13 148 aa14□□□□□ -0.17
SHANK1-202ENST00000359082 ODF1Q14990 250 aa14□□□□□ -0.17
SHANK1-202ENST00000359082 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms