RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ZNF80P51504 273 aaPredicted RBP5.07□□□□□ -1.6
VPS13A-201ENST00000355766 TCL1AP56279 114 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 Q0VG73 95 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 ERCC8Q13216 396 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 NDUFAF3Q9BU61 184 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 TP53TG3Q9ULZ0 132 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 LAMTOR2Q9Y2Q5 125 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 C7orf71A4D174 169 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 NXPH4O95158 308 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 APCSP02743 223 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 ORM1P02763 201 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 PPBPP02775 128 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 FABP9Q0Z7S8 132 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 MRPL54Q6P161 138 aaKnown RBP5.06□□□□□ -1.6
VPS13A-201ENST00000355766 AMTNQ6UX39 209 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 TMEM191AQ9H0A3 160 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 MAP6D1Q9H9H5 199 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 SCRT2Q9NQ03 307 aa5.06□□□□□ -1.6
VPS13A-201ENST00000355766 LOC102724200A0A096LPH7 203 aaPredicted RBP5.05□□□□□ -1.6
VPS13A-201ENST00000355766 IGKV3D-20A0A0C4DH25 116 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 OR11H12B2RN74 326 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 H3BMM0 161 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 EDN2P20800 178 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 ASIPP42127 132 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 NUTF2P61970 127 aaKnown RBP5.05□□□□□ -1.6
VPS13A-201ENST00000355766 ODF1Q14990 250 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 TMEM256Q8N2U0 113 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 PTH2Q96A98 100 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 PGLYRP4Q96LB8 373 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 SORL1Q92673 2214 aa5.05□□□□□ -1.6
VPS13A-201ENST00000355766 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 IGKV3-7A0A075B6H7 116 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 NUPR2A6NF83 97 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 ARMS2P0C7Q2 107 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 SMIM6P0DI80 62 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 DEFB131AP59861 70 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 RAB4BP61018 213 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 SLAQ13239 276 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 ODF3L2Q3SX64 289 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 PRR9Q5T870 116 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 LYZL1Q6UWQ5 148 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 FAM159AQ6UWV7 190 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 SMIM15Q7Z3B0 74 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 ZFP82Q8N141 532 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 DEFB125Q8N687 156 aa5.04□□□□□ -1.6
VPS13A-201ENST00000355766 F6UB75 175 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 ZNF324O75467 553 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-201ENST00000355766 PPP1R17O96001 155 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 INSP01308 110 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 RAB4AP20338 218 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 TFPI2P48307 235 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 CAMPP49913 170 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 SNRPEP62304 92 aaKnown RBP5.03□□□□□ -1.6
VPS13A-201ENST00000355766 ANXA2RQ3ZCQ2 193 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 FAM104BQ5XKR9 115 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 MORN3Q6PF18 240 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-201ENST00000355766 TRPT1Q86TN4 253 aaKnown RBP5.03□□□□□ -1.6
VPS13A-201ENST00000355766 GTSCR1Q86UQ5 136 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 HIST3H2BBQ8N257 126 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 AP1S3Q96PC3 154 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 ALKBH7Q9BT30 221 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-201ENST00000355766 C1QTNF4Q9BXJ3 329 aa5.03□□□□□ -1.6
VPS13A-201ENST00000355766 IGHV1OR15-1A0A075B7D0 117 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 K7EMI3 77 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 M0R381 172 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 GZMBP10144 247 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 PMCHP20382 165 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 S100A4P26447 101 aaKnown RBP5.02□□□□□ -1.61
VPS13A-201ENST00000355766 S100A2P29034 98 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 SRIP30626 198 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 RNASE4P34096 147 aaKnown RBP5.02□□□□□ -1.61
VPS13A-201ENST00000355766 NDUFA6P56556 154 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 TWIST1Q15672 202 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 GDF5OSQ5U4N7 250 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 ORMDL3Q8N138 153 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 POM121L12Q8N7R1 296 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 TMEM18Q96B42 140 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 CHCHD1Q96BP2 118 aaKnown RBP5.02□□□□□ -1.61
VPS13A-201ENST00000355766 MRAP2Q96G30 205 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 C9orf85Q96MD7 179 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 GSN-AS1Q9NRJ2 163 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 PHLDA3Q9Y5J5 127 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 VPS13DQ5THJ4 4388 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 DNAH11Q96DT5 4516 aa5.02□□□□□ -1.61
VPS13A-201ENST00000355766 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
VPS13A-201ENST00000355766 FAT2Q9NYQ8 4349 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 IGHV3-16A0A0C4DH30 117 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 CRXO43186 299 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-201ENST00000355766 SPINK4O60575 86 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 ZNF705DP0CH99 300 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-201ENST00000355766 ZNF705BP0CI00 300 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-201ENST00000355766 NTF3P20783 257 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 SPANXN1Q5VSR9 72 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 LGALS9CQ6DKI2 356 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 CEMP1Q6PRD7 247 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-201ENST00000355766 BAGE3Q86Y29 109 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 STHQ8IWL8 128 aa5.01□□□□□ -1.61
VPS13A-201ENST00000355766 C18orf32Q8TCD1 76 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms