RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 GTF3C1Q12789 2109 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 IGHV1-58A0A0C4DH39 117 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 FAM236DA0A1B0GTK5 79 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 IGLV2-23P01705 113 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 FAM236CP0DP71 79 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 EP300Q09472 2414 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-202ENST00000345356 MRPS12O15235 138 aaKnown RBP9.33□□□□□ -0.92
COL12A1-202ENST00000345356 XCL1P47992 114 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 NSUN5P1Q3KNT7 163 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 WFDC9Q8NEX5 89 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 COLQQ9Y215 455 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-202ENST00000345356 ZNF80P51504 273 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-202ENST00000345356 MIAQ16674 131 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 ALPK3Q96L96 1907 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 DYSFO75923 2080 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
COL12A1-202ENST00000345356 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 ZGRF1Q86YA3 2104 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 DSCAML1Q8TD84 2053 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 DAZ2Q13117 558 aaKnown RBP9.32□□□□□ -0.92
COL12A1-202ENST00000345356 DAZ4Q86SG3 579 aaKnown RBP9.32□□□□□ -0.92
COL12A1-202ENST00000345356 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 NEXN-AS1Q8NBZ9 246 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 DAZ3Q9NR90 486 aaKnown RBP9.32□□□□□ -0.92
COL12A1-202ENST00000345356 A0A0J9YY99 117 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 C9orf47Q6ZRZ4 202 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 MALRD1Q5VYJ5 2156 aa9.32□□□□□ -0.92
COL12A1-202ENST00000345356 LY6G6EA0A0G2JKS1 128 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 U3KQA8 63 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 U3KQE9 123 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 V9GYY9 64 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 ANAPC1Q9H1A4 1944 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 B4DSR2 109 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 Q6ZS92 163 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 SVIPQ8NHG7 77 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 FRMPD3Q5JV73 1810 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 TRIAP1O43715 76 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 MPLKIPQ8TAP9 179 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 VSIG2Q96IQ7 327 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 BRWD3Q6RI45 1802 aa9.31□□□□□ -0.92
COL12A1-202ENST00000345356 COX7A2LO14548 114 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 MED13Q9UHV7 2174 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 P0DMU3 169 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 PROP1O75360 226 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 PRR30Q53SZ7 412 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-202ENST00000345356 IGHV4-4A0A075B6R2 117 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 C10orf105Q8TEF2 133 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 HIST2H2BCQ6DN03 193 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 C20orf203Q8NBC4 194 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
COL12A1-202ENST00000345356 MED14OSP0DP75 135 aa9.29□□□□□ -0.92
COL12A1-202ENST00000345356 CACNA1BQ00975 2339 aa9.29□□□□□ -0.92
COL12A1-202ENST00000345356 IGHV3-33P01772 117 aa9.29□□□□□ -0.92
COL12A1-202ENST00000345356 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
COL12A1-202ENST00000345356 DEFB105AQ8NG35 78 aa9.29□□□□□ -0.92
COL12A1-202ENST00000345356 NPBQ8NG41 125 aa9.29□□□□□ -0.92
COL12A1-202ENST00000345356 U3KQK5 164 aa9.29□□□□□ -0.92
COL12A1-202ENST00000345356 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
COL12A1-202ENST00000345356 ANGP03950 147 aaKnown RBP9.28□□□□□ -0.92
COL12A1-202ENST00000345356 TNRC6BQ9UPQ9 1833 aaKnown RBP9.28□□□□□ -0.92
COL12A1-202ENST00000345356 IGHV4-28A0A0C4DH34 117 aa9.28□□□□□ -0.92
COL12A1-202ENST00000345356 LINC01619G3V211 115 aa9.28□□□□□ -0.92
COL12A1-202ENST00000345356 A0A096LPF7 62 aa9.28□□□□□ -0.92
COL12A1-202ENST00000345356 NREPQ16612 68 aa9.28□□□□□ -0.92
COL12A1-202ENST00000345356 TRBV12-3P01733 135 aa9.28□□□□□ -0.92
COL12A1-202ENST00000345356 MIR7-3HGQ8N6C7 128 aa9.28□□□□□ -0.92
COL12A1-202ENST00000345356 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.92
COL12A1-202ENST00000345356 LRRC75A-AS1Q8N1F1 130 aa9.27□□□□□ -0.93
COL12A1-202ENST00000345356 DEFB1P60022 68 aa9.27□□□□□ -0.93
COL12A1-202ENST00000345356 IMUPQ9GZP8 106 aa9.27□□□□□ -0.93
COL12A1-202ENST00000345356 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL12A1-202ENST00000345356 CEMP1Q6PRD7 247 aaPredicted RBP9.26□□□□□ -0.93
COL12A1-202ENST00000345356 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
COL12A1-202ENST00000345356 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
COL12A1-202ENST00000345356 CRIP1P50238 77 aa9.26□□□□□ -0.93
COL12A1-202ENST00000345356 EIF4EBP1Q13541 118 aaPredicted RBP9.26□□□□□ -0.93
COL12A1-202ENST00000345356 NOP10Q9NPE3 64 aaKnown RBP9.26□□□□□ -0.93
COL12A1-202ENST00000345356 MDFICQ9P1T7 246 aa9.26□□□□□ -0.93
COL12A1-202ENST00000345356 COX7CP15954 63 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 F5H768 121 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 HIST2H2BDQ6DRA6 164 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 SERP2Q8N6R1 65 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 FAM215AQ9Y5M1 114 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 NCOA6Q14686 2063 aaPredicted RBP9.25□□□□□ -0.93
COL12A1-202ENST00000345356 HOXB4P17483 251 aaPredicted RBP9.25□□□□□ -0.93
COL12A1-202ENST00000345356 MRPL55Q7Z7F7 128 aaKnown RBP9.25□□□□□ -0.93
COL12A1-202ENST00000345356 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 RNF185Q96GF1 192 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 MED13LQ71F56 2210 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 IGHV3-30P01768 117 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 IGHV3-30-5P0DP03 117 aa9.25□□□□□ -0.93
COL12A1-202ENST00000345356 THSD7BQ9C0I4 1608 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 H3BUA1 57 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 MP68P56378 58 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms