RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PLCE1Q9P212 2302 aa13.9□□□□□ -0.18
COL18A1-202ENST00000355480 TEX22C9J3V5 150 aa13.9□□□□□ -0.18
COL18A1-202ENST00000355480 KLK5Q9Y337 293 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-202ENST00000355480 TRBV7-3A0A075B6L6 115 aa13.9□□□□□ -0.18
COL18A1-202ENST00000355480 IGHV4-28A0A0C4DH34 117 aa13.89□□□□□ -0.19
COL18A1-202ENST00000355480 IGHG2P01859 326 aa13.89□□□□□ -0.19
COL18A1-202ENST00000355480 IFITM1P13164 125 aa13.89□□□□□ -0.19
COL18A1-202ENST00000355480 NDUFA1O15239 70 aa13.89□□□□□ -0.19
COL18A1-202ENST00000355480 IGLV1-47P01700 117 aa13.89□□□□□ -0.19
COL18A1-202ENST00000355480 UBE2AP49459 152 aa13.88□□□□□ -0.19
COL18A1-202ENST00000355480 SIRPDQ9H106 197 aa13.88□□□□□ -0.19
COL18A1-202ENST00000355480 TMEM89A2RUT3 159 aa13.88□□□□□ -0.19
COL18A1-202ENST00000355480 TM2D2Q9BX73 214 aa13.88□□□□□ -0.19
COL18A1-202ENST00000355480 C9orf47Q6ZRZ4 202 aa13.88□□□□□ -0.19
COL18A1-202ENST00000355480 Q6ZSR3 168 aa13.88□□□□□ -0.19
COL18A1-202ENST00000355480 SPANXDQ9BXN6 97 aa13.88□□□□□ -0.19
COL18A1-202ENST00000355480 DEFB1P60022 68 aa13.87□□□□□ -0.19
COL18A1-202ENST00000355480 LYPD6BQ8NI32 183 aa13.86□□□□□ -0.19
COL18A1-202ENST00000355480 RPL39P62891 51 aaKnown RBP13.86□□□□□ -0.19
COL18A1-202ENST00000355480 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
COL18A1-202ENST00000355480 NUP210Q8TEM1 1887 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-202ENST00000355480 DNAJC9-AS1A6NH13 148 aa13.86□□□□□ -0.19
COL18A1-202ENST00000355480 IGLL5B9A064 214 aa13.86□□□□□ -0.19
COL18A1-202ENST00000355480 VSIG2Q96IQ7 327 aa13.86□□□□□ -0.19
COL18A1-202ENST00000355480 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
COL18A1-202ENST00000355480 KLK12Q9UKR0 248 aa13.85□□□□□ -0.19
COL18A1-202ENST00000355480 NCR3O14931 201 aa13.85□□□□□ -0.19
COL18A1-202ENST00000355480 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
COL18A1-202ENST00000355480 OPRPNQ99935 248 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-202ENST00000355480 NPSP0C0P6 89 aa13.85□□□□□ -0.19
COL18A1-202ENST00000355480 Q8NA96 180 aa13.85□□□□□ -0.19
COL18A1-202ENST00000355480 FBXL19-AS1Q494R0 122 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 KMT2EQ8IZD2 1858 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 WISP2O76076 250 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 TRBV12-3P01733 135 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 INSL3P51460 131 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 ODF3L1Q8IXM7 274 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 FAM167A-AS1Q96KT0 104 aa13.84□□□□□ -0.19
COL18A1-202ENST00000355480 A6NDX4 124 aa13.83□□□□□ -0.19
COL18A1-202ENST00000355480 H0YGX0 51 aa13.83□□□□□ -0.19
COL18A1-202ENST00000355480 UNQ9165/PRO28630Q6UXU0 137 aa13.83□□□□□ -0.2
COL18A1-202ENST00000355480 FANCD2OSQ96PS1 177 aa13.83□□□□□ -0.2
COL18A1-202ENST00000355480 NDUFB1O75438 58 aa13.83□□□□□ -0.2
COL18A1-202ENST00000355480 DAND5Q8N907 189 aa13.83□□□□□ -0.2
COL18A1-202ENST00000355480 GAGE12HA6NDE8 117 aa13.82□□□□□ -0.2
COL18A1-202ENST00000355480 E7EUB6 86 aa13.82□□□□□ -0.2
COL18A1-202ENST00000355480 LINC01545Q5VT33 79 aa13.82□□□□□ -0.2
COL18A1-202ENST00000355480 CCL25O15444 150 aa13.82□□□□□ -0.2
COL18A1-202ENST00000355480 SPAG11BQ08648 103 aa13.82□□□□□ -0.2
COL18A1-202ENST00000355480 NCKAP5O14513 1909 aa13.82□□□□□ -0.2
COL18A1-202ENST00000355480 DEFB125Q8N687 156 aa13.82□□□□□ -0.2
COL18A1-202ENST00000355480 ATRXP46100 2492 aa13.81□□□□□ -0.2
COL18A1-202ENST00000355480 C4orf48Q5BLP8 95 aa13.81□□□□□ -0.2
COL18A1-202ENST00000355480 MSMPQ1L6U9 139 aa13.81□□□□□ -0.2
COL18A1-202ENST00000355480 LINC00173Q6ZV60 143 aa13.81□□□□□ -0.2
COL18A1-202ENST00000355480 A4D1N5 150 aa13.81□□□□□ -0.2
COL18A1-202ENST00000355480 GTSF1Q8WW33 167 aa13.81□□□□□ -0.2
COL18A1-202ENST00000355480 PROP1O75360 226 aa13.8□□□□□ -0.2
COL18A1-202ENST00000355480 LOXL1Q08397 574 aaPredicted RBP13.8□□□□□ -0.2
COL18A1-202ENST00000355480 TMEM263Q8WUH6 116 aaKnown RBP13.8□□□□□ -0.2
COL18A1-202ENST00000355480 MED14OSP0DP75 135 aa13.79□□□□□ -0.2
COL18A1-202ENST00000355480 MDFICQ9P1T7 246 aa13.79□□□□□ -0.2
COL18A1-202ENST00000355480 PRO0255Q9UI72 69 aa13.79□□□□□ -0.2
COL18A1-202ENST00000355480 Q6ZVH6 145 aa13.79□□□□□ -0.2
COL18A1-202ENST00000355480 A0A0J9YX75 114 aa13.79□□□□□ -0.2
COL18A1-202ENST00000355480 CXCL5P42830 114 aa13.78□□□□□ -0.2
COL18A1-202ENST00000355480 BAALCQ8WXS3 180 aa13.78□□□□□ -0.2
COL18A1-202ENST00000355480 MAP6D1Q9H9H5 199 aa13.78□□□□□ -0.2
COL18A1-202ENST00000355480 TNFRSF13BO14836 293 aaPredicted RBP13.78□□□□□ -0.2
COL18A1-202ENST00000355480 ANKRD39Q53RE8 183 aa13.78□□□□□ -0.2
COL18A1-202ENST00000355480 TOMM6Q96B49 74 aa13.77□□□□□ -0.2
COL18A1-202ENST00000355480 NOTCH2Q04721 2471 aa13.77□□□□□ -0.2
COL18A1-202ENST00000355480 RBM3P98179 157 aaKnown RBP13.77□□□□□ -0.21
COL18A1-202ENST00000355480 PRORYQ9H606 182 aa13.77□□□□□ -0.21
COL18A1-202ENST00000355480 IGLV2-14P01704 120 aa13.76□□□□□ -0.21
COL18A1-202ENST00000355480 NREPQ16612 68 aa13.76□□□□□ -0.21
COL18A1-202ENST00000355480 C11orf45Q8TAV5 145 aa13.76□□□□□ -0.21
COL18A1-202ENST00000355480 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
COL18A1-202ENST00000355480 CHKB-CPT1BH3BT56 60 aa13.76□□□□□ -0.21
COL18A1-202ENST00000355480 IL17DQ8TAD2 202 aa13.76□□□□□ -0.21
COL18A1-202ENST00000355480 LYPD6Q86Y78 171 aa13.75□□□□□ -0.21
COL18A1-202ENST00000355480 ACYP1P07311 99 aa13.75□□□□□ -0.21
COL18A1-202ENST00000355480 CTRLP40313 264 aa13.75□□□□□ -0.21
COL18A1-202ENST00000355480 NDUFA11Q86Y39 141 aa13.75□□□□□ -0.21
COL18A1-202ENST00000355480 TNCP24821 2201 aa13.75□□□□□ -0.21
COL18A1-202ENST00000355480 LMO4P61968 165 aa13.75□□□□□ -0.21
COL18A1-202ENST00000355480 HIVEP2P31629 2446 aa13.75□□□□□ -0.21
COL18A1-202ENST00000355480 LRRC75A-AS1Q8N1F1 130 aa13.74□□□□□ -0.21
COL18A1-202ENST00000355480 NACAE9PAV3 2078 aa13.74□□□□□ -0.21
COL18A1-202ENST00000355480 DENND4CQ5VZ89 1909 aa13.74□□□□□ -0.21
COL18A1-202ENST00000355480 DIRC1Q969H9 104 aa13.74□□□□□ -0.21
COL18A1-202ENST00000355480 NUPR1O60356 82 aa13.73□□□□□ -0.21
COL18A1-202ENST00000355480 TTC28Q96AY4 2481 aa13.73□□□□□ -0.21
COL18A1-202ENST00000355480 CITED1Q99966 193 aa13.73□□□□□ -0.21
COL18A1-202ENST00000355480 H3BQ85 93 aa13.72□□□□□ -0.21
COL18A1-202ENST00000355480 CCDC140Q96MF4 163 aa13.72□□□□□ -0.21
COL18A1-202ENST00000355480 MIR7-3HGQ8N6C7 128 aa13.72□□□□□ -0.21
COL18A1-202ENST00000355480 LECT2O14960 151 aa13.72□□□□□ -0.21
COL18A1-202ENST00000355480 WFDC11Q8NEX6 87 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms