RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 RPL27AP46776 148 aaKnown RBP4.02□□□□□ -1.77
CD47-201ENST00000355354 OR4B1Q8NGF8 309 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 PRSS3P2Q8NHM4 247 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 DYNLRB1Q9NP97 96 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 ZNF492Q9P255 531 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 SOCS3O14543 225 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 C5orf17Q8NAS9 161 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 HES1Q14469 280 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 Q6YL49 198 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 NTM-AS1Q6ZSK4 140 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 SIGLECL1Q8N7X8 197 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 FAM218AQ96MZ4 157 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 HIST1H1EP10412 219 aaKnown RBP4.01□□□□□ -1.77
CD47-201ENST00000355354 C5orf64Q2M2E5 130 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 LINC00596Q86U02 117 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 CEND1Q8N111 149 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 RPP21Q9H633 154 aaKnown RBP4.01□□□□□ -1.77
CD47-201ENST00000355354 SERTM2A0A1B0GWG4 89 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 EGFEM1PQ0D2K5 195 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 SPINK13Q1W4C9 94 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 FAM104BQ5XKR9 115 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 FER1L6-AS1Q8NA97 138 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 AP5S1Q9NUS5 200 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 NXPH4O95158 308 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 HBE1P02100 147 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 RPLP1P05386 114 aaKnown RBP4.01□□□□□ -1.77
CD47-201ENST00000355354 MSMBP08118 114 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 TMEM30BQ3MIR4 351 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 C19orf54Q5BKX5 351 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 TMEM70Q9BUB7 260 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 TNFRSF18Q9Y5U5 241 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 ODF3BA8MYP8 253 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 OXTP01178 125 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 SMDT1Q9H4I9 107 aa4.01□□□□□ -1.77
CD47-201ENST00000355354 TRBV7-3A0A075B6L6 115 aa4□□□□□ -1.77
CD47-201ENST00000355354 ELOA3CA0A087WX78 387 aaPredicted RBP4□□□□□ -1.77
CD47-201ENST00000355354 EBI3Q14213 229 aa4□□□□□ -1.77
CD47-201ENST00000355354 CCDC144NLQ6NUI1 221 aa4□□□□□ -1.77
CD47-201ENST00000355354 DCANP1Q8TF63 244 aa4□□□□□ -1.77
CD47-201ENST00000355354 PDE6DO43924 150 aa4□□□□□ -1.77
CD47-201ENST00000355354 TNFRSF6BO95407 300 aa4□□□□□ -1.77
CD47-201ENST00000355354 SS18Q15532 418 aa4□□□□□ -1.77
CD47-201ENST00000355354 CD300EQ496F6 205 aaPredicted RBP4□□□□□ -1.77
CD47-201ENST00000355354 C8orf86Q6ZUL3 223 aa4□□□□□ -1.77
CD47-201ENST00000355354 SHANK2-AS3Q9BTD1 123 aa4□□□□□ -1.77
CD47-201ENST00000355354 A0A0J9YXV3 536 aa4□□□□□ -1.77
CD47-201ENST00000355354 DNAJC9-AS1A6NH13 148 aa4□□□□□ -1.77
CD47-201ENST00000355354 KIR2DS2P43631 304 aa4□□□□□ -1.77
CD47-201ENST00000355354 LITAFQ99732 161 aa4□□□□□ -1.77
CD47-201ENST00000355354 CSTL1Q9H114 145 aa4□□□□□ -1.77
CD47-201ENST00000355354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4□□□□□ -1.77
CD47-201ENST00000355354 TRBV9A0A0B4J1U6 114 aa4□□□□□ -1.77
CD47-201ENST00000355354 TRAV8-4A0A0B4J246 113 aa4□□□□□ -1.77
CD47-201ENST00000355354 TRAV4A0A0B4J268 109 aa4□□□□□ -1.77
CD47-201ENST00000355354 H3BRN7 92 aa4□□□□□ -1.77
CD47-201ENST00000355354 COX7A2P2O60397 106 aa4□□□□□ -1.77
CD47-201ENST00000355354 NPFFR1Q9GZQ6 430 aa4□□□□□ -1.77
CD47-201ENST00000355354 ZMAT4Q9H898 229 aa4□□□□□ -1.77
CD47-201ENST00000355354 KAAG1Q9UBP8 84 aa4□□□□□ -1.77
CD47-201ENST00000355354 GCSHP23434 173 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 RPEL1Q2QD12 228 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 RAX2Q96IS3 184 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 C17orf112F2Z3M2 114 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 HNRNPA3P51991 378 aaKnown RBP3.99□□□□□ -1.77
CD47-201ENST00000355354 FAM231DQ6ZW35 169 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 TMEM86BQ8N661 226 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 COX8AP10176 69 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 MFAP4P55083 255 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 VAMP3Q15836 100 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 TSSC4Q9Y5U2 329 aaPredicted RBP3.99□□□□□ -1.77
CD47-201ENST00000355354 TRAV12-3A0A0B4J271 114 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 SRP14P37108 136 aaKnown RBP3.99□□□□□ -1.77
CD47-201ENST00000355354 RTL8BQ17RB0 113 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 LRRC10Q5BKY1 277 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
CD47-201ENST00000355354 LINC00482Q8N8I6 264 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 SMCR5Q8TEV8 140 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
CD47-201ENST00000355354 TRBV20-1A0A075B6N2 111 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 TEX49A0A1B0GTD5 131 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 A0A1B0GUT8 65 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 A8MU10 97 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 BMI1P35226 326 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 IGHV1OR15-1A0A075B7D0 117 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 TRAV26-1A0A087WT03 109 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 H3BUX3 64 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 ORM1P02763 201 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 HBBP68871 147 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 SUB1P53999 127 aaKnown RBP eCLIP3.98□□□□□ -1.772e-7■□□□□ 11.2
CD47-201ENST00000355354 PIMREGQ9BSJ6 248 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 APOA2P02652 100 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 SLURP1P55000 103 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 FAM74A4Q5TZK3 123 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 RBPMS2Q6ZRY4 209 aaKnown RBP3.98□□□□□ -1.77
CD47-201ENST00000355354 ZNF502Q8TBZ5 544 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 IFI27L1Q96BM0 104 aa3.98□□□□□ -1.77
CD47-201ENST00000355354 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 IGIPA6NJ69 53 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 PDPNQ86YL7 162 aa3.97□□□□□ -1.77
CD47-201ENST00000355354 WFDC9Q8NEX5 89 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms