RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 CDKN1BP46527 198 aa8.28□□□□□ -1.08
CDRT1-202ENST00000354433 TWIST1Q15672 202 aa8.28□□□□□ -1.08
CDRT1-202ENST00000354433 FAM104BQ5XKR9 115 aa8.28□□□□□ -1.08
CDRT1-202ENST00000354433 CELA1Q9UNI1 258 aa8.28□□□□□ -1.08
CDRT1-202ENST00000354433 KMT2AQ03164 3969 aa8.28□□□□□ -1.08
CDRT1-202ENST00000354433 AMBPP02760 352 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 FABP4P15090 132 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 ASIPP42127 132 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 TCTAP57738 103 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 TDRG1Q3Y452 100 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 PDZD11Q5EBL8 140 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 AMTNQ6UX39 209 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 TMEM256Q8N2U0 113 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 ZNF324O75467 553 aaPredicted RBP8.27□□□□□ -1.09
CDRT1-202ENST00000354433 SERF1AO75920 110 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 LINC00310P59036 64 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 ANXA2RQ3ZCQ2 193 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 FAM159AQ6UWV7 190 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 OR10D4PQ8NGN7 298 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 SCRT2Q9NQ03 307 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 GOLT1BQ9Y3E0 138 aa8.27□□□□□ -1.09
CDRT1-202ENST00000354433 DEFB131BA0A096LNP1 70 aa8.26□□□□□ -1.09
CDRT1-202ENST00000354433 J3KRW8 73 aa8.26□□□□□ -1.09
CDRT1-202ENST00000354433 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
CDRT1-202ENST00000354433 Q6ZQT7 251 aa8.26□□□□□ -1.09
CDRT1-202ENST00000354433 SMIM15Q7Z3B0 74 aa8.26□□□□□ -1.09
CDRT1-202ENST00000354433 TMEM208Q9BTX3 173 aa8.26□□□□□ -1.09
CDRT1-202ENST00000354433 NAGKQ9UJ70 344 aa8.26□□□□□ -1.09
CDRT1-202ENST00000354433 BIRC6Q9NR09 4857 aa8.26□□□□□ -1.09
CDRT1-202ENST00000354433 MUC4Q99102 2169 aa8.25□□□□□ -1.09
CDRT1-202ENST00000354433 NUPR1O60356 82 aa8.25□□□□□ -1.09
CDRT1-202ENST00000354433 PPBPP02775 128 aa8.25□□□□□ -1.09
CDRT1-202ENST00000354433 S100A4P26447 101 aaKnown RBP8.25□□□□□ -1.09
CDRT1-202ENST00000354433 KIR3DS1Q14943 382 aa8.25□□□□□ -1.09
CDRT1-202ENST00000354433 C12orf74Q32Q52 190 aa8.25□□□□□ -1.09
CDRT1-202ENST00000354433 APLNQ9ULZ1 77 aa8.25□□□□□ -1.09
CDRT1-202ENST00000354433 TRAV12-3A0A0B4J271 114 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 SMIM9A6NGZ8 99 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 H3BVH4 76 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 SPART-AS1P0CW21 52 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
CDRT1-202ENST00000354433 ORMDL3Q8N138 153 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 OR10AG1Q8NH19 301 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
CDRT1-202ENST00000354433 C20orf144Q9BQM9 153 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 LAMTOR2Q9Y2Q5 125 aa8.24□□□□□ -1.09
CDRT1-202ENST00000354433 NXPH4O95158 308 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 RNASE3P12724 160 aaKnown RBP8.23□□□□□ -1.09
CDRT1-202ENST00000354433 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 MUC21Q5SSG8 566 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 SPANXN1Q5VSR9 72 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 AMN1Q8IY45 258 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 C12orf57Q99622 126 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 PHLDA3Q9Y5J5 127 aa8.23□□□□□ -1.09
CDRT1-202ENST00000354433 IGHV1OR15-1A0A075B7D0 117 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 TEX48A0A1B0GUV7 120 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 M0R2Z0 102 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 RAB4AP20338 218 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 IQCJQ1A5X6 159 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 FAM222AQ5U5X8 452 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 NIT1Q86X76 327 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 LINC00467Q9BRT7 94 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 NDUFAF3Q9BU61 184 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 SAMD10Q9BYL1 202 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 MSRB1Q9NZV6 116 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 TRGV11A0A075B6L2 103 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 GNRH2O43555 120 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 INSP01308 110 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 HTN3P15516 51 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 PMCHP20382 165 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 JOSD1Q15040 202 aaPredicted RBP8.22□□□□□ -1.09
CDRT1-202ENST00000354433 C1orf158Q8N1D5 194 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 RNF185Q96GF1 192 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 PRELID3AQ96N28 172 aa8.22□□□□□ -1.09
CDRT1-202ENST00000354433 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.09
CDRT1-202ENST00000354433 TRAV12-2A0A075B6T6 113 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 IGHV3-16A0A0C4DH30 117 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 D6R8Y8 96 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 CRXO43186 299 aaPredicted RBP8.21□□□□□ -1.1
CDRT1-202ENST00000354433 HSBP1O75506 76 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 LINC00614P0C842 121 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 CKS2P33552 79 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 SSTP61278 116 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 PYY3Q5JQD4 70 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 C9orf85Q96MD7 179 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 DKK2Q9UBU2 259 aa8.21□□□□□ -1.1
CDRT1-202ENST00000354433 AMTP48728 403 aa8.2□□□□□ -1.1
CDRT1-202ENST00000354433 RNASEKQ6P5S7 137 aaKnown RBP8.2□□□□□ -1.1
CDRT1-202ENST00000354433 URB1-AS1Q96HZ7 61 aa8.2□□□□□ -1.1
CDRT1-202ENST00000354433 P0DMU3 169 aa8.19□□□□□ -1.1
CDRT1-202ENST00000354433 FAM231AP0DMU4 169 aa8.19□□□□□ -1.1
CDRT1-202ENST00000354433 FAM231CP0DMU5 169 aa8.19□□□□□ -1.1
CDRT1-202ENST00000354433 EVI2AP22794 236 aa8.19□□□□□ -1.1
CDRT1-202ENST00000354433 DAD1P61803 113 aa8.19□□□□□ -1.1
CDRT1-202ENST00000354433 MRAP2Q96G30 205 aa8.19□□□□□ -1.1
CDRT1-202ENST00000354433 AP1S3Q96PC3 154 aa8.19□□□□□ -1.1
CDRT1-202ENST00000354433 DPH3P1Q9H4G8 78 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms